mRNA_P-fluviatile_contig1.514.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.514.1 vs. uniprot
Match: D7G7A8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A8_ECTSI) HSP 1 Score: 277 bits (709), Expect = 4.350e-88 Identity = 136/190 (71.58%), Postives = 151/190 (79.47%), Query Frame = 1
Query: 691 MRGATTIQIGESGWGAQRPIILQGGKPASKEGHLRLPDQFYQGLHFGMSAWNAWGEKLPDNENGRRNRALRETLEGLHPNPTAIYSTVFEGGVEGFTVAFLAGALGEQEERSVREMSDPVWAEAEGAVLRAARGFQQLLVMKWSPKVWGPGHEDDKHLHTSVLQEVLPTRTGLRRLASTLAVYRVAEAGP 1260
MRGATTI IG+ G G+ R +ILQG A KEGHLRLPDQF+QG+HFG+SAW+ WGEKL D EN +RN ALR+ LEG P PT IY T+FEGGVEGFTVAFLAG+L QE RSVRE SDP WAEAE +VL AAR FQQL V KW PKVWGPGHE D++LHTSVLQEVLPTRTGLR L S + VYRV A P
Sbjct: 1 MRGATTITIGDGGRGSHRQVILQGATVAPKEGHLRLPDQFFQGVHFGVSAWDVWGEKLMDAENRKRNGALRQVLEGQDPQPTFIYPTMFEGGVEGFTVAFLAGSLSRQEMRSVRERSDPAWAEAETSVLTAARHFQQLTVTKWHPKVWGPGHERDENLHTSVLQEVLPTRTGLRALTSAVVVYRVETAVP 190
BLAST of mRNA_P-fluviatile_contig1.514.1 vs. uniprot
Match: A0A7S2SW41_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW41_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.300e-19 Identity = 79/261 (30.27%), Postives = 122/261 (46.74%), Query Frame = 1
Query: 532 YVLLATLVGAVVSFFAVTHL------SSHERGAGAADTPRSPG-----RRIPSAEEQAMLHDFWMRGATTIQIGESGWGAQRPIILQGGKPASKEGHLRLPDQFYQGLHFGMSAWNAWGEKLPDNENGRRNRALRETLEGLHPNPTAIYSTVFEGG-----VEGFTVAFLAGALGEQEERSVREMSDPV-WAEAEGAVLRAARGFQQLLVMKWSPKVWGPGHEDDKHLHTSVLQEVLPTRTGLRRLASTLAVYRV-AEAGP 1260
Y LLA LV V S++A+ ++H A +T + R +PS EE L ++I + S ++ P H++LPD++Y+ +H G+S ++ + +++ L + L L P PTA+ V E +EG+ V F L Q+ +R D WA+A AV AR + QLL+M+W WG +D H+SVLQE++P R+GL+ L S+ YRV AE P
Sbjct: 76 YTLLAMLVALVASYYALVGQYGKVGKTTHTVEGIARNTQEARAFVQRVRTLPSTEEMEDLKYSLSHSVSSIGVSMSENVTLGTLVKP--HPMHGHSHMKLPDEWYKCVHIGVSTYDMVSPNNTREDQRQQSSELYDALISLTPEPTAVLPWVCETNTTYWTIEGWAVRFCYDHL--QDLGFLRPGVDKARWAKASKAVESVARRYDQLLIMQWYSYEWGHPPDDSSDPHSSVLQEIVPIRSGLQPLRSSAVAYRVNAELPP 332
BLAST of mRNA_P-fluviatile_contig1.514.1 vs. uniprot
Match: A0A836CRC1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRC1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.740e-11 Identity = 42/97 (43.30%), Postives = 50/97 (51.55%), Query Frame = 1
Query: 970 EGFTVAFLAGALGEQEERSVREMSDPVWAEAEGAVLRAARGFQQLLVMKWSPKVWGPGHE-------DDKHLHTSVLQEVLPTRTGLRRLASTLAVY 1239
EGF V + +L + + P+W A AVLR AR FQQ V +W P VWG G D H HTSVLQ V PTRTGL+ L S+ Y
Sbjct: 254 EGFIVEYALSSLAAAAGGAKHTRAAPIWGPAREAVLRTARHFQQFAVYEWYPTVWGEGAAAAAAGVGGDAHRHTSVLQVVTPTRTGLQALRSSAVAY 350
BLAST of mRNA_P-fluviatile_contig1.514.1 vs. uniprot
Match: A0A7S2CPZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPZ2_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 4.010e-10 Identity = 62/250 (24.80%), Postives = 97/250 (38.80%), Query Frame = 1
Query: 643 RRIPSAEEQAMLHDFWMRGATTIQIGESGWGAQRPIILQGGKPASKEGHLRLPDQFYQGLHFGMSAWNAWGEKL--------------------PDNENGRRNRA----------------LRETLEGLHP-NPTAIYS-------TVFEGGVEGFTVAFLAGALGEQEERSVREMSDPVWAEAEGAVLRAARGFQQLLVMKWSPKVWGPGHEDDKHLHTSVLQEVLPTRTGLRRLASTLAVYRVAEAGP 1260
RRIP+ EQ + + + + + G + + RLP+ +Y +H G+SA + + L PD+ R + E L L P P+A+ + T + V+G+ V F L Q E + A V AR F Q +V+ W P WG G D+HLHT+VLQE++PTR+G++ + S V+R+ P
Sbjct: 186 RRIPAEHEQMAMKRALLYSHSVVGVSADEEGTNVTLGMFARSDFEDVAQARLPEVWYHCMHVGVSALDFFDPDLASLSVSDWDDDEFYSTLHESPDDREWHEERGEAWKARKLEVDQNSVEMLEQLWDLRPARPSAVLNWDIASNVTSWPWRVQGWVVRFCPEDLAAQGELGSGPTPKSRFEHAAEGVAVVARRFGQNIVLHWYPHQWGKGALHDEHLHTNVLQEIVPTRSGMQAVRSHGVVWRIGGPVP 435 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.514.1 >prot_P-fluviatile_contig1.514.1 ID=prot_P-fluviatile_contig1.514.1|Name=mRNA_P-fluviatile_contig1.514.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=377bp MVLDTFSEERHPVQRRVSYRRLREEENSEGNNHGGILLSRTSQLGLLYDDback to top mRNA from alignment at P-fluviatile_contig1:5649496..5653939+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.514.1 ID=mRNA_P-fluviatile_contig1.514.1|Name=mRNA_P-fluviatile_contig1.514.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4444bp|location=Sequence derived from alignment at P-fluviatile_contig1:5649496..5653939+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:5649496..5653939+ >mRNA_P-fluviatile_contig1.514.1 ID=mRNA_P-fluviatile_contig1.514.1|Name=mRNA_P-fluviatile_contig1.514.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2262bp|location=Sequence derived from alignment at P-fluviatile_contig1:5649496..5653939+ (Porterinema fluviatile SAG_2381)back to top |