prot_P-fluviatile_contig23.5111.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig23.5111.1
Unique Nameprot_P-fluviatile_contig23.5111.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length214
Homology
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.770e-47
Identity = 106/166 (63.86%), Postives = 115/166 (69.28%), Query Frame = 0
Query:    3 GVVRVGVITPYRGQVQCIRQVL---GRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLVADS-QAPDGGDGGRRSRDPRVDSGEELCARLEGGAV 164
            GVVRVG+ITPYRGQV CI+Q L   G GRRLKGG EDGGVD EVSTVDGFQG+EVDVVLFSCVRAPSS            IGFLADQRRMNVA+TRAR SLI+LGN  RLS+DA W ALVDH+ S  RL  +  +A   G       D     GE LCARLE  A 
Sbjct:  126 GVVRVGIITPYRGQVHCIQQELSGGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXXXXX--IGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTSGGXXXXXXD-----GEALCARLEKAAA 284          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.750e-45
Identity = 103/165 (62.42%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    3 GVVRVGVITPYRGQVQCIRQVLG------RGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLVADS-QAPDGGDGGRRSRDPRVDSGEELCARLE 160
            GVVRVGVITPYRGQV CI+Q L          RLKGG EDGGVD EVSTVDGFQG+EVDVVLFSCVRAPSS     G      IGFLADQRRMNVA+TRAR+SL+VLGN  RLS+D  W+ALVDH+ S  RL  ++ +A   G       D     GE LCARLE
Sbjct:  601 GVVRVGVITPYRGQVHCIQQELSGXXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSS-----GXXXXXXIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLEPEAVKARTSGGXXXXXXD-----GEALCARLE 755          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A2E8QK80_9EURY (AAA_12 domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E8QK80_9EURY)

HSP 1 Score: 104 bits (260), Expect = 1.860e-24
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 GRGVVRVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASS 124
            G  +  +G++TPY GQV+ IR +L           +  + VEV TVDG+QGRE DV++FSCVR+ S  N          +GFL+D+RR+NVA+TR+++ L+V+GN   L  D +WR+ +DH  S
Sbjct:   81 GLDLTDIGIVTPYAGQVRAIRDIL----------PESMMGVEVRTVDGYQGREKDVIIFSCVRSNSEGN----------VGFLSDRRRLNVALTRSKRGLVVIGNPDTLRHDDDWRSWIDHVRS 184          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A7S2BRX3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BRX3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.540e-24
Identity = 58/133 (43.61%), Postives = 80/133 (60.15%), Query Frame = 0
Query:    3 GVVRVGVITPYRGQVQCIRQVLGRG------RRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLV 129
            G + V V+TPY+ Q+  +RQ LGR          +GG++  G +V V TVDGFQGRE +VV+ SCVR             GG IGFL+D RR NVA+TRAR  L++LGNAR L    +W  L+++  +  R++
Sbjct:    1 GSLPVVVLTPYKAQIDLVRQALGRKLENSHQETREGGSDSAGQEVTVCTVDGFQGREAEVVVMSCVRTQR----------GGRIGFLSDLRRQNVALTRARHCLVLLGNARALREHEDWAPLIEYLGAMKRVL 123          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.640e-23
Identity = 65/140 (46.43%), Postives = 86/140 (61.43%), Query Frame = 0
Query:    6 RVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAG-FGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLVADSQAPDGGDGGRRS 144
            R+GVI PYR Q++ ++    RG    G   DG   VEVSTVDGFQGRE D+++FSCVRAP    +G  G   GGGIGFL D RR+NVAITRA+ ++ ++G+A  L    +WR L++ +      + DS  P     GR S
Sbjct:  940 RIGVIAPYRNQIRALQ----RGMWSTGLRHDG---VEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRNAFI-DSSNPGATSSGRNS 1071          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A699ZEB2_HAELA (AAA domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZEB2_HAELA)

HSP 1 Score: 102 bits (255), Expect = 2.170e-23
Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 0
Query:    1 GRGVVRVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDV-------EVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLVADSQA 134
            G   V +GV+TPY  QVQ I ++L R        + GG  V       EV +VDGFQGRE++ V+FSCVRA +           G +GFL D RR+NVAITRAR+ LI++GN   L TD +W AL+ +    G LV D++A
Sbjct:   94 GMAAVDIGVVTPYTAQVQLITRMLQRMPPNPSVLQGGGCGVTSDARGVEVKSVDGFQGREMEAVVFSCVRANAQ----------GQVGFLDDWRRLNVAITRARRGLIIVGNTATLMTDPHWAALITNLQERG-LVTDARA 223          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A2V0P7C4_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7C4_9CHLO)

HSP 1 Score: 107 bits (266), Expect = 3.750e-23
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 0
Query:    3 GVVRVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHA 122
            G + V VI+PY+ QV+ +R++     +  G  E     V+V+T+DGFQGRE DVV+FSCVR+  ++          GIGF+AD+RR+NV +TRAR +L+V+GNAR LS DA WR LV  A
Sbjct:  498 GSLSVAVISPYKAQVKLLREMFDAFLQPLG--EAAAKSVDVNTIDGFQGREKDVVIFSCVRSTDAARRR-------GIGFVADERRINVGLTRARSALLVIGNARSLSVDARWRGLVGSA 608          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A152A0W9_9MYCE (DNA2/NAM7 helicase family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A0W9_9MYCE)

HSP 1 Score: 107 bits (266), Expect = 3.880e-23
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0
Query:    6 RVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLV 129
            R+GVI+PY+ QV  +R+     +   G        V + TVDGFQGRE ++++FSCVRAP           G GIGFLAD RRMNVAITR R SLI++GN+R LS + +W  L+ HA  +  L+
Sbjct:  742 RIGVISPYKQQVLTLREYF---KSFPG--------VSIDTVDGFQGREKEIIIFSCVRAPEDK--------GSGIGFLADVRRMNVAITRPRSSLIIVGNSRALSVNPDWNDLIKHAKDAHNLI 846          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A834WCZ5_9FABA (Helicase SEN1-like n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WCZ5_9FABA)

HSP 1 Score: 106 bits (265), Expect = 5.760e-23
Identity = 62/125 (49.60%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    6 RVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASSSGRLVA 130
            R+G+ITPY+ QV  +R      R L         D+E +TVDGFQGREVD++L S VRA  SS+A     +   IGF+AD RRMNVA+TRAR SL +LGNAR L T+ NW ALV  A     +++
Sbjct: 1375 RIGIITPYKYQVSLLRS-----RFLNAFGSSNIADMEFNTVDGFQGREVDILLLSTVRAAHSSSAA-SRINSSSIGFVADIRRMNVALTRARLSLWILGNARTLQTNYNWAALVKDAKERNLIIS 1493          
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Match: A0A2D9QML5_9EURY (AAA domain-containing protein n=5 Tax=Archaea TaxID=2157 RepID=A0A2D9QML5_9EURY)

HSP 1 Score: 106 bits (264), Expect = 6.430e-23
Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    7 VGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQGREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSLIVLGNARRLSTDANWRALVDHASS 124
            +G++TPY GQV+ IR ++    +          DVEV TVDG+QGRE DV++FSCVR+ S  N          +GFL+D RR+NVA+TR+R+ LIV+G+   L  D NWRA +DH  S
Sbjct:  541 IGIVTPYAGQVRAIRDIIPESMQ----------DVEVRTVDGYQGREKDVIIFSCVRSNSDGN----------VGFLSDGRRLNVALTRSRRGLIVVGDPDTLRHDDNWRAWIDHIRS 638          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig23.5111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8A4_9PHAE1.770e-4763.86AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LLI3_ECTSI1.750e-4562.42Presumed helicase required for RNA polymerase II t... [more]
A0A2E8QK80_9EURY1.860e-2442.74AAA_12 domain-containing protein n=1 Tax=Euryarcha... [more]
A0A7S2BRX3_9STRA6.540e-2443.61Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
D8LE51_ECTSI1.640e-2346.43SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A699ZEB2_HAELA2.170e-2344.68AAA domain-containing protein (Fragment) n=1 Tax=H... [more]
A0A2V0P7C4_9CHLO3.750e-2348.33Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A152A0W9_9MYCE3.880e-2346.77DNA2/NAM7 helicase family protein n=1 Tax=Tieghemo... [more]
A0A834WCZ5_9FABA5.760e-2349.60Helicase SEN1-like n=1 Tax=Senna tora TaxID=362788... [more]
A0A2D9QML5_9EURY6.430e-2346.61AAA domain-containing protein n=5 Tax=Archaea TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 6..106
e-value: 9.0E-32
score: 110.3
NoneNo IPR availableGENE3D3.40.50.300coord: 4..134
e-value: 2.6E-37
score: 130.1
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 6..151
NoneNo IPR availablePANTHERPTHR10887:SF382HELICASE SENATAXIN-RELATEDcoord: 6..151
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig23contigP-fluviatile_contig23:669972..671059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig23.5111.1mRNA_P-fluviatile_contig23.5111.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig23 669971..671059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig23.5111.1 ID=prot_P-fluviatile_contig23.5111.1|Name=mRNA_P-fluviatile_contig23.5111.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=214bp
GRGVVRVGVITPYRGQVQCIRQVLGRGRRLKGGAEDGGVDVEVSTVDGFQ
GREVDVVLFSCVRAPSSSNAGFGGFDGGGIGFLADQRRMNVAITRARQSL
IVLGNARRLSTDANWRALVDHASSSGRLVADSQAPDGGDGGRRSRDPRVD
SGEELCARLEGGAVECSLSEIDADINRVRSGRRGLRRSSPDEDRVRARGS
SPDEGRAHGGGGGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase