mRNA_P-fluviatile_contig10.615.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig10.615.1 vs. uniprot
Match: D8LTM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM1_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 5.790e-117 Identity = 402/927 (43.37%), Postives = 526/927 (56.74%), Query Frame = 1
Query: 544 LQISDSYEYFDTLDNDGPTLVSGQASS-LGKVKLGDNCVYSVDDVEPQVSEAFDLGMSFGDGPADCSAPESYVQQLGVRIVGCGFTMEDLVFQRMSAVTSCLGDVNSSDDGVESEVTTVAFGRSVPPACDEDEVLRSSLIAEIDSATTSVYPTSDTNAGVDSGAAIGTDSPAPASAGDPCLALLNVVYNVGDQRAFIAFRDYNPVPYEASGDKCQYRTISVTFSAWDGSAINAAFFNLGDDDLHGLQLSASIVVPADGSVDISSEKVSPGKMSEIDGFSSGSKGFDFAIGFDGEGDFIQVDLRGCGLTVDSFVGNRATIVVSDTGDRFQRSFTLGEESLSCAFQDTDSVTPSPVGT-LAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------GFPDTMAPTPLNPSTPRSSAPSXXXXXXXXXXXXXXXXXXP------AAAEQGGSVTGTLTVAGIDPATEDSAIFSAAQMGLADAFGLASADAVIAGPAGSDLGPPEAPVASAXXXXXXXXXXXXXXGGQGQSQGRRLRQERRWVVQHEPGANSTSVGIDFEVSLPVEGDDGTSPASLVADAVNGYATGGVFALADSLQVDPANINISNLAFCVSGLSSCGSATAI--TMSVIDELGTGGPWEEFLRNGGVLVIALFGTLFVCFCSAAVCYNCLFDGVAAEDHDVFKPVHGV----SHDKDRERVSPGIFDLSRKSSRRPRISDGDERGLFSTTSPKPAESGGEVKEGNRG---------MEVG-RAESLATEAASTAAGHWTAAQFGRKSSLDEYAAQNPLR--GSSFEELSDSAGSRRFTTMVRLAKIRNVNSIQIKYCTDVRSKKEQDSVPSDMVGHYADEEPEGEFKTTNPMFLGRDNGSRS 3174
++ISD Y +FD L + PT+VSG + + + + D+ V SV VEP+ +FD+G++FGDG DCS+ ++++Q++GV++VGCG T+ L FQ MS VT+CLG G+++EV TV FGRSVP +CD DEVL+ A +++A T+ + + S + A D C L+NVV G AFIA ++ P+ +E S D C+YRT+ VTF W GS+I AAFF+L D+ G +S IDG+ SGS GFDFAI FDG+ D + VDLRGCGLTVDSF GNRAT VV+ +G+ ++ LG+ SL C + TD+ P+ GT +P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX GFP ++AP+ N S XXXXXXXXXXXXXXXXXX G +VTG+LTV G D S S L+ ++I +DL VA A GGQ RRW+ + E + S +V IDFEVS+P + S AS VA VN +A G+ ALADSL V+P +I++S+LAFC+ G ++CG+ + + TMS +DELGT GPWE FL NGG+L++ALFGTL VCFC+A VC++CLF+G ED ++ KPV V + DK++E+VSP +FDLSR S+RR D D+ S G+ +G+RG ME G R S AT + + HW + QFG+K+S EY QNPLR G S E G+RRF M +++ E+ + ++GHY D+ EGEFKTTNPMFLG D S S
Sbjct: 1 MEISDDYSHFDKLGDFLPTVVSGDPDAEIEIIYMDDDSVESVGGVEPESGGSFDVGIAFGDG-RDCSSSQAFLQRVGVKVVGCGLTLAHLSFQGMSVVTTCLGA------GMDTEVATVGFGRSVPESCDTDEVLK----ASVEAAETASWD-------------YASGSTSSTWAADRCTELVNVVDAAGAS-AFIAIKEDEPLSFETSSDNCEYRTVGVTFETWAGSSIKAAFFDLEVDE---------------------------GNLSAIDGYESGSSGFDFAIAFDGDSDVVSVDLRGCGLTVDSFAGNRATFVVTGSGN----TYILGDSSLDCVVEFTDTPAPTSTGTTFSPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFPSSLAPSSSNSSMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVGGGAVGATVTGSLTVVGEDGRRRMSEPVSPT---LSRHVRRDETKSLIHHQPETDL------VAEARDPVGGFYGAL---GGQ-----------RRWLQEGEEDSGSETVDIDFEVSVPADDGGIGSSASRVAAMVNEFADSGLAALADSLGVEPEDISLSDLAFCI-GTTNCGNVSTMVSTMSAVDELGTSGPWENFLTNGGLLLLALFGTLCVCFCAAGVCFHCLFNGGGYEDVELLKPVPAVPAKHTVDKEKEQVSPRVFDLSRMSNRRLGAPDHDKH------------SDGDFPQGSRGDSKMGGGDFMEAGIRTVSPATSKTTIGSVHWMS-QFGQKNSA-EYDLQNPLRVPGDSVE------GTRRFGDMAM-----------------GKTQTEE----AGLIGHYGDDRSEGEFKTTNPMFLGADLDSAS 806
BLAST of mRNA_P-fluviatile_contig10.615.1 vs. uniprot
Match: A0A6H5JI45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI45_9PHAE) HSP 1 Score: 273 bits (697), Expect = 7.250e-70 Identity = 532/1345 (39.55%), Postives = 642/1345 (47.73%), Query Frame = 1
Query: 2191 ERRWVVQHEPGANSTSVG--IDFEVSLPVEGDDGTSPASLVADAVNGYATGGVFALADSLQVDPANINISNLAFCVSGLSSCGSATAI--TMSVIDELGTGGPWEEFLRNGGVLVIALFGTLFVCFCSAAVCYNCLFDGVAAEDHDVFKPVHGV----SHDKDRERVSPGIFDLSRKSSRRPRISDGDERGLFSTTSPKPAESGGEVKEGNRG---------MEVG-RAESLATEAASTAAGHWTAAQFGRKSSLDEYAAQNPLRGSSFEELSDSA-GSRRFTTMVRLAKIRNVNSIQIKYCTDVRSKKEQDSVPSDMVGHYADEEPEGEFKTTNPMFLGRDNGSRSSSPQPLVLSSSSSISVS-----------NLGSNNFTPLGGGGGSSGSTG---------------GXXSGFGSASWPAALPTSGAPPLSTVSMSMESRKAEERPMEVLS-CDGSDDS--DGEDKETGDISTPQPPVS---------------------FDTIAASGDISSASPAAGSGPVS---RAASPRTAIDAAQGTPDGEVGHGRGSSGXXXXXXXXXXXXE---EDELPTDAASCP------SLGTNLPPPPSPAQLSQPLTAAAPQEGW-------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIPSLWSKTWQGWIGGGRSGRRRSQSATAGTGASLSQQHP--------SATARWRGGSRGSPSASDRGTDSVSTASTTSRVAADVLSHPQPTSAESDLSLSEVFAGAVSPAGLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSPGTFASAKE----KEGERGKSP-----------PTMQGASHPTRLESPQKHSSPLTPPEAEFPAPF--------------SATGAVAPSATVGRGGGSVRKAGHLGLSLSSSSSSHKVVSPSGMMFSPGTDSEPGSSPSPETLIP-AGQIGSGXXXXXXXXXXXKMSAAATPRTGTAGSTPWVTTQAGTRAAQREQEKKHEEEVAGA-RFKGQPAESSLWGA----PAAGGGSGGGKGSVGAATGPMHTTAVAAASTGRQATSEEARGGRLAARSGKMRALGTLDVMQVVGASFSDSESVSEDV--EETSPRAXXXXXXXXXXXXRRGQAF----------------GTNRPASPINTSDTQXXXXXXXXXXAAASP------------LPHIQAG-------PLFPGAPSPRPGYSPGVEST-EYSESDDDDTPGGGMLKGEGLI 5700
+RRW+ + E +DFEV++P + + S AS VA VN +A G+ LAD L V+P ++++S+LAFC+ G + CG+ + + TMS +DELGT GPWE FL NGG+L++ALFGTL VCFC+A VC++CLF+ A ED + KP V + DK++E+VSP + DLSR S+RR R+ P S G+ +G+RG ME G R S AT + + HW + QFG K+S EY QNPLRG DS G+RRF M + R + + + V K + ++ + ++GHY D+ EGEFKTTNPMFLG D S S +L SNN PL G GGS G SG S S P L GA + + S+ + + VLS D S D DG DK GD + P V+ ++ SP G G V +ASP + G GR ++G E ED DAA+ P L + P P+Q S A + G R XXXXXXX XXXXXXXXXXXXXX S W TWQG + G S R RS++ T GT +S S+Q SATARW + T R+ ADVLSHP SAESD SLSEVFAGAVSPAGLAAXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G +A E G G P P MQGAS P RL SPQ+ S P TP A A A V G G G LGL+LSS H V PS +M SPGTDS+PGSSPSPE L+ + + SG A AAQ+E+E + E A + P+ + G P+A S GS +GP + + G+ A +EAR G LA RSGKMRALGTLD+MQVVG +FSDSES S+D+ EETSPRA G RP+SPI T Q XXXXXXXXX LP IQAG FPG PRPGYSPG++S+ EYSESDDDDTPGGGMLKGE L+
Sbjct: 730 QRRWLQEEEXXXXXXXXXXDMDFEVTVPADDGEIGSSASRVAAMVNEFADSGLATLADYLGVEPDDLSLSDLAFCI-GSTDCGNVSTVVSTMSAVDELGTSGPWENFLTNGGLLLLALFGTLCVCFCAAGVCFHCLFNDGAYEDVEHLKPAPVVPAKHTVDKEKEQVSPRVIDLSRMSNRRLRV-------------PDDKHSDGDFPQGSRGGSKMGGGDFMEAGIRTVSPATSKTTIGSVHWMS-QFGHKNSA-EYDLQNPLRGPG-----DSVEGTRRFGDMAMDVRARWLRAA-FEALAGVGIKGKTETEEAGLIGHYRDDRSEGEFKTTNPMFLGADLDSASXXXXXXXXXXXXXXXXXXXXXXXXXYGVSLSSNN--PLFGTGGSXXXXXXXXXXXXXXXXAVRRGALSG--SRSPPTML---GAAGNRSSNGSIGRMNSADVATAVLSERDESSDGFEDGGDKPPGDDALPDIFVARRSPXXXXXXXXXXXXXXXXXXXXXXRGRVVTPTSPLGGGGDVYGGLASASPSVSPAVVMGGSSA----GRAAAGLGVALAAQAGGGESGSEDGFSEDAAASPWSDEREGLRPSSKLPSDPSQESSTAGAKTTRSGTAVSKEAAVVAAEARSVEEHGQVAEGAPAXXXXXXXVSAERRAGIAEQTAPAPGASDTRRGSXXXXXXXXXXXXXXXXISAWRNTWQGLMSVGSS-RGRSRTQTGGTASSPSRQSXXXXXXXXXSATARWSSPRDAPATXXXXXXXXXXXXXXTGRIVADVLSHPTIVSAESDFSLSEVFAGAVSPAGLAAXXXXXXXXXXFRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERTADEGPPAAAGRSGVQPAIGTATREVSTPQMQGASMPGRLGSPQELS-PTTPXXXXXXXXXXXXXXXXXXXXXVSEAAAMTADPAEVSGGDGRT-VLGRLGLTLSS----HNEVFPSRVMLSPGTDSDPGSSPSPEVLVRRSSRPFSGGDAGQEGFAPHPQEEGA--------------------AAQKEEETEIGEGAQSAVTHEPTPSPDDVHGVTVSPPSASDSS---LGSNLWCSGPFARSTFGKSMGGQGA--DEARDGLLATRSGKMRALGTLDLMQVVG-TFSDSESPSDDIDIEETSPRARAAAASNSPRPKSXXXXXXXXXXXRLSVLPALGSGATRPSSPIITQQPQQXXXXXXXXXXXXXXXXXXXXXXXXXXLPPIQAGLEGIMAGVHFPGEALPRPGYSPGMDSSREYSESDDDDTPGGGMLKGERLV 2008 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig10.615.1 >prot_P-fluviatile_contig10.615.1 ID=prot_P-fluviatile_contig10.615.1|Name=mRNA_P-fluviatile_contig10.615.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1847bp MRLDARKQRVMSLEAAADVEGAAGRGRMAQGRRRRQRPWRRQQRRLWSATback to top mRNA from alignment at P-fluviatile_contig10:76029..96146- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig10.615.1 ID=mRNA_P-fluviatile_contig10.615.1|Name=mRNA_P-fluviatile_contig10.615.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=20118bp|location=Sequence derived from alignment at P-fluviatile_contig10:76029..96146- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig10:76029..96146- >mRNA_P-fluviatile_contig10.615.1 ID=mRNA_P-fluviatile_contig10.615.1|Name=mRNA_P-fluviatile_contig10.615.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=11082bp|location=Sequence derived from alignment at P-fluviatile_contig10:76029..96146- (Porterinema fluviatile SAG_2381)back to top |