prot_P-fluviatile_contig89.14989.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14989.1
Unique Nameprot_P-fluviatile_contig89.14989.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1154
Homology
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A6G6D7F3_ECTSI (DNA-directed RNA polymerase subunit beta n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7F3_ECTSI)

HSP 1 Score: 1972 bits (5108), Expect = 0.000e+0
Identity = 1013/1151 (88.01%), Postives = 1070/1151 (92.96%), Query Frame = 0
Query:    4 SIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKL-SLNKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLKPTGV 1153
            +I +NKKQKSPIILPDLSEVQRISFCWFLTEGLPEELT+CPSILN NSGIELIIYGQEYKIYYPGFA+LNALTKKGNYNLR+YVLMSLKKNEIIK  +VQ EDFS KERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIK++KI YEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVG SL++S+VYQTVQNF FLIKSL A+R  I+ KM S              DKN+  +K  +EAYNR+ILLT+FRVQELIN+RLLDKSVYDLGEVGRIKLNKKLDI LP +RRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKK++TDEKLTS+MFRIKKKK  ++ K S PKK          L + K   KETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLI+SLATHARIN YGFITTPFFRVYKGKV+Y   P++LTAEQEA YNVASGDVLLT+D+FFRT  VPVRSFNEFI VDA NVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKK IIGTGIEHQIAADSQVVLINL+DGI D VCSDRI IIDNK+LGSSK+YFLDKYRRSNQETIINQKPLIW+GEIV+PGQIIADGPGTE GELALGQNLTVAYMPW+GYNFEDAILVS RLVQDDLFTSIHIEKYEL+L+D+ DT+EEIT +IPNIE+EE+ NLD NGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNG+SGRVIEIQTASREKGD + SG+YEWV ISIAQIKKI+IGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASR+LINKALKKAAK+T K WLFNKFSPGK+LLTDGRTG+VFDN +LVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGH+IPEPGIPESFNVLLRELNALGLDMTTHEIGKL+NGEITSYKVNLLTL+KP  V
Sbjct:    3 NIIKNKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTNCPSILNQNSGIELIIYGQEYKIYYPGFALLNALTKKGNYNLRIYVLMSLKKNEIIKKEIVQPEDFSRKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKERKIFYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGLSLEESEVYQTVQNFNFLIKSLSAIRLAIFDKMTSKS------------DKNKVVDKANHEAYNRNILLTVFRVQELINQRLLDKSVYDLGEVGRIKLNKKLDIGLPLSRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKINTDEKLTSEMFRIKKKKKHAVTKNSTPKKXXXXXX--XXLGRKKKPQKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLIASLATHARINNYGFITTPFFRVYKGKVLYELGPVYLTAEQEATYNVASGDVLLTRDNFFRTKIVPVRSFNEFITVDAINVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVLINLIDGIIDSVCSDRITIIDNKHLGSSKMYFLDKYRRSNQETIINQKPLIWNGEIVEPGQIIADGPGTEGGELALGQNLTVAYMPWDGYNFEDAILVSDRLVQDDLFTSIHIEKYELELMDESDTIEEITTSIPNIEEEEIINLDMNGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGVSGRVIEIQTASREKGDNLGSGIYEWVCISIAQIKKIRIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRILINKALKKAAKETDKGWLFNKFSPGKVLLTDGRTGDVFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHNIPEPGIPESFNVLLRELNALGLDMTTHEIGKLNNGEITSYKVNLLTLMKPKVV 1139          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A1I9LV95_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LV95_9PHAE)

HSP 1 Score: 1915 bits (4962), Expect = 0.000e+0
Identity = 977/1151 (84.88%), Postives = 1052/1151 (91.40%), Query Frame = 0
Query:    4 SIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSL-NKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLKPTGV 1153
            +I EN+K+KSPI+LPDLSEVQRISFCWFLTEGL EEL +  SILN NSGIELIIY QEYKIYYPGFAILNALTKKGNYNLR+YVLMSLKKNEIIKN ++Q ED+S+KERV FGEIPLLTEKGTFIFNGCERVIISQI+RSPGVYYKQIIK+KKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSL++S+VYQTVQNFEFLIKS  A+R  ++ KM+S   K+K Q+               NE YNR+ILLT+FR+QELI ERLLDKS+YDLGEVGRIKLN KLDI LP T RTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVR+VGELLQLQVR+ALGRIKKK++TDEKLTSDMFR+KK K  + NKKS PKK  +  N  +  +K     K+TLMPNELLNSK+LTSVIREFFGLSPLSQYFDEVNAL+QLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHA+IN YGFITTP F VYKGKVIY   PIHLTAE+EAKYNVAS DVL+T+D++FR   VPVRSFNEFI V+  NVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKK IIGTGIEHQIAADSQVVLINLLDGI D V S+RI I+DN+NLGSSK+YFLDKYRRSNQETIINQKPLIW+GEIV+PGQIIADGPGTE GELALGQNLTVAYMPW+GYNFEDAILVS RLVQDDLFTSIHIEKY+LQ++DD DT++EIT+AIPNIE+EE+ NLD NGIIKKGTFVNGGDILVGKITP+LEEDELPES+LLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGD + SGVYEWV ISIAQIKKI+IGDKLSGRHGNKGVISKIIPT DMPFLPDGTI+DVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRF+V+PFDEMY PNASR+LINKALKKAA++T KSWLFNKFSPGKILLTDGR G +FDN +LVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGRHEVFTAIIKG +IPEP +PESFNVLLRELNALGLDMTTHEI  LDN EITSYKVNL  L+KP  V
Sbjct:    3 NIIENRKKKSPILLPDLSEVQRISFCWFLTEGLSEELANYSSILNQNSGIELIIYSQEYKIYYPGFAILNALTKKGNYNLRIYVLMSLKKNEIIKNDIIQPEDYSLKERVLFGEIPLLTEKGTFIFNGCERVIISQIVRSPGVYYKQIIKEKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLEESEVYQTVQNFEFLIKSFAAIRVAVFDKMISKVDKNKVQN---------------NEYYNRNILLTVFRIQELIKERLLDKSMYDLGEVGRIKLNTKLDIGLPLTTRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRAVGELLQLQVRIALGRIKKKINTDEKLTSDMFRLKKNKKGVENKKSNPKKNKSTKNSLISRIKT--IPKDTLMPNELLNSKILTSVIREFFGLSPLSQYFDEVNALSQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHAKINNYGFITTPLFPVYKGKVIYDIGPIHLTAEEEAKYNVASKDVLVTKDNYFRDKIVPVRSFNEFITVEDINVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVLINLLDGIIDSVFSNRITIVDNQNLGSSKIYFLDKYRRSNQETIINQKPLIWNGEIVEPGQIIADGPGTEGGELALGQNLTVAYMPWDGYNFEDAILVSDRLVQDDLFTSIHIEKYDLQVLDDSDTIDEITