prot_P-fluviatile_contig1.471.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.471.1
Unique Nameprot_P-fluviatile_contig1.471.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length221
Homology
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BLAST of mRNA_P-fluviatile_contig1.471.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 6.780e-17
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0 
Query:  148 PLEARCVDDDPCAGTCGEFQECAKYDKNGKYYCSDTCDGNP-CGDGTRCRTRPKRWCRKTDFGGCPRKRRC 217
            P  A C   + C G C + QEC +Y +NGKYYCSDTCD    C +G  C TRP++WCR + + GCP KRRC
Sbjct:  215 PPVASCEATENCDGACDDTQECLQYARNGKYYCSDTCDSPAACEEGEECSTRPRKWCRSSGYDGCPEKRRC 285
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN7_ECTSI6.780e-1752.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.120coord: 46..153
e-value: 5.5E-9
score: 38.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.628
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 48..177
e-value: 6.7E-9
score: 35.8
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 50..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5219230..5223521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.471.1mRNA_P-fluviatile_contig1.471.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5218428..5223573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.471.1 ID=prot_P-fluviatile_contig1.471.1|Name=mRNA_P-fluviatile_contig1.471.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
MVTPRILSAAATLTFLLTSTPQQTNACSCLDVSYTPCDFVQGIAPPKATD
VVRATALRSSPAPTDISDDFAFVEVVYTVKVVEVFKGDASCGQEISFVTD
DPALCGIMLQIGVEYALALSPSSSGQLAIGYCGLYRRWDDIPDEEMAPLE
ARCVDDDPCAGTCGEFQECAKYDKNGKYYCSDTCDGNPCGDGTRCRTRPK
RWCRKTDFGGCPRKRRCLAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold