prot_P-fluviatile_contig9.15236.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig9.15236.1
Unique Name	prot_P-fluviatile_contig9.15236.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	980

Homology

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BLAST of mRNA_P-fluviatile_contig9.15236.1 vs. uniprot
Match: D7G8F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F3_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 3.140e-84
Identity = 174/317 (54.89%), Postives = 201/317 (63.41%), Query Frame = 0

Query:  428 MEEALRALNVPLVAVACAESEIPSALALWCGGAGDSGSSGTPVAAAPAAA-ATMKSLPTEGRVDIIIMDECYHPRQLSLSDKVKDALRGTRALYAVDSSCVYPVNTNGXXXXXXRVGAGE-----VLSPEEFRRAQDDCLPTALADLIPRPRLSLDESLQSQVLTGDAKRHVPILPGSFEHSMTSSSSSTKILCMDALREIAAHRFPGFGKPIPQQLVLSAEDLIATLGGGERVGEAALRQT--MAAASAASDQRSPA-GVARTDQGVGGSGRALPEEQFTSLAKEVEGLGFGGCLLHLLRLGSISSLFVAQALLGR 735
            ME  LRALNVPLVA++C + EIPSAL  WC G+ D G++     +  AA  AT K  P EG   I IMDECYHP QLSLS+KV+DALRGT ALYAVDSSCVYPVNT+G       VGA       VLSPEEFR+ QD CLP  LADL  RPRL L   LQ+Q   G  +R   +LP  F+    +++SS   +  D LREI+A RFPGFGKPIP +L  S +DLI+  GGGERVGE ALRQT  +A AS    QRS   GV  +    G  G   PE     L  E  GLGFGG LLH LRLGS+SSL V QA + R
Sbjct:    1 MEGTLRALNVPLVAISCVDGEIPSALTCWCRGSRDGGAADNSSESDTAATGATTKRSPMEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTRAGVGAATGGVTGVLSPEEFRQTQDGCLPAVLADLTIRPRLPLKPQLQNQTFVGGGER--AMLPREFQLGAGATASSAIAVDWDKLREISARRFPGFGKPIPSELASSDKDLISIFGGGERVGEMALRQTVHLAVASTPDGQRSAGTGVGSSSHTDGNGGLPPPEGICGRLESETAGLGFGGSLLHFLRLGSVSSLSVVQARIHR 315

[Close]

BLAST of mRNA_P-fluviatile_contig9.15236.1 vs. uniprot
Match: A0A6H5K9X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 4.600e-43
Identity = 90/161 (55.90%), Postives = 105/161 (65.22%), Query Frame = 0

Query:  486 EGRVDIIIMDECYHPRQLSLSDKVKDALRGTRALYAVDSSCVYPVNTNGXXXXXXRVGAGE-----VLSPEEFRRAQDDCLPTALADLIPRPRLSLDESLQSQVLTGDAKRHVPILPGSFEHSMTSSSSSTKILCMDALREIAAHRFPGFGKPIPQQLVLS 641
            EG   I IMDECYHP QLSLS+K +DALRGT ALYAVDSSCVYPVNT+G       V A       VLSPE+FR+ QD CLP  LADL  RPRL L   LQ Q+  G  +R   +LP  F+    +++SS   +  D LREI+A RFPGFGKPIP +L  S
Sbjct:    2 EGSAHITIMDECYHPTQLSLSEKARDALRGTGALYAVDSSCVYPVNTSGGGGARAGVAAAMGSVTGVLSPEDFRQTQDGCLPAVLADLTMRPRLPLKPQLQKQMFVGGGER--AMLPREFQLGAGATASSAIAVDWDKLREISARRFPGFGKPIPSELASS 160

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig9.15236.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig9.15236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8F3_ECTSI	3.140e-84	54.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K9X8_9PHAE	4.600e-43	55.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006050	DNA photolyase, N-terminal	PROSITE	PS51645	PHR_CRY_ALPHA_BETA	coord: 343..530 score: 10.781

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig9	contig	P-fluviatile_contig9:2122295..2132219 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig9.15236.1	mRNA_P-fluviatile_contig9.15236.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig9 2122265..2132359 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig9.15236.1 ID=prot_P-fluviatile_contig9.15236.1|Name=mRNA_P-fluviatile_contig9.15236.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=980bp
MVDATSMRGRKRARLFSPDPLPGFVFALDTSNTAFVVRSCARPDASAGQA
SPAASVGHDASRDLSPGSTSSAEKGSAGELSVASAVGGVEGVNPKGGGSD
DENLSAASISVTPSGTTVAAAAAAASVARAIPSLSAQPAAAPAAFPVGYC
QVTTSNDYRVTETITGHVPVGKADPYDPAAGNGKPIRDERVGDAIDNPSG
ARGKSGEVAVAKSLRTHETPANGDGGESTGAASLVISFLKRGSIASIPSP
PYQLHIPTPLPSCTGPESASPPKTPTSLASLITGVPDGSGGSTSGFRTPS
GGAESRLRSPPRGSSQFFNNEWAPSLKKRRRILHFKPNCPAGTRILYWVR
GNYRVRDNLGLSVAFWLSTQLRLPLQARGTNRGKAVIFVDPAVGSTVPAL
DSGAQHGAERHRELPFRTAVEISALCEMEEALRALNVPLVAVACAESEIP
SALALWCGGAGDSGSSGTPVAAAPAAAATMKSLPTEGRVDIIIMDECYHP
RQLSLSDKVKDALRGTRALYAVDSSCVYPVNTNGGGGGGGRVGAGEVLSP
EEFRRAQDDCLPTALADLIPRPRLSLDESLQSQVLTGDAKRHVPILPGSF
EHSMTSSSSSTKILCMDALREIAAHRFPGFGKPIPQQLVLSAEDLIATLG
GGERVGEAALRQTMAAASAASDQRSPAGVARTDQGVGGSGRALPEEQFTS
LAKEVEGLGFGGCLLHLLRLGSISSLFVAQALLGRPRDDGAGGSEQHPEV
FGWRKRLLDQVLEREYALYRSRSHHRERTSRVVATPASASTVALRGSPAT
SKGQALRGWMGFVPARVWKELKRVQRDARQQHRRSPAEIRSAGSTVPSSV
EDDIFSAIQVRLTTRARLHPSLAPYWARAVVKMMLIPAQALSLLVDLAEE
LCIGAGHAGDVIPDLLDSAFGVCREPSPTAAVATAGGLSLGQIETEAGLR
SALGGAEALALFLSRSPVQQQPPPSPRAS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006050	DNA_photolyase_N