prot_P-fluviatile_contig9.15409.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15409.1
Unique Nameprot_P-fluviatile_contig9.15409.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length503
Homology
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: D8LM04_ECTSI (CID domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM04_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 2.790e-154
Identity = 326/513 (63.55%), Postives = 350/513 (68.23%), Query Frame = 0
Query:    1 MGKVTVEEYLSLFRAKAEQMGEFPDRVIINALTGTAQRHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPAAAPSYSAPPPPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATFXXPHVALAPSXXXXXXXXXXXXXXXXXXXXXXPVSAVTLQGAP------------------------DIPAMINARMKQLLDQQLLELGESNTMSLDDLWRTNAELASGFRLVAQAQVHEQLGLPXXXXXXXXXXXXXXXXXQQLPAPQQAPPQLLPDFGRAVQVADEVAAGARMALDASLRGDLSGAQVQAAEAAGKAAMLACLLGGDSMVA-GAGEGGIGRGXXXGRGAGVYLADLDPLDPRALARGNPAGVRRLYGEGFPFWCKQDGTRFGTQVQLDAHMDLLFRRKRARREQKG-AASREWYCTAEEWMTDFGRLAPQAGS 487
            MGKVT+EEY+ LFR KAEQMGEFPD++IINALTGTA+RH  DKAQAI T+LQNML+DP HPAKHKLPICFLVDS+VKNI++P+ADLFE  LTRWFCSAYDAVDEKSK+HLGRVVATWEVQS+FSADKRKEIQR+MLN++PAAA               XXXXXXXXXXXXXXXXXXXXXXXXXX      P+    P XXXXXXXXXXXXXXXXXXXXXX  SAV                              DI AM+++RMKQLLDQQ                                                                         DFGRAVQVA+EVAAGAR+ALDASLRGDLSGAQVQAAEAAGKAAMLACLLGGD+  A G G GG G G       GVYLADLDPLD R+LARGNPA VRRLYGEGFPFWCKQDGTRF  Q QLDAHMDLLFRRK ARREQKG AASREWYCT EEWMTDFGRLAP AGS
Sbjct:    1 MGKVTLEEYIDLFRGKAEQMGEFPDKIIINALTGTAKRHRTDKAQAIATVLQNMLMDPSHPAKHKLPICFLVDSLVKNITDPFADLFENGLTRWFCSAYDAVDEKSKKHLGRVVATWEVQSIFSADKRKEIQRYMLNAKPAAA------------SLSXXXXXXXXXXXXXXXXXXXXXXXXXXPLPTVAPYQPPQPQXXXXXXXXXXXXXXXXXXXXXXXASAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQAMVDSRMKQLLDQQ-------------------------------------------------------------------------DFGRAVQVANEVAAGARVALDASLRGDLSGAQVQAAEAAGKAAMLACLLGGDAAAAVGGGLGGAGAG------VGVYLADLDPLDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGS 422          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: A0A835ZEB3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.410e-12
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   47 ITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHM 135
            I  LL+ ++ D     + KLP+C+L+DSI+KN+  PY  LF  ++  W+ +AY+AVD K+K  + RV+ TWE  S+F  D    ++ H+
Sbjct:   40 IVALLEGLIADRGVQPQRKLPLCYLIDSILKNVPSPYVKLFGRNVGHWYLAAYEAVDAKAKHSMSRVLGTWETTSMFPPDVLAVMRAHV 128          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: A0A7S4J5Q0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5Q0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.150e-11
Identity = 44/140 (31.43%), Postives = 73/140 (52.14%), Query Frame = 0
Query:    6 VEEYLSLFRAKAEQMGEFPDRVIINALTGTAQRHSADKAQAITTL--LQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPAAA 143
            +EEY  +     EQ+G F D+VIIN+L+  A+     K  A++    ++++L+     +  KLP+ +LVDSI+KN+   +  L E+D   W   A+D V ++ K+ + RV  TW    +F     K + R     +  AA
Sbjct:   47 LEEYQEML----EQLGNFADKVIINSLSMVAEDFKDSKKAAVSIYGCIRDLLMSRTISSDRKLPLVYLVDSILKNVKGQFIPLVELDAKEWLAVAHDVVSDEQKKKIRRVWNTWREFRIFGEGSLKAMGRCFSEFDAQAA 182          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: A0A448YWT6_9STRA (CID domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWT6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.970e-9
Identity = 37/134 (27.61%), Postives = 70/134 (52.24%), Query Frame = 0
Query:    7 EEYLSLFRAKAEQMGEFPDRVIINALTGTAQRH--SADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNS 138
            +E L  ++   E +G   ++V IN L+  A+ +  S+  A+AI  +++  L+     +  KLP+ +LVDSI+ N+   +  L E D   W  S Y  + ++++  L ++   W  + +F+ DK +EI     +S
Sbjct:   33 DEQLEEYKEMVEDLGTRAEKVKINTLSMVAEDYADSSRNAKAIYNIIREPLISTAVHSDRKLPLVYLVDSILYNVKGQFIPLVENDAANWLPSVYQVLSQENRAKLEKIWNLWNSRKIFAQDKLEEIGSFFTSS 166          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: W7U5A9_9STRA (Pre-mrna cleavage complex 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5A9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.250e-8
Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 0
Query:   10 LSLFRAKAEQMGEFPDRVIINALTGTAQRHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSE 139
            L +F+    ++G  PD+ II  LT  A +H  D    +  L+Q+ +L    P   +LP+C+L+DSI++NI   Y  LF        C  Y+   ++ ++ + +++  W  + VF A     I  H+   E
Sbjct:   10 LGVFQEDMGRLGGHPDKDIIVRLTHIAMQHQ-DLGNDLVELIQSRVLSSHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIE 138          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: A0A8J2HMP7_COTCN (Similar to PCF11: Pre-mRNA cleavage complex 2 protein Pcf11 (Homo sapiens) n=3 Tax=Cotesia TaxID=32390 RepID=A0A8J2HMP7_COTCN)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-8
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   22 EFPDRVIINALTGTAQRHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPA 141
            +F  + +IN LT  A   + + A AI   ++N LL     ++ KLP+ +L+DSIVKN+S  Y  LF   +   FCS ++ VDE ++  + ++  TW    VF A K   +  H+ N +PA
Sbjct:   24 KFNSKPLINMLTMLAD-DNVEHAPAIVQAIENHLLQVS--SEVKLPVLYLIDSIVKNVSGAYLKLFTDKIVNIFCSVFEKVDESTRLCMWKLRQTWG--EVFPAKKLFSLDIHVRNIDPA 138          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: UPI001F5F43C2 (pre-mRNA cleavage complex 2 protein Pcf11-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5F43C2)

HSP 1 Score: 67.4 bits (163), Expect = 2.820e-8
Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = 0
Query:    1 MGKVTVEEYLSLFRAKAEQMGEFPDRVIINALTGTAQ---RHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPA 141
            M  V  EEY S              + +IN LT  A+    H+    QA+   LQ +      P+  KLP+ +L+DSIVKN+   Y  LF  ++   FCS ++ VDEK++  + ++  TW    VF A K   +   + + +PA
Sbjct:    1 MSNVAAEEYASSLSDLTVN-----SKPLINMLTMLAEDNIEHAPAIVQAVEKHLQKV------PSDIKLPVLYLIDSIVKNVGHAYIPLFTQNIVSTFCSVFEKVDEKTRAQMFKLRQTWN--DVFPAKKLYAVDLRVSSIDPA 131          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: UPI0007382122 (uncharacterized protein LOC107041696 isoform X1 n=3 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007382122)

HSP 1 Score: 68.2 bits (165), Expect = 2.880e-8
Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 0
Query:   28 IINALTGTAQRHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPAAAPSYSAPP 150
            +IN LT  A+  + + A+AI   ++N L   E  +K+KLP+ +L+DSIVKN++  Y +LF  ++   FC  ++ VDE ++  + ++  TW    VF A K   +   + + +PA  P  ++PP
Sbjct:   27 LINMLTMLAE-DNVEHAEAIVEAVENHLQKVE--SKYKLPVLYLIDSIVKNVNGAYLNLFTQNIVNTFCGVFEKVDEATRASMWKLRQTWN--GVFPATKLYSLDVRVQSIDPAW-PITASPP 143          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: UPI0004CD9FC3 (uncharacterized protein LOC103577908 n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CD9FC3)

HSP 1 Score: 68.2 bits (165), Expect = 2.880e-8
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   28 IINALTGTAQRHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPA 141
            +IN LT  A+  + D A AI   ++N LL      K  LP+ +L+DSIVKN+S  Y  LF  ++   FC+ ++ VDE ++  + ++  TW    VF A K   +  H+ N +PA
Sbjct:   30 LINMLTMLAE-DNVDHASAIVKAVENHLLKVSSDVK--LPVLYLIDSIVKNVSGAYLKLFTDNIVSIFCNVFEKVDESTRLSMWKLRQTWG--EVFPAKKLFTLDVHVRNIDPA 138          
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Match: A0A2P8XV91_BLAGE (CID domain-containing protein n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XV91_BLAGE)

HSP 1 Score: 67.0 bits (162), Expect = 4.630e-8
Identity = 36/114 (31.58%), Postives = 64/114 (56.14%), Query Frame = 0
Query:   28 IINALTGTAQRHSADKAQAITTLLQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYDAVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPA 141
            +IN LT  A  +       + T+ +++    + PA+ KLP+ +L+DSIVKN+ + Y  LF  ++   FCS ++ VDEK++ ++ ++  TW    VF A K   +   + + +PA
Sbjct:   33 LINMLTMLAHENITYAPVIVQTVERHL---QQVPAERKLPVLYLIDSIVKNVGDTYTTLFTQNIVSTFCSVFEKVDEKTRANMFKLRQTWN--EVFPAKKLYAVDVRVNSIDPA 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM04_ECTSI2.790e-15463.55CID domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZEB3_9STRA1.410e-1239.33CID domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S4J5Q0_9STRA2.150e-1131.43Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A448YWT6_9STRA7.970e-927.61CID domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
W7U5A9_9STRA1.250e-828.46Pre-mrna cleavage complex 2 protein n=3 Tax=Monodo... [more]
A0A8J2HMP7_COTCN1.660e-835.00Similar to PCF11: Pre-mRNA cleavage complex 2 prot... [more]
UPI001F5F43C22.820e-831.25pre-mRNA cleavage complex 2 protein Pcf11-like n=2... [more]
UPI00073821222.880e-833.33uncharacterized protein LOC107041696 isoform X1 n=... [more]
UPI0004CD9FC32.880e-835.96uncharacterized protein LOC103577908 n=1 Tax=Micro... [more]
A0A2P8XV91_BLAGE4.630e-831.58CID domain-containing protein n=1 Tax=Blattella ge... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 12..136
e-value: 1.9E-4
score: 21.5
IPR006569CID domainPROSITEPS51391CIDcoord: 1..139
score: 21.39
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 5..143
e-value: 8.8E-24
score: 85.9
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 23..136
IPR006903RNA polymerase II-binding domainPFAMPF04818CTD_bindcoord: 65..123
e-value: 8.1E-7
score: 29.8
NoneNo IPR availablePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 139..491
coord: 23..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:3695457..3698644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15409.1mRNA_P-fluviatile_contig9.15409.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 3694992..3700300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15409.1 ID=prot_P-fluviatile_contig9.15409.1|Name=mRNA_P-fluviatile_contig9.15409.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=503bp
MGKVTVEEYLSLFRAKAEQMGEFPDRVIINALTGTAQRHSADKAQAITTL
LQNMLLDPEHPAKHKLPICFLVDSIVKNISEPYADLFEVDLTRWFCSAYD
AVDEKSKRHLGRVVATWEVQSVFSADKRKEIQRHMLNSEPAAAPSYSAPP
PPTVPSAPAPTATPAATAVHPPLPGAPPLPAAPPSATFPPPHVALAPSAP
VAPPAAAAMAAPLPPPPPLPPVSAVTLQGAPDIPAMINARMKQLLDQQLL
ELGESNTMSLDDLWRTNAELASGFRLVAQAQVHEQLGLPPPPPPPAIVVP
PPQQQHQQLPAPQQAPPQLLPDFGRAVQVADEVAAGARMALDASLRGDLS
GAQVQAAEAAGKAAMLACLLGGDSMVAGAGEGGIGRGDGGGRGAGVYLAD
LDPLDPRALARGNPAGVRRLYGEGFPFWCKQDGTRFGTQVQLDAHMDLLF
RRKRARREQKGAASREWYCTAEEWMTDFGRLAPQAGSGAGGGEPGGDDGG
GG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS
IPR006903RNA_pol_II-bd