prot_P-fluviatile_contig9.15353.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15353.1
Unique Nameprot_P-fluviatile_contig9.15353.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length411
Homology
BLAST of mRNA_P-fluviatile_contig9.15353.1 vs. uniprot
Match: A0A6H5JFK6_9PHAE (START domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFK6_9PHAE)

HSP 1 Score: 544 bits (1401), Expect = 3.860e-190
Identity = 276/415 (66.51%), Postives = 325/415 (78.31%), Query Frame = 0
Query:    1 MSSDLAPSHGDVQHCKPDPGLQYLREMNLTKEEETHYASLARSWVPALIKCEAN-EGWKLVSTLFGVKIWSKPT---SNSSLVICKGQIPLSSDVTLEFVQTQFVNAYNTSETLAQEMRNSDVMSRETKILYQVPCQDNEFIRIIWGSFKAAGVAWARDFCMMQHAYPTTDPDTDERLFCVVGGSIERPEVPDMEKLCKRIRASAKTSGFVFREPKDGGPLRLTYVVNVNPNGWIPHRVVNIACNTQAMNVSRIKNKLSETAKALAALQLEAPIFSKVVSWRQAHEIPVSRPNDGAAAAKVSVKFLATSKVCFRVRG-TSVTTDWKTAKASSGVESGAWVTYPAQAAVTVTFKVRPETAAAAAVAPAGEHGGSSVDPVVDPSGVELNEADESVVLEWRGAGWFKGFVVYYVVEVA 410
            MS++ APS  +V++ K DPGL++LRE+ LT EE+  YASLAR W+P L+  EA+ EGWKL STLFGVK+WS+P    S+SSLVIC+GQIPL+ DVT E V+TQFV+ +NTSE LAQ+MR SD MSRETKILYQ+PC++ E IRI WGSFKAAGVAWARDFC +QHA  +TDP T ERLFCVV GSIERPEVPDMEKLCKRIR++ KTSG VFREPKDGGP+R TYVVNVNPNGWIP ++VNI C  QAMNVSR+KNKL ETAKALAAL++EAPIF K + WRQ HE P+ RP  G+AA+ VSVKF ATSKV FRV G T+ TTDW  A+AS+GV +G  VTYPA    T+TFK+RPE    AA       GG +V      S VEL EA  SVVLEW+GAGWF G V+Y++VEVA
Sbjct:   59 MSAEAAPSQEEVENGKQDPGLKFLREIQLTPEEDARYASLARGWIPDLVGFEASDEGWKLSSTLFGVKVWSRPNPDDSDSSLVICRGQIPLTQDVTFEMVKTQFVDVFNTSEILAQQMRASDPMSRETKILYQIPCEEGELIRISWGSFKAAGVAWARDFCFLQHAAASTDPATGERLFCVVSGSIERPEVPDMEKLCKRIRSTVKTSGLVFREPKDGGPMRATYVVNVNPNGWIPSKIVNIICTNQAMNVSRVKNKLHETAKALAALKIEAPIFPKAIGWRQTHEFPLRRPAPGSAASTVSVKFSATSKVTFRVVGATAATTDWAPAEASTGVGAGETVTYPADTPTTMTFKLRPE----AASGNGARRGGGAV----GASDVELEEAKSSVVLEWKGAGWFGGLVIYHLVEVA 465          
BLAST of mRNA_P-fluviatile_contig9.15353.1 vs. uniprot
Match: A0A7S2V7H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7H3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.670e-25
Identity = 87/272 (31.99%), Postives = 128/272 (47.06%), Query Frame = 0
Query:   29 LTKEEETHYASLARSWVPALIKCEAN---EGWKLVSTLFGVKIWSK---PTSNSSLVICKGQIPLSSDVTLEFVQTQFVNAYNTSETLAQEMRNSDVMSRETKIL------------YQVPCQDNE-------FIRIIWGSFKAAGVAWARDFCMMQHAYPTTDPDTDERLFCVVGGSIERPEVPDMEKLCKRIRASAKTSGFVFREPKDGGPLRLTYVVNVNPNGWIPHRVVNIACNTQAMNVSRIKNKLSETAKALAALQLEAPIFSKVV 275
            L++ E   Y  LA  W+  +IK +     EGWK   T  GV   ++   P   S  ++ +GQ  +   +   F   ++V+   TSE LA+EMR +D M     IL             +  C +N         ++I+W  F      W RDFC +Q      DP  +  +  VV GSIER EV   E     IR   K +G+VF+E    G L +TYVV V+  G IPH V N    +QA+NV+R ++++ E  KA   +++  P+ S  V
Sbjct:   13 LSQGEVKEYMQLANEWLHGIIKNDMGTDQEGWKYHWTRDGVTCSTREPAPDDPSPALLIRGQTRMRGTLQSVFEMLRWVD---TSEKLAEEMRITDPMCSGALILGCEYPNDNGEGKTEESCIENSESEDCSTILQILWFLFSLPQPLWDRDFCALQVITKCVDPIRNRNMVGVVCGSIERQEVGLPEHT---IRGEIKNTGYVFQESNVPGMLEVTYVVQVDTKGGIPHWVTNRINVSQALNVARTRDRMQEVQKACRIMKVRMPLESAEV 278          
BLAST of mRNA_P-fluviatile_contig9.15353.1 vs. uniprot
Match: L8H5Y9_ACACA (START domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5Y9_ACACA)

HSP 1 Score: 65.5 bits (158), Expect = 4.900e-8
Identity = 69/256 (26.95%), Postives = 111/256 (43.36%), Query Frame = 0
Query:    9 HGDVQHCKPDPGLQYLREMNLTKEEETHYASLARSWVPALIKCEANEGWKLVSTLFGVKIWSKPTSNSSLVIC---KGQIPLSSDVT-LEFVQTQFVNAYNTSETLAQEMRNSDVMSRETKILYQVPCQDNEFIRIIWGSFKAAGVAWARDFCMMQHAYPTTDPDTDERLFCVVGGSIERPEVPDMEKLCKRIRASAKTSGFVFREPKDGGPL------RLTYVVNVNPNGWIPHRVVNIACNTQAMNVSRIKNKL 254
            +  +    P+  L Y   +++T   E  Y S+ + +       +A+EGW       G+ I SK   +   V C   KG IP +++V  L  VQ      ++            D+    T  +   P      +R+    F A     +RDF ++       +  TD+ LF  V  SIER ++P  E     +R   K+SGFV + P D  P+       +TY+V +NP GWIP  VVN    +Q + ++ +KN +
Sbjct:   33 YNQIPKLSPEDSL-YKEYLDIT---EAGYESILKDY-------DADEGWVFWKEQDGITIHSKDHPDDP-VRCFRGKGIIPATAEVLRLHLVQVDLRKYWD------------DMFLGGTYKIELTPT-----VRVCNYKFSAPWPVASRDFVII-----AGEKITDDGLFVTVVNSIERDDIPVEEGF---VRGMLKSSGFVIK-PLDNDPVTGKPRCEITYLVQLNPMGWIPTIVVNTVNVSQPLCINTLKNAI 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JFK6_9PHAE3.860e-19066.51START domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2V7H3_9STRA5.670e-2531.99Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
L8H5Y9_ACACA4.900e-826.95START domain containing protein n=1 Tax=Acanthamoe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..267
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 34..259
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 34..259
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 51..254
IPR002913START domainPFAMPF01852STARTcoord: 128..253
e-value: 1.9E-7
score: 30.7
IPR002913START domainPROSITEPS50848STARTcoord: 154..237
score: 11.739
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 39..259
e-value: 2.8E-23
score: 84.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:3237561..3242297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15353.1mRNA_P-fluviatile_contig9.15353.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 3236306..3242297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15353.1 ID=prot_P-fluviatile_contig9.15353.1|Name=mRNA_P-fluviatile_contig9.15353.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=411bp
MSSDLAPSHGDVQHCKPDPGLQYLREMNLTKEEETHYASLARSWVPALIK
CEANEGWKLVSTLFGVKIWSKPTSNSSLVICKGQIPLSSDVTLEFVQTQF
VNAYNTSETLAQEMRNSDVMSRETKILYQVPCQDNEFIRIIWGSFKAAGV
AWARDFCMMQHAYPTTDPDTDERLFCVVGGSIERPEVPDMEKLCKRIRAS
AKTSGFVFREPKDGGPLRLTYVVNVNPNGWIPHRVVNIACNTQAMNVSRI
KNKLSETAKALAALQLEAPIFSKVVSWRQAHEIPVSRPNDGAAAAKVSVK
FLATSKVCFRVRGTSVTTDWKTAKASSGVESGAWVTYPAQAAVTVTFKVR
PETAAAAAVAPAGEHGGSSVDPVVDPSGVELNEADESVVLEWRGAGWFKG
FVVYYVVEVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002913START_lipid-bd_dom
IPR023393START-like_dom_sf