mRNA_P-fluviatile_contig10.679.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig10.679.1
Unique NamemRNA_P-fluviatile_contig10.679.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: D8LTR6_ECTSI (Developmental regulator FlbA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR6_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.230e-117
Identity = 209/436 (47.94%), Postives = 274/436 (62.84%), Query Frame = 1 
Query:    1 AFDWVMLTLAIIFACSCFGYIAMLWSMRRNFFIIIRSPKLACALGLSVTLRCLAKMFEFTVLWSPSS-PEGEPIISLMTFPAMLTVALALIMTAIRLLIMYYPSKAANWRRYSREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERRRSTVELLLVTPMLRRRSSTLGNGNAVVPAVAEPGRN----RGHAS-DEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEVSADESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEG 1290
            A D  +L  A +++  C G+IA +WS+RRNFFI++RSP LAC LGL +TLR    +F  T+ W  S       + +++ FP +L    AL+M+A+RLL+M++P   A W R++RE  LV  LV   + +  ALWS  A  GV R   VL TL   S    +   V +G  L KV+D  +MS DIR++G  LL + C+ A +  + M     KYY IV + +SHPPIVW+  +RPVR V R IP RRRS  +  L +P   RR ST    N  V   A+   N     G    D++RL  IM + PLREAFGEFCRRSLC ESFQFL+DV EFK  + + +A+E+ K+ G  GFG Y A+VNDYIKDGSHSEVNI   TKR I+++ KF AYA+L L+ R++IF  AE+EIK +L DNLLNKFL S  Y +VVDFEG
Sbjct:    9 AIDIFILAAATVYSFVCLGFIAAMWSLRRNFFIVLRSPLLACTLGLCITLRFEFLLFAHTLHWGHSGLVASHGVTNMIEFPVLLISEFALVMSAVRLLVMFFPKLRAKWGRFTREKDLVYGLVCAYILMEGALWSGVAAVGVSRTGGVLATLELFSGSTTVVAGVLVGGRLNKVDDLLHMSTDIRVVGMLLLLMSCVHAGLHYVSMSPMEYKYYTIVLMALSHPPIVWLTNIRPVREVERNIPARRRSRKDFQLPSPY--RRWSTK---NIRVGVAADENNNSLPWNGEVYLDDNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFKDLIADSAAEETEKSFG--GFGGYLAVVNDYIKDGSHSEVNIASTTKRSIMQHMKFTAYAALKLEDRKDIFGPAEREIKIVLADNLLNKFLVSDPYTKVVDFEG 437
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: A0A6H5KX00_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX00_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 1.270e-113
Identity = 200/431 (46.40%), Postives = 266/431 (61.72%), Query Frame = 1 
Query:    1 AFDWVMLTLAIIFACSCFGYIAMLWSMRRNFFIIIRSPKLACALGLSVTLRCLAKMFEFTVLWSPSS-PEGEPIISLMTFPAMLTVALALIMTAIRLLIMYYPSKAANWRRYSREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERRRSTVELLLVTPMLRRRSSTLGNGNAVVPAVAEPGRNRGHASDEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEVSADESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEG 1290
            A D  +L  A +++  C G++A +WS+RRNFFI++RSP LAC LGL +TLR    +F  T+ W  S     + + SL+ FPA+L    AL+M+A+RLL+M++P   A W R++RE  LV  LV   + +  ALWS  A  G+ R   VL TL   +    +   V LG  L KV+D  +MS DIR++G  LL + C+   +  + M     +Y  I    + HPPIVW+  +RPV  V R IP RRRS     L +P  RR +  +  G A    +     N     +++RL  IM + PLREAFGEFCRRSLC ESFQFL+DV EFK  + + +A+ S K+ G  GFG Y AIVNDYIKDGSHSEVNI   TKR I++Y KF AYA+L L+ R+++F  AE+EIK +L DNLLNKFL S  Y +VVDFEG
Sbjct:    9 AIDIFILAAATVYSFVCLGFVAAMWSLRRNFFIVLRSPLLACTLGLCITLRFEVLIFAHTLHWGHSGLVASDGVTSLIEFPALLISEFALVMSAVRLLVMFFPKLRAKWGRFTRERDLVYGLVCAYILMEGALWSGVAAVGLSRTVGVLVTLELFTGSTTVVAGVLLGGRLNKVDDLLHMSTDIRVVGTILLLMTCVHKGLPYLSMSPTEYQYCKITLTALLHPPIVWLINIRPVLEVGRNIPARRRSRKSFHLPSPFRRRSTKNIRVGVAADEDINTLPWNGEAYLNDNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFKDLIADSAAETSEKSFG--GFGGYLAIVNDYIKDGSHSEVNIASTTKRSIMQYMKFAAYAALQLEERKDLFGPAEREIKIVLADNLLNKFLVSDPYTKVVDFEG 437
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: A0A6H5JIZ3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ3_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 1.440e-105
Identity = 192/444 (43.24%), Postives = 277/444 (62.39%), Query Frame = 1 
Query:    7 DWVMLTLAIIFACSCFGYIAMLWSMRRNFFIIIRSPKLACALGLSVTLRCLAKMFEFTVLWSPSSPEGEPIISLMTFPAMLTVALALIMTAIRLLIMYYPSKAANWRRYSREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERRRSTVELLLVTPMLRRRSSTLGN--GNAVVPAVAE-PGRN-RGHASDEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEV--------SADESNKN-TGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEGRSQ 1299
            D ++L  +  +A    GY+A +W +R+NFFI++RSP LAC  GL +T+R +  ++   +           I++L+ FPA+L   +A+I+TA+RL +MYYPS  A + R +RE      L    + + + +W AAA+QG +RVA V+  L+PLSA + +   V LG++LK++ D SNM  DIRL+G  LL  L +  A++ +     A KY+ ++F+ +SHPPIVWI  +RP++ VL   P         +L+    RRR        G AV P V++ P R+ R    + +RLAGIM YLPLREAFGEFC++SLCSESFQFLLD SEF+  ++E         SA+E N+  T   G G    +VN+YIKDG+ SE+NI   TKRDI++ AK +A+ASLD D R  IF  AE+EI+++L DNL+ +FL+SAQYK  VD +G  +
Sbjct:    9 DALILVFSSAYALISLGYVATMWHLRKNFFIVLRSPILACTSGLGITVRYIVTIYGLVL------GRNLEILNLIGFPALLIAEIAVILTALRLFVMYYPSTRAKYGRVTREKPWACGLAATYLLVEMVVWLAAAMQGTKRVAVVMTNLAPLSAFVTLMAVVCLGRQLKRIHDLSNMGRDIRLVGIILLICLPVFTAIRVLWGSILAFKYFFVIFITISHPPIVWILNIRPIQEVLHHAPRNSIPKGVQVLLALSSRRRGGITSTIVGEAVTPDVSQNPSRHSRESYVESNRLAGIMNYLPLREAFGEFCQKSLCSESFQFLLDASEFRGVIVEGPVDGDANGSAEEENEAPTHTSGLGDVATMVNEYIKDGAPSEINIGSDTKRDIMELAKVEAFASLDQDARLLIFVQAEREIRRILEDNLMARFLASAQYKRAVDGDGHGR 446
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: D7G0P5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P5_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.960e-65
Identity = 135/297 (45.45%), Postives = 184/297 (61.95%), Query Frame = 1 
Query:  451 LSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERR-RSTVELLLVTPMLRR--RSSTLGNGNAVVPAVAEPGRNRGHAS--DEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEV--------SADESNKN-TGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEGRSQ 1299
            L P+S  I I   V LG++LK++ D SNM  DIRL+G  LL  + +  A+Q + +   A KY+++V + +SHP IVWI  +RP++ VL   P       V++LL     RR   SS +G G AV   V +     G  S  D +RLAGIM YLPLREAFGEFC++S CSE   FLLD SEF+  ++E         SA+E N+  T   G G   A+VN+YIKDG+ SE+NI   TK DI++ AK +A+ SLD D R+ IF  AE+EI+++L DNL+ +FL+SAQYK  VD +G  +
Sbjct:    4 LDPVSVFITITAVVCLGRQLKRIHDLSNMGRDIRLVGIILLICVPVFTAIQVLPLSTLAFKYFSVVSMTLSHPAIVWILNIRPIQEVLHHAPRNSIPKGVQMLLALSSRRRGGSSSAIG-GEAVTTDVTQNPSQHGRESYVDSNRLAGIMNYLPLREAFGEFCQKSFCSE---FLLDASEFRGVIVEGPVEGDANGSAEEENEAPTRTSGLGDVAAMVNEYIKDGAPSEINIGSDTKHDIMELAKVEAFTSLDQDARRLIFGKAEREIRRILEDNLMARFLASAQYKRAVDGDGHGR 296
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: D7G0P6_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P6_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 6.840e-60
Identity = 161/457 (35.23%), Postives = 216/457 (47.26%), Query Frame = 1 
Query:    7 DWVMLTLAIIFACSCFGYIAMLWSMRRNFFIIIRSPKLACALGLSVTLRCLAKMFEFTVLWSPSSPEGEPIISLMTFPAMLTVALALIMTAIRLLIMYYPSKAANWRRYSREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERR-RSTVELLLVTPMLRR--RSSTLGNGNAVVPAVAEPGRNRGHAS--DEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEV--------SADESNKNTGFM-GFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASL---------------DLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEG 1290
            D V+L  A  +A    GYIA +W +R+NFFI++RSP LAC  GL +T+R    M+   V           I++L+ FPA+    +AL++TA+RL +MYYPS  A + R +RE      L    + +   +W A A QG ER                                                                      NI                RP++ VL   P       V++LL     RR   SS +G G AV   V +     G  S  D +RLAGIM YLPLREAFGEFC++SLCSESFQFLLD SEF+  ++E         SA+E N+      G G   A+VN+YIKDG+ SE+NI   TK  I++ AK +A+ASL               D D R+ IF  AE+EI+++L DNL+ +FL+SAQYK  VD +G
Sbjct:    9 DAVILVFASAYALISLGYIATMWHLRKNFFIVLRSPILACTSGLGITVRYTVTMYGLVV------GRNLEILNLVGFPALWIAEIALVLTALRLFVMYYPSTRAKYGRVTREKPWACGLAATYLLVETVVWLAGAAQGTER----------------------------------------------------------------------NI----------------RPIQEVLHHAPRNSIPKGVQMLLALSSRRRGGSSSPIG-GEAVTTDVTQNPSQHGRESYVDSNRLAGIMNYLPLREAFGEFCQKSLCSESFQFLLDASEFRGVIVEGPVEGDANGSAEEENEAPAHTSGLGDVAAMVNEYIKDGAPSEINIGSDTKHAIMELAKVEAFASLEQGRQGGRLEAFALLDQDARKLIFVKAEREIRRILEDNLMARFLASAQYKRAVDGDG 372
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: A0A6H5J8W8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8W8_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 8.120e-52
Identity = 143/402 (35.57%), Postives = 188/402 (46.77%), Query Frame = 1 
Query:  109 SPKLACALGLSVTLRCLAKMFEFTVLWSPSSPEGEPIISLMTFPAMLTVALALIMTAIRLLIMYYPSKAANWRRYSREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERRRSTVELLLVTPMLRRRSSTLGNGNAVVPAVAEPGRN-RGHASDEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEVSAD-------ESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEG 1290
            SP LAC  G  +TLR    M+   V           I++++ FPA+    +ALIMTA+RL +MYYPS  A + R +RE      L    + +   +W AAA QG+ER       + P+  V+  A    + K                  G  +L  L  RA                                             RRRST              ST+G           P ++ R    D +RLAGIM YLPLREAFGEFC++SLCSESFQFLLD SEF+  ++E   D       E          G    +VN+YIKDG+ SE+NI   TK DI++ AK +A+ASLD D R+ IF  AE+EIK++L DNL+ +FL SAQYK  VD +G
Sbjct:   29 SPILACTSGFGITLRYTLTMYGLVV-------GNLEILNVVGFPALWIAEIALIMTALRLFVMYYPSTRAKYGRVTREKPWTCGLAATYLLVETVVWLAAAAQGIER------NIRPIQEVLYHARRNGIPK------------------GVQMLLALSSRA---------------------------------------------RRRST--------------STIGGEEVTSDVTQNPSQHSREPYIDSNRLAGIMNYLPLREAFGEFCQKSLCSESFQFLLDASEFRGVIVEGPVDGDANGSAEEENEAPTRRLGDVATMVNEYIKDGAPSEINIGSDTKHDIMELAKAEAFASLDQDARKLIFVKAEREIKRILEDNLMARFLVSAQYKRAVDGDG 340
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: A0A6H5JD29_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD29_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.080e-43
Identity = 102/214 (47.66%), Postives = 131/214 (61.21%), Query Frame = 1 
Query:  691 LRPVRSVLRQIPERR-RSTVELLLVTPMLRRRSSTLGNGNAVVPAVAE-PGRN-RGHASDEHRLAGIMGYLPLREAFGEFCRRSLCSE-----SFQFLLDVSEFKIHVLEVSAD---------ESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVD 1281
            +RP++ VL   P       V++LL     RRRSS    G AV   V   P R+ R    D +RLAG+M YLPLREAFGEFC++SLCSE     SF+FLLD S+FK  ++E   D         E    T   G G   A+VN+YIKDG+ SE+NI   TK DI++ AK +A+ASLD D R+ IF  AE+EIK +L DN++ +FL+SAQYK  VD
Sbjct:   29 IRPIQEVLHHAPRNSIPKGVQMLLALSSRRRRSSAAIGGEAVTADVTHNPSRHSRESYVDSNRLAGLMNYLPLREAFGEFCQKSLCSEISRCVSFRFLLDASKFKGVIVEGPVDGDANGSAEEEIEAPTHTSGLGDVVAMVNEYIKDGAPSEINIGSDTKHDIMELAKVEAFASLDQDARKLIFVKAEREIKMILEDNIMARFLASAQYKRAVD 242
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: D7G3E2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E2_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 9.020e-41
Identity = 87/179 (48.60%), Postives = 111/179 (62.01%), Query Frame = 1 
Query:  784 SSTLGNGNAVVPAVAEPG-RNRGHASDEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEVSAD---------ESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEG 1290
            SST+G           P  R+R    D +RLAGIM YLPLREAFGEFC++SLC ESFQFL D SEF+  ++E   D         E        G G   A+VN+YIKDG+ SE+NI    K DI++ AK + +ASLD D R  IF  AE+EI+++L DNL+ +FL+SAQYK  VD +G
Sbjct:   14 SSTIGGEEDTSDVTQNPSQRSRESYVDSNRLAGIMNYLPLREAFGEFCQKSLCGESFQFLRDASEFRGVIVEGPVDGDANGSAEEEQEAPVHTSGLGDVAAMVNEYIKDGAPSEINIGSDIKHDIMELAKVETFASLDQDARLLIFVKAEREIRRILEDNLMARFLASAQYKRAVDGDG 192
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: D7G0P7_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P7_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.670e-36
Identity = 94/212 (44.34%), Postives = 124/212 (58.49%), Query Frame = 1 
Query:  691 LRPVRSVLRQ-----IPERRRSTVELLLVTPMLRRR--SSTLGNGNAVVPAVAEPGRNRGHAS--DEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEVSADESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEVVDFEGRSQ 1299
            +RP++ VLR      IP+     V++LL     RRR  SST+G G  V+  V +     G  S  D +RLAGIM YLPLREAFGEFC++SLCSE  +                  E   NT     G   A+VN+Y+KDG+ SE+NI   TK +I++  K +A+ASLD D R+ IF  AE+EI+ ML DNL+ KFL+SAQYK  VD +G  +
Sbjct:    5 IRPIQEVLRHAGRNSIPK----GVQMLLALSSRRRRGSSSTIG-GEEVISDVTQNPSQHGRESYVDSNRLAGIMNYLPLREAFGEFCQKSLCSERRR-----------------GEGGTNT-HERVGGVAAMVNEYVKDGAPSEINISSNTKHNIMELTKIEAFASLDQDARKLIFVKAEREIRSMLEDNLMAKFLASAQYKRAVDGDGHGR 193
[Close]
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 5.580e-35
Identity = 117/416 (28.12%), Postives = 200/416 (48.08%), Query Frame = 1 
Query:   55 GYIAMLWSMRRNFFIIIRSPKLACALGLSVTLRCLAKMFEFTVLWSPSSPEGEPIISLMTFPAMLT---VALALIMTAIRLLIMYYPSKAANWRRY-SREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLSAVIMIAGAVALGKELKKVEDFSNMSHDIRLLGA--FLLGILCLRAAVQPIQMHAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQ---IPERRRSTVELLLVTPMLRRRSSTLGNGNAVVPAVAEPGRNRGHASDEHRLAGIMGYLPLREAFGEFCRRSLCSESFQFLLDVSEFKIHVLEVSADESNKNTGFMGFGSYFAIVNDYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIKKMLVDNLLNKFLSSAQYKEV 1275
             +I+  W +R++F+  +RSP L  A GL+  L     +   TV++    P    +  L  F   LT   + +A I+  +R+++MY PS+   W RY  +E  +V  L+   V + +A W      G+ RVA+ + T+  +  V+ ++ ++AL  +L++ +D   +S +I+  GA   L  ++ +     P    A   ++Y ++F  V    I+W+  ++P R  L +    P  R    +L    P  +   +   +    +   A    ++     +  +  I+    L EAF EFCR++LCSES  FL     F   V   +A+E         F  +  I + YIKDGS  E+NI+ KTK  I+K    +A+  L LD       AA +E+ KML +NL +KF  + Q+K++
Sbjct:   26 SHISATWVLRKDFYFAVRSPVLMTASGLAGVLAGSTAVSR-TVMF----PGLRSLFILRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWGRYLKKEAAMVKVLLTAYVIVEVAAWIVVRHVGLARVASFMVTVVKIDTVVTLSASLALFGQLRRTQDVFKVSLEIQRAGACALLTSVMIMFLGSIP----AGVLEFYLVLFYTVRFHVILWLTNIQPARERLGRRDATPNTRGIMAKLFPYVPWRKHGGTVAIDSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYASTANEDTN------FALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARGLDAAAKEVGKMLKENLYDKFRQTDQFKQI 426
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LTR6_ECTSI2.230e-11747.94Developmental regulator FlbA n=1 Tax=Ectocarpus si... [more]
A0A6H5KX00_9PHAE1.270e-11346.40RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JIZ3_9PHAE1.440e-10543.24RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0P5_ECTSI1.960e-6545.45RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0P6_ECTSI6.840e-6035.23RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5J8W8_9PHAE8.120e-5235.57RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JD29_9PHAE2.080e-4347.66RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3E2_ECTSI9.020e-4148.60RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0P7_ECTSI1.670e-3644.34RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLA9_ECTSI5.580e-3528.13RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig10contigP-fluviatile_contig10:955960..969761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.4
Seed ortholog evalue2.4e-96
Seed eggNOG ortholog2880.D8LTR6
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2D0MX@1,2SERP@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size1632
Cds size1290
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig10.679.1prot_P-fluviatile_contig10.679.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig10 955975..969434 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815373.1883142-UTR-P-fluviatile_contig10:955959..9559741622815373.1883142-UTR-P-fluviatile_contig10:955959..955974Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 955960..955974 +
1693561630.544878-UTR-P-fluviatile_contig10:955959..9559741693561630.544878-UTR-P-fluviatile_contig10:955959..955974Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 955960..955974 +
1622815373.274861-UTR-P-fluviatile_contig10:969434..9697611622815373.274861-UTR-P-fluviatile_contig10:969434..969761Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 969435..969761 +
1693561630.9852276-UTR-P-fluviatile_contig10:969434..9697611693561630.9852276-UTR-P-fluviatile_contig10:969434..969761Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 969435..969761 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815373.197617-CDS-P-fluviatile_contig10:955974..9560661622815373.197617-CDS-P-fluviatile_contig10:955974..956066Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 955975..956066 +
1693561630.8943837-CDS-P-fluviatile_contig10:955974..9560661693561630.8943837-CDS-P-fluviatile_contig10:955974..956066Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 955975..956066 +
1622815373.2096996-CDS-P-fluviatile_contig10:962923..9632441622815373.2096996-CDS-P-fluviatile_contig10:962923..963244Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 962924..963244 +
1693561630.9057076-CDS-P-fluviatile_contig10:962923..9632441693561630.9057076-CDS-P-fluviatile_contig10:962923..963244Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 962924..963244 +
1622815373.2186053-CDS-P-fluviatile_contig10:964930..9650851622815373.2186053-CDS-P-fluviatile_contig10:964930..965085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 964931..965085 +
1693561630.9137893-CDS-P-fluviatile_contig10:964930..9650851693561630.9137893-CDS-P-fluviatile_contig10:964930..965085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 964931..965085 +
1622815373.2291648-CDS-P-fluviatile_contig10:966156..9662591622815373.2291648-CDS-P-fluviatile_contig10:966156..966259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 966157..966259 +
1693561630.9336827-CDS-P-fluviatile_contig10:966156..9662591693561630.9336827-CDS-P-fluviatile_contig10:966156..966259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 966157..966259 +
1622815373.2376873-CDS-P-fluviatile_contig10:966957..9672161622815373.2376873-CDS-P-fluviatile_contig10:966957..967216Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 966958..967216 +
1693561630.9476452-CDS-P-fluviatile_contig10:966957..9672161693561630.9476452-CDS-P-fluviatile_contig10:966957..967216Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 966958..967216 +
1622815373.2466173-CDS-P-fluviatile_contig10:967548..9677731622815373.2466173-CDS-P-fluviatile_contig10:967548..967773Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 967549..967773 +
1693561630.9567277-CDS-P-fluviatile_contig10:967548..9677731693561630.9567277-CDS-P-fluviatile_contig10:967548..967773Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 967549..967773 +
1622815373.2573876-CDS-P-fluviatile_contig10:968698..9687551622815373.2573876-CDS-P-fluviatile_contig10:968698..968755Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 968699..968755 +
1693561630.9660559-CDS-P-fluviatile_contig10:968698..9687551693561630.9660559-CDS-P-fluviatile_contig10:968698..968755Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 968699..968755 +
1622815373.266298-CDS-P-fluviatile_contig10:969356..9694341622815373.266298-CDS-P-fluviatile_contig10:969356..969434Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 969357..969434 +
1693561630.975233-CDS-P-fluviatile_contig10:969356..9694341693561630.975233-CDS-P-fluviatile_contig10:969356..969434Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 969357..969434 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig10.679.1

>prot_P-fluviatile_contig10.679.1 ID=prot_P-fluviatile_contig10.679.1|Name=mRNA_P-fluviatile_contig10.679.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=430bp
MLTLAIIFACSCFGYIAMLWSMRRNFFIIIRSPKLACALGLSVTLRCLAK
MFEFTVLWSPSSPEGEPIISLMTFPAMLTVALALIMTAIRLLIMYYPSKA
ANWRRYSREGTLVVSLVVMDVFIGIALWSAAAVQGVERVAAVLETLSPLS
AVIMIAGAVALGKELKKVEDFSNMSHDIRLLGAFLLGILCLRAAVQPIQM
HAWATKYYNIVFLWVSHPPIVWICVLRPVRSVLRQIPERRRSTVELLLVT
PMLRRRSSTLGNGNAVVPAVAEPGRNRGHASDEHRLAGIMGYLPLREAFG
EFCRRSLCSESFQFLLDVSEFKIHVLEVSADESNKNTGFMGFGSYFAIVN
DYIKDGSHSEVNIDFKTKRDILKYAKFKAYASLDLDGRQEIFTAAEQEIK
KMLVDNLLNKFLSSAQYKEVVDFEGRSQE*
back to top

mRNA from alignment at P-fluviatile_contig10:955960..969761+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig10.679.1 ID=mRNA_P-fluviatile_contig10.679.1|Name=mRNA_P-fluviatile_contig10.679.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13802bp|location=Sequence derived from alignment at P-fluviatile_contig10:955960..969761+ (Porterinema fluviatile SAG_2381)
GCGTTCGATTGGGTGATGCTTACTCTCGCGATAATCTTCGCATGCAGCTG
CTTCGGATACATTGCGATGCTCTGGTCGATGAGGAGAAACTTCTTCATCA
TCATCCGGTGAGCACGACCACAACAGGCTCAACCAGCACGATGAGAAGAG
CAGTGCCGATTGTCCTGCTTTTCAAGTCATGTTCGCTGATCTTTCGACAA
TCGACGAGCTGATCTTTGTAATATTATCCACAGCCATCCAGAGTTGCTTG
CACGAATACCAAAAAAGTCATGATGTCCACAGCCAGTCACAGTTGCTTGA
ACAAACCTTGAAGCACAATTCTAAATAGCTAGGGCCGGTGGAAGCGAAAA
ATTTCAGGGTCGGCTGTCCACGGAAAATGTAAAATCACTGTGATTTACAG
TCACCGTGCAGCGAATTACCGTAGTCTTGTAGCGGTTTAGGGGCGATACC
TGGATAGGGGACCACATTTACTTACGGTCAGATCATAGTTTAGTGGAGCG
ACCGATAGATTCGGGAAACCGACTGCCCGTTTAGGAACAAGACTACTTCA
CAAGAGGCAAGATCACTCGGTTACGGTGTCGGAGTGGTTTGTGCAGCGCT
AGCAGGCACGTGTGCATCGCTTTGCTTGTTGCAGACTCGGTATAGAGTCC
ACCGCCGCACAGCGGAGGTGGTACTCAAAAGAAGTGCTGCCGCCACTGGC
GGTACCTCTTGGAGCAAGGCAAGGATGGAAACCGATTATTTACCAACTAG
TTTTCCAGATTCAGGTTTACCTTGGCGATCAAAGAAAGTGAGAGGGGAAT
GGGGTGACATGGGAAACGGGGTGTGGTAAATTGGGTGACATGGGAGCAGT
ATTTGTACGACGGGTTGATACACGGAGCCCCCCGACAGCCTTCTTCGTGT
GCGGTGTTGGGGGGGGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGT
TAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGT
TCTCACCGGACCAGGCTCTCACACCACCAAGCGCGAAGCGCCTTGAGGTA
TTCGGCGAGTCGCACGAAGGGTGCGCTGCATCCTGCTAAGGGTGTTCGGC
ATCTTGTGCTTACTTCCTTGCATTCGGATGACAGCTGCGTATGGCTTAAT
TTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAGCACTATGTAAC
TGCCTCGAGGGTCCTTGACCATTTTAACACAACGTGGTGCGATCATCCCC
CTTGCACGGAGTGAGGGTTCTCCACTCCGCACAACATGATCTTCTCGACC
ACCATTATGGTTACCGCCAAAAACCAGAAAAAAAAAAGACGGTAACCTGG
TTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACAACGTCGTTGCCACG
CGACGAAAACCCAATCCCGATGGCAAACACCGAGATGAGAGCCAGCGGGA
GGGCGTGTGCGGTGTTGGGGGGGGGGTACTTGCCCCGGACGTGGGAGCAA
ACAAGTCAAACTATCTCTGCAGAGGTGTTTAGAAGCGTAGATCTCACTCC
TGGTATCCCGTTATCCTATTACCCTGAGTGACTGGGTGGTCTATCCTCCA
CCTAGGCGCCCTCGCAGTGAGGGCAACGCGTGTTGACTTTTCTCAGCCAC
GTACCGATACCCAAGCATGATATCGTGCTGGCTTACGAGCCATTGGAGTC
AAGGTTTTGAGGTCTAGAGGTCACATCTTGTCGTGGCTTTACGGTGGCGA
GTGTTTGTCGGGCGGGTGCCTAAATCGCGGCTTTCGCGTGTGTAAATCCT
GCGGTGGTTGGGTTTCTGATATGTGTGAAGAGAACGGCGGTACAAGTCCG
TTAATCTGTGGATAGGTGTGCGTATTTTACATTTGGGAGACGGAGAAGAC
AAAAGAAGGGTGGAGAAAGAAGACCAGCCAATCAACCGCGTACATTCACC
AAGATGCACGGTGCAATATCCGTTTGCGGAATCAGGGGACGCACTTGCGT
GGGGCATGAGGGGTTGTCACCAGCATCCCCAGCGGCAATACCGGAGCCAA
GGCAAAAGGCAATCTCAAGGAACTTTCTGCTTTGAGGAAAAATTTGTCGT
CTACGGTGAGTGGGGGCATAATGCCCGAGAGTATTGTGCCGTGGCTGCAC
GTCCTCATTACCGAGCGCGGGCAGATTTCACTTGGTGCCAAGGCGATGAA
GTATTTCGTCTTTTTGGCAGCGGAGGTACCGACAACGGTAATTCTTCGTT
CAGCAGCAGCGCTTTCGCCACTGCATCACCAGCTGGATCATCTGTGTCGG
CGTGTAGACCACCACCGGCCGTCATGTTCGAAAGTGACAGGCATCCTCAT
TTTCTTCCTGCTAGAAGTACCATCCTGGCGTGCATTGCCGGTGGCAGTGT
CCCCTTCACAGCTGTGTCGGTGAAAGGAGCAATCGCGGCACCTGCGATGG
TGGGCGGGAATGATGGCCGTGTTGAGGTGGCGCAATTAGCCGCGCTGATT
GCGTTAATGGCAATATTCGAGGTGCGCTTGATAGAGTTGGAGGGGTGGTA
TGGAAGACGCCGGGAGTCCAATGTCGCAGACAACGCCACAGATGCGGATC
ATGCCGCAAAAGTAAAGGAGGTAGCTTCCTCTGCGATCTGCGGTACTGCA
CCCCGTGCTGTACCCGTTGAGGGAGAAGCTAAGGCATCCTCGTCTACCGA
AATTGCCGAAGAGTTCGCATCGTGTGCTCGGCAGATGACGGTACCGGAGG
CTGCGTCTGCAACTGGAGACGCTTTTCCCACTGGCGTACGAGAAGGGAGG
GCTAAAGGGGCGCTAGTATCTTCGAGTGCAGCATAGACTTAGCGGGAGGA
TCGACGCGACAGTCCGGCGAATGTGCTCCCCTTGCTGACGGTACTCGGGT
GGCGAAGATGGATGGTGCTTCCGTCACCGCGTCAACGTGCGACCGAACGC
GACAAATGGCGGGAACAAATCGACAGTGGATCTGTACGTGATGCGTCGGC
GGGCCAGCCGAAATCTGCATCAGACAACAATTACAAGGTAGCGGCGGCGG
CGGCGGAGGCAGCGGATATGGGGGGAAGCAGCGCGACTGCCTGGAGATGG
GCTTGCTGGTTAACGGTAGAGTCAGCTACATCGAAAGCGTGTGCGGCGAG
GGGGGAGCTTCCTCCCGCCCCTTCAATCCGGGGCGTGTGCTTCACCTGGA
GGTGTGTGAGGATGAAGACAACAGCAGCTGGTTCGAGGACGACAGCAACA
ATGGCAGCAGCAGCGGCATTGTCAGCGAGAAAGAAACGTTCAATGCCGCT
TTGACCGCGGCAAGCGGTGCACTCGGAGCACGAGAAGCAGGGGGGCGGCG
CGTGGTAAGCCCTAAATTCGATGGCGGATGATTTGGCGGCTTTTGGGACA
TGGAAGGAGAATTCTTCGTGCTCGTAGGGAGGATCAGTGTGTTTGAGAAC
GAGAAAATGGAATGCGGACGCCATCAGCTAGGGATTCTCACACCTGACCC
AGGCACGTTCGCTACTCTTGCTTGGTTTCGCTTTGGTTTCTACCCGAAAG
TTTGTCTGGTGTGTGTTGTTGTCGAAGAAACTGAAGCTTCAGGTGCATGT
TTTTCGCGTGAGAGGAGAATCGCACTTTCTGAGAACCCCAAGTGGGATAT
CGGCATTTTGCTGTTCTCGTCGGCTTCCGCAAAGAATGTGCTCCGCGCGC
TTTGGGACGACAACTAAGTCTCCTTTCATTTTTGGTGTGTTTGGAGAATC
TTGATCTCTTGAGGTGGTTCACCTGTACGTTTTAGCTGGTGTATATCCTT
TCACCAACCCGATGCACGAGGGAGAGATCTTCGTGCACAGCAACTTCGTA
AGCTTGCACAAAGCTATCGTCACTTGTTGCTCCCAACAGTTGTTCAGCTA
TTGGCTGTTTCCCAACCTTTTACTTTGTTTTTTGGTGGAGCTGGTGGGGC
GATGTACTTCTTAAATCTCGCATTTTTCTTCGGATGTTGTTTTTCTTTTG
GCTTGCTTTTCGTGTTTGCTTTTGATCTGTTCTGCACTGCTTACAAAAAT
AATGAGGGGGGTGATTCGATTTGTCATGATTGTCGCCACAGTGCAGGCAA
AAACGTTTCTTGTTTCGGATTGATGTGTGGCATTCTGAGCGGCACTGCTT
GCGAGAATCAGAAAAGGAAGTGGCGTTTCTTACTCCTTGCCACAGTGCAA
GCAATACTTGTTTTGGCTTTGGGGGATTTTGTGTTCTTGAACTGAGAATT
CGAGCATCATTTGGAAGGTCGAAGTCTGATCTTTCACTTATCCTCGTCTC
CATGGTGTGCGCTGACAGATTATGATTCTGTTTCTTGCGCTTCTTCTGGA
GCTTGGATTTGTACTCCGAGCTGCCTTTTCGCGTCTTATCTGAGAAAGAC
AGTTACGTCTGGTATCACCGTGCAACATCTCGTCTCGGCGGTATGTGCTA
ACAGACTTATTCGCCTTCTTAAGCGTATCTGCAGTGCTGTATTTTTCCCA
CCGAATGGGAGGTAGCAAACACATGTGCCTTGGTCTGAACCTGCAGCTCA
CCTCTGTGGTTGCTTCAAACCGCTTCACTTCCATGTTACTGTGTTCTTCC
CCGTGGCAGGACCCGAAGGACATGATTCGCAACATCTTGTGGCTGAAATG
TTGTCTCTTCAGGTGTACAGGATTTATGAGTAGATGTTCAGGGGGACTGT
CAACACGTTCCCAATTGTATTTTGAAGGGTGGGGGCAAGAAAACACGAGC
GAAGGTTTCCTCCGACATTTCATGCACAAGGTGTTTGACTTTCGCTGATT
TGGTCGGCTTTGTTTGCTCTTTCTCAACGTTGCATCGTAAGGAGCGCTTG
ACTTATTTTAATTTGCTCTCTGTTGAAGCTTTGGTGCTTCCGAGGCTATT
TCAAATACTCGGAGTATAATTTTGTGTGAGGATTCTGCCTTGATGGCTTG
TTGCATTTCTCGGAGCATCTAGCGGCTTGTTCCGACGGAATGAAATTTTG
GTTGATATGTGCCAAGAAGAATAGTTGTGTTCTGATGGATTGAGAACTTA
TCGGGAAGCGAATTGGTGGAATTCGTTGGTAAACCAGTAAGGAAATTATT
TTTCGGAAATGAAGTTGATGACGAGTGTGTGACGATTTTCCGAGAGTTCA
AATGTTTAGTGGATGACTTGGCGTATGGATATTTTATGTTGATAATATCT
TGAGTGGATAGCTTCGAATGATTGGCCTTTTGATAATGACTTTTCCCGTT
TTTCCCGGATATTACCCGAAAGTTTTCGAAGATCAGCATCCCGCGTCGAG
TAGGGGGGCTATTTGGGGTACACGGTGGAGATACTGACTCACGCAATCTC
TGGGGGGGTTGACGCGGAAGTCGCTGGTAGGAATACACGGAGCCCCTGAC
GGGCTGGTTCGTGTGTGTGGTGGGGGGACACTCGCCCCGGACTTGGAAAA
GAAAAATCAAGCTATCTATGCAGAGGCTCCCCAGCCGAGAGGGTGAAGGG
TGTTATTTTTTTGTCACGCACCGACACCTAAACACATAAAAGCGAAACCA
CAACGGTGTACGCAACCTTGAAAGGTCAGCCGCGAGGGGGTGCCCGTAGG
CAAAAGGAACCATCAGGGGAGATCCTACGAGCGAATTCTCAATCTCATCA
TCGTTCTTGCAGCTACACCGCTGAGTGTTGTGCACGCCGCTGACAACGCA
GACATAAAGGGAAGCGCATTAAGCTTCAGTATTCGCTCTAACTGCCTACT
GTCTGCAACTTATGTTGTTGTACCGCTGTTCCCTGAGAACAAGCACAACA
CTGGACGCGTTGACATGCTACCGTGCGAGGTTCCCCAGCCTACTTCATGT
GGTGCAGCGCGAATTGGCATCTCGTTTGCATTAAGGCACACGCCGTGAAG
AACCCAGCCGCCAACGCGCACTGCTGTCACTACCTTCGTACCAAACGGAG
TTCAATGCCGATTGACACAGGTTCGGCAGCTTTATGTCAAATCGCTGAGG
GAGATATGTGTGTCACACACGCCATGGGTGCATCGATACGCAGCGCCTTT
TCTAGAGTGTATCACGCTTTAAATATACACCGTATCACCCGGACATACAC
CCGACCGTGCCGTACATGATAAGGTGGTGCACCCGTTCACCAATTTGTTG
TACCATTCGTGAACACCCGAGGAGTTGCAGCGCCGAAAAATTGCATCGCG
CATATGATACGGCGTGTCATTCTGGTGATATGGTATGTCTCGCGTGTACC
GCATCAACTGCAATCTGCATTGCGCGGTATTGCGCAATGATAGTGTGCCC
GTCACGGTGTGGTCGTGCCCGTTTTGTAGAGGAGGCTTCACCCTTTCCTC
GCAGAAGGTTTCATAATCCGTCGGTCGCTCCGCCAATTTGGTGGTCTGCT
TTGGTGGTCTGACCCGTAATTGTTTCTGATCCCCTAACCAGGAATGGCCT
TGAACTGCTACAGCCCTCAGTCTACATAAATTATCGAATCTTGGCACACT
TTAGATTCGAGAGTGCTGCACTCTCTGGTTCAAAACCGAAGCCAAGCACC
GGAGGAAGAGGGGCGGGTGGGGGCCTCAGGAAGAGAGACTCTTCTGGGGA
CCACGGGTTAGACCTGGTGCGAGGCACCCCTGCAAGCGGAGGATAAAAAA
TAACATGACCCGCACTGACTACAAATAATCACGAGAGAAGGGCTAACACC
TGTCTGTCACGCATGAACGCTGTCCCCACAAACGATGAGGCGGCGCTCCT
TGTCCCCGGTGATGTGCCCACACGTTCTCACTCTCCTTTTTTTGCAACCG
AGTCCCGTTTCGGGCCCTTTTCTTACCATTTTTCCAATGCCGCTCCCTGA
CGAGCTTTGGAATACATACCTTTCGTAAAGCCGGTCACTCCTCAACACTT
GGCCTTTGACGCACGCCTCGCTCCGTTTCACCCTCGGCGCGCGTGCCTCT
CTCTCTTTCGGAAGGTCTCCGAAGCTTGCGTGCGCGTTAGGCCTCTCCGT
CACCCTGCGATGCCTCGCAAAGATGTTCGAGTTCACCGTCCTCTGGTCGC
CCAGTTCTCCGGAGGGTGAACCGATCATCAGCCTGATGACTTTTCCGGCA
ATGCTTACCGTCGCACTCGCCCTCATCATGACGGCGATCAGGCTCCTGAT
CATGTACTACCCGTCGAAGGCGGCCAATTGGCGGCGCTACTCCAGAGAAG
GAACCCTCGTCGTCAGCCTGGTGGTCATGGACGTTTTCATCGGGATAGCG
CTGTGGTCGGCGGCCGCGGTGCAAGGCGTCGAGAGGTTCGTTCCTTCTTT
CGTCAGAATGATGACTTTAGGTTCGTCTTTCGACAGAATGATGACTCTAG
GTTCGTCTTGCCATAAACCAAAACAACCGAAGACGACTAGAAAGAGGCAA
CCGGGTCATTAAAAGCAGACACCACTCGATGTGTGTGCACTACTTGTGCT
TACCCTATTTATTGGCACTCGACCATTTTTTTTTTCTCGCAGCAGCCTAC
CCTCCTTGTTAGTCTTCAATTTTTTTGGTGCATACCCCAGGCAGGCAGGC
AGGGTTCAAGCCGGCGGCGAGGTTTCACTGGCGAATGAGCACAAAGTAAA
AACTAGTGTTTTTGCCCAAAAAAATGTTCCCGAAGTATGTTTTCGTCCCA
TTTATTCTGGCGAGTATTGTCCCTTTCTGGCACAACTTTACCTCTAAAAT
TTTCGGTGCACGTAGTGTACTGCATTCTTGTTCAGTGTATTTTATCTTGC
AACTAGTCAGCCAGGATCACACAAGAGGGGGTAAACACAGTGGTTTTTTT
TTTCCATTTTCTTTTTCTACTTTGCCCCACCTTCCTCCTGCAGTACGCAG
TTCATTCTTTGTCGCGAGCAGGGCACAACCGTCCCATTTCCTCGCCAACA
GGTCATGACGTCCAACTTATATACTCGAGAGCTTTTCAACTTTGTATCGC
TTTCTACCTTTCACCCTTATCGGGATTTGAACTCACGCTTTTGGTGCATG
AGGGTTTTTCGAGGTTACCCACTAGAACGCCACCGATGCGATCGATCAAT
GTGAGTGTCCATTGGACGACGTGGTTTGCGAGTACCTTTTCGTTTGAGGA
GAGGAAGACACTTGTTGCCAGGCAACACGTGAATCACCAGTACCTAAGCT
TGTTCTTGCGGTGGAGAATGCCATGCTTCATAGGGCCGAGCGGGCCTCCT
TCAACGCCGCCGGCAGCAACGCCGCCGGTGTCAGTCGCCATGTCTCTTGC
TCCTTGCGTGTAAACCCTTCTTTTTCATGGATAACCGTTCTCTTTCATGG
ATACCCCCTTCTTTTTCATGGATAACCTTTCTTTTTCATGTATTCGCCTC
GCAGGATGCAGCGGTCGCCGTATTTATGTATTGAAGCAAAAAAATACGGA
GACCGGCCAGCGTAGTTTATCATCCCTGTGGGTTTATTCTATGGAGGGGC
GAACGCAAGGAAGCCATGAGCTAAATACTACCCAGCACACGAAGAAACAA
GAACGAATTGTTATCGACCTCTTTTCTCCCTGCCTATCTCTCTCTCTCTG
GCCTCTCTCCCGGCCTGTCTCTCTTGCTTTCTCCGTCTCTGTGTCTCCGT
CTCCCTCGCTCTTTCCTCCCACTTCCTTTCTCTATGTGTCTCCCTGTCAC
TCTGCCTGTTTCTCACTCTCAGCCCTCAGCCCCCCCCCCTCGTTCGTCCC
CTCTCTCTCTGCCTCAGTCTCTCTCTCATGCACACGCCAGAATCTCCCTG
AACCTGTGCCACACAATGTCTTCGTTGTCGTGGGGCACCATCAGGAGGGA
ACCGTGAGCTGGAAAACGTTCTTGTTTTTTAACCCCAGCTACGACTGACG
TATATTCATTGGTCAGCCGGTTGACGCGGTTCATGAAGCACACCCACACA
ACACACACACTCACCGGTTTTGCACTCGTCGTACTCTCACTCTCATGCGC
GTGGCGGATCTTCGTACTCAGGGTTGCGGCCGTGCTGGAGACACTTAGCC
CGTTGTCCGCTGTGATAATGATCGCCGGGGCCGTAGCCCTGGGCAAGGAG
CTGAAGAAAGTCGAAGATTTCAGCAACATGAGCCACGACATCCGTCTCCT
CGGGGCGTTTCTACTCGGAATACTCTGTGAGAAGAAGGTCTTGATGTATG
GGTAGCGGGCGGCCGTTTCTTTGCTGCTGTCGTTTTGTCGCGAGTGCGAT
GACATCACTTTCACTGGCCGTGTCTGCTGAGAAAGTACGTTCGTGCTTGT
CTGATTAACTGATCAAATTTCACCTTGACGAAAGCCCACGCCTGCCATGT
GAGGGCGGGTGGTTACGGTTCACGGGAAAGCTTGACGTTGTGCTGTTCTT
GGGGAGATCTCCGTCGGGAAAGAGACACCCACCCGCGAAACCGGCCGGCC
ACAACTTGTCTCCTTCGATACCGAGCGATCGCAAAACTGCGTTTGGGGAA
AGGGCTGGATATATTGCGCACTTAGCAACTCTGTGTACGATTTCATAGGG
CGTTCATCTTGCGAATCAATTGTCGGTCGCACTAGACACCACACACCCTG
GGTCGATTTCCAGAGTTCGATATATATCTCGGCCGACCGCGAAGGGCTGA
CCAATACCGAACGACGCGTCACTACAACGCTCTGTGTATCATCTTTCGAA
AGCCTTTCCGTTGGACGCACTCACCTCTCTCTGTTGCCGTAGAGGAAACG
AGCGTTGAGTATGAATCCAGGGCGGTAGAAACTCTCGTGCTATCTTCGGT
GGTAGCTGTCGTTCGGCGAAACAGGTCGAAGTTTGCCGGTGGGCTTGCTT
CGTGTTTTCGTTTAATTTTCGTCTTCCATTTATGAAGCGCCCTCCTTCCC
TGTGTACACGGCGACCCCGGTATGCGCGTTCTCGGGACTTCGCCACAGCC
CGGCAGGACACCCTGGACTGCGCTATGTTTGAAGGAAAGGGGTGGCGAAG
GATACGATGCCCGTGAAATGCCCGTCCATGTATTGTGGAGTGACCGGTGC
TTGAAGTGGCTACGGTTTGGGCGCGCGGGGAAAACAATCGGGATTGACTT
TGTCAAACCAAGGGGTTGAGACCCGCACGACCCTGGCAAGGAAGGGAAAT
GGGCGTCCCTCTAGAATGCGTTCTTCATTGAGCGTCAATTCTTCGAGCCC
CGCTCACGTCGACCCCTTTCGTTTGCCGCCCTCTCTCCCTCCGACAGGCC
TTCGCGCAGCGGTGCAACCCATCCAGATGCACGCATGGGCCACAAAGTAC
TACAACATCGTGTTCCTGTGGGTTTCGCACCCACCCATCGTCTGGATCTG
GTGAGATACCCCCTCCCCCTCTCCTGCGTCTACCTCTTTGCCAATCTGTC
GAAACGCTAACTTTTTGTCGGAGGCAAGCACCTTTACGACTCGGGGGAAT
AGAATTGTTTACTATTGTACGTAGCCGAAGGGCAGGTGAAGTGAATGATA
GATGCCAAGCAGAAGCAGCTCCTGCTTCGCTTAGACGTCATGTGATCCTA
TACCTACGTAGTCGACTCCTACGCGGAAGGGTTCCCCGCTTCCGACAGCA
GGAAGGTTGTCGTGGGCTGGATATTGAAGATTGTAATCTGAAGAACGTAA
TCGGCTGCTACGGCAGGAACTGGGTGGGTTTTCATTCCAGGGATTCGGCG
TGATTCTGGGTGGCCACAGAAAAAAACCTTAGCCGGTGTCTGCTTTAGCG
GCGATCGCCACCCTTTTCCATCCTCACACGGCGACACTGGAAACAAGCAC
GTGCTTCGGATTGACCAAACATTATTGCGTCTCGTCGTCACCTCTTCACT
CTCCCTCTCTCTGTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCTCCTCTCCC
CTCCCCTCCCCTATCTTTAAACTTTGTCGCGTTGTTTGGCGCAAGCAGCG
TCCTCCGGCCGGTGCGCTCGGTACTGCGCCAAATCCCCGAGCGGCGGCGC
AGCACCGTCGAGCTGCTACTGGTGACGCCGATGTTGCGCAGGAGGTCGAG
CACACTCGGCAACGGCAACGCGGTCGTCCCGGCGGTCGCCGAGCCCGGCC
GCAACCGCGGCCACGCGTCGGACGAACACCGGCTAGCGGGCATCATGGGC
TACCTCCCCCTTCGGGAGGCGTTCGGAGAATTCTGTCGCAGATCGCTCTG
CAGCGAGGTGAAAGTCCCGCCACCATGCACGCGCCGCCCGTGCATGCGAG
TGCGTGCATGTATGCGTGGGTGTGCATGGGAGTGCGTCCCCTACGGTCTT
CTCCTCACTCCATCCCTCCGTCCCTCCTCCGTCCATTCCTCTATTTCTCC
CTCCCTCCCTTCTCCCCACCTCCCTTCCTCCCTTCCCTCCGTCCCTCCCT
CGTCCCTCCGTCCATCCCTCTCTGTAACACTTCCATACGCTGTGCTCTCC
AGTTACATGCTTTAAGTGCTTCCTCTGCGAACCTAATCCCTATTCCTTTG
TTTGGCGTTGGCCCTCTATCCTTGCGTCTTGATTTTCAGTCATTCCAATT
TCTGCTGGACGTGTCCGAGTTTAAAATTCATGTCCTCGAAGTTTCTGCCG
ATGAGAGCAACAAGAATACAGGCTTCATGGGGTTCGGCAGCTACTTCGCC
ATTGTCAACGACTACATCAAAGACGGTTCACACTCGGAAGTCAACATCGA
CTTCAAAACCAAACGCGACATCCTGAAGTATGCCAAGTTCAAAGCCTACG
CTTCTCTTGACCTGGTGAGGGGTGACATTTACACAGGCAGGCAGGCAGAC
AGGCAGACAGGCAAGCACGGAATGAAGATTGAGGGGGGGGGAGGGCGACA
CATAGAGTCGGGAAGAGAGCGAGAGAGGAAGAATGACAGATAGAAAGCCT
ACACAGAGAGACCAGGTAAACGAAGCGAGCGAGAAATACCTAGAGAGCGA
GAGAATGGACAGCTTGAGAATCACGCGGAACGAAACAAGGGCAGATGAGG
GGAAAGGGAACACTTCCACTCGGTTTTGTGCCACTTCCTGTCCGCGCACG
ACGAGCGCAAAGGGTGCGCGTTGGTCAAGGTAAGGCATGAATGGTGAGCC
CAGTTCTCAGGATCACTTTTAGGAGGCGACACACTCGGCCTCGGAATATC
CAACGCCATGTTCAGGTGGAAGGTGGGGGAGGCGGCTGAAAGCGAACGAA
GTAGGCCCCCTGTGCTGTTCTTCCTTCTTTGTGCCCCTGGTTGCTCCGTC
AAAAAACATCAAAACAATCGTCGAAGCACGATGTCTAGATTGGTGCCAAA
ATGAATGGGACGGACAAACAAACACATGGTCGCACCCTCATGCTTCCGGC
GCGTCTTGCGCCTTCCTCGTGCGTTTTTCGCCCCGGGTGTACACGTGTTT
CTAGATACCTTACCTTCTCTTGGCGACGACGATGCAACCACCTTTGCCCT
CCACTGGGCGTAAGCCGCATCAGTGAGTCGTACTCCAATTTTTTGTTTCC
AATTCTCCGACCATCGGTCCTCATTTTTCTACTGGTCGGTCGAAAAGACG
CGTCTGACAGAGGAACAAGCGTGAGCAACTTGCAATACCCCGCTGGGCTA
CTGCTTATCAAACGCCGTTTGTGAAGATACCACTGGTGCTCGCTTTCCTA
TCTTGAAATATTGTTTGTGGTCATTCTTTCCGTTGGCAGGATGGTCGCCA
GGAGATTTTCACGGCAGCCGAGCAAGAGATTAAAAAGATGCTCGTGGTGA
GTTGCGGGAGGCGATTGACACTCGAGAGGCAGCGCCGTTTTGTTTTTTCT
GATCATGATCCTTGTTGCTTCAACTGCGGTTGACTGGATTCCGGCATGGC
GAGTGTTTTGGGGATGAAAGGGACCACCGACCGCCGCGCACGGCGCGCGA
CGTTGGTGTACCTCTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGACAATGTATTTTTCTCGAGCGGAGTGAACGCCCTTGCCTGCCATA
TAAGTGCACGTGATCTTCGACAATAGAGCCGATTAAAGCACGTGCGTCGT
TCGCAGAGTTTCATCCATTGTGCCCATGAGGTGCTCCCCCTTCGATTGAC
AATGGCTGACTTACAGAAAAGTATGGGAAATTCCTACCCTACATGTGCGC
ATAACGGGTTTGCTACAGCGTCCATTTCTTTTTTTTTTTTTTTTTTTTTT
TGCAGCCTGAACGGTATCATGGTATCTGGGATCGACTCGCGTGCCGCACC
CCGTAACGAAATTTTTTACCGCCAGCGATGGCGGTATCATTTTCTTACAT
ACACGGTATCCCCCCCTTTTTCTCGGCCGCCGCATGCCCCGTTCCAGGAC
AACCTCTTGAACAAGTTCCTATCATCTGCCCAGTACAAGGAGGTCGTCGA
CTTCGAGGGCCGCAGCCAGGAATGACACAAACAAAATCGGCCTGCTTGCT
TGCTTGCTTGCTTGCTCGTGTCTTACCATTTTCCAGACGCTACTTGCGCT
ATTGGGATCGCGGGATTGGCGAAGATACCGTATTCGACGGTGTATACCAG
ACCCGCTTGAGTCGACGTTCAAACCTCGATTGCCGCTAATGAGCAGGCAC
ATATGAACCCTTGATGAGATACGTCCAAAGCCGCAGTTGTTGGGCCCCAG
CACTCATCTTTCTGAGGAACTTTGGCTCTATGAAAAAATGTCGCCTCTAC
GGGGTGTGGTATACACCGTCCTGTTAGATGAATGCGTCCACCCCGATCGT
CC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig10:955960..969761+

>mRNA_P-fluviatile_contig10.679.1 ID=mRNA_P-fluviatile_contig10.679.1|Name=mRNA_P-fluviatile_contig10.679.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2580bp|location=Sequence derived from alignment at P-fluviatile_contig10:955960..969761+ (Porterinema fluviatile SAG_2381)
ATGCTTACTCTCGCGATAATCTTCGCATGCAGCTGCTTCGGATACATTGC
GATGCTCTGGTCGATGAGGAGAAACTTCTTCATCATCATCCGATGCTTAC
TCTCGCGATAATCTTCGCATGCAGCTGCTTCGGATACATTGCGATGCTCT
GGTCGATGAGGAGAAACTTCTTCATCATCATCCGGTCTCCGAAGCTTGCG
TGCGCGTTAGGCCTCTCCGTCACCCTGCGATGCCTCGCAAAGATGTTCGA
GTTCACCGTCCTCTGGTCGCCCAGTTCTCCGGAGGGTGAACCGATCATCA
GCCTGATGACTTTTCCGGCAATGCTTACCGTCGCACTCGCCCTCATCATG
ACGGCGATCAGGCTCCTGATCATGTACTACCCGTCGAAGGCGGCCAATTG
GCGGCGCTACTCCAGAGAAGGAACCCTCGTCGTCAGCCTGGTGGTCATGG
ACGTTTTCATCGGGATAGCGCTGTGGTCGGCGGCCGCGGTGCAAGGCGTC
GAGAGGTCTCCGAAGCTTGCGTGCGCGTTAGGCCTCTCCGTCACCCTGCG
ATGCCTCGCAAAGATGTTCGAGTTCACCGTCCTCTGGTCGCCCAGTTCTC
CGGAGGGTGAACCGATCATCAGCCTGATGACTTTTCCGGCAATGCTTACC
GTCGCACTCGCCCTCATCATGACGGCGATCAGGCTCCTGATCATGTACTA
CCCGTCGAAGGCGGCCAATTGGCGGCGCTACTCCAGAGAAGGAACCCTCG
TCGTCAGCCTGGTGGTCATGGACGTTTTCATCGGGATAGCGCTGTGGTCG
GCGGCCGCGGTGCAAGGCGTCGAGAGGGTTGCGGCCGTGCTGGAGACACT
TAGCCCGTTGTCCGCTGTGATAATGATCGCCGGGGCCGTAGCCCTGGGCA
AGGAGCTGAAGAAAGTCGAAGATTTCAGCAACATGAGCCACGACATCCGT
CTCCTCGGGGCGTTTCTACTCGGAATACTCTGGTTGCGGCCGTGCTGGAG
ACACTTAGCCCGTTGTCCGCTGTGATAATGATCGCCGGGGCCGTAGCCCT
GGGCAAGGAGCTGAAGAAAGTCGAAGATTTCAGCAACATGAGCCACGACA
TCCGTCTCCTCGGGGCGTTTCTACTCGGAATACTCTGCCTTCGCGCAGCG
GTGCAACCCATCCAGATGCACGCATGGGCCACAAAGTACTACAACATCGT
GTTCCTGTGGGTTTCGCACCCACCCATCGTCTGGATCTGGCCTTCGCGCA
GCGGTGCAACCCATCCAGATGCACGCATGGGCCACAAAGTACTACAACAT
CGTGTTCCTGTGGGTTTCGCACCCACCCATCGTCTGGATCTGCGTCCTCC
GGCCGGTGCGCTCGGTACTGCGCCAAATCCCCGAGCGGCGGCGCAGCACC
GTCGAGCTGCTACTGGTGACGCCGATGTTGCGCAGGAGGTCGAGCACACT
CGGCAACGGCAACGCGGTCGTCCCGGCGGTCGCCGAGCCCGGCCGCAACC
GCGGCCACGCGTCGGACGAACACCGGCTAGCGGGCATCATGGGCTACCTC
CCCCTTCGGGAGGCGTTCGGAGAATTCTGTCGCAGATCGCTCTGCAGCGA
GCGTCCTCCGGCCGGTGCGCTCGGTACTGCGCCAAATCCCCGAGCGGCGG
CGCAGCACCGTCGAGCTGCTACTGGTGACGCCGATGTTGCGCAGGAGGTC
GAGCACACTCGGCAACGGCAACGCGGTCGTCCCGGCGGTCGCCGAGCCCG
GCCGCAACCGCGGCCACGCGTCGGACGAACACCGGCTAGCGGGCATCATG
GGCTACCTCCCCCTTCGGGAGGCGTTCGGAGAATTCTGTCGCAGATCGCT
CTGCAGCGAGTCATTCCAATTTCTGCTGGACGTGTCCGAGTTTAAAATTC
ATGTCCTCGAAGTTTCTGCCGATGAGAGCAACAAGAATACAGGCTTCATG
GGGTTCGGCAGCTACTTCGCCATTGTCAACGACTACATCAAAGACGGTTC
ACACTCGGAAGTCAACATCGACTTCAAAACCAAACGCGACATCCTGAAGT
ATGCCAAGTTCAAAGCCTACGCTTCTCTTGACCTGTCATTCCAATTTCTG
CTGGACGTGTCCGAGTTTAAAATTCATGTCCTCGAAGTTTCTGCCGATGA
GAGCAACAAGAATACAGGCTTCATGGGGTTCGGCAGCTACTTCGCCATTG
TCAACGACTACATCAAAGACGGTTCACACTCGGAAGTCAACATCGACTTC
AAAACCAAACGCGACATCCTGAAGTATGCCAAGTTCAAAGCCTACGCTTC
TCTTGACCTGGATGGTCGCCAGGAGATTTTCACGGCAGCCGAGCAAGAGA
TTAAAAAGATGCTCGTGGATGGTCGCCAGGAGATTTTCACGGCAGCCGAG
CAAGAGATTAAAAAGATGCTCGTGGACAACCTCTTGAACAAGTTCCTATC
ATCTGCCCAGTACAAGGAGGTCGTCGACTTCGAGGGCCGCAGCCAGGAAT
GAGACAACCTCTTGAACAAGTTCCTATCATCTGCCCAGTACAAGGAGGTC
GTCGACTTCGAGGGCCGCAGCCAGGAATGA
back to top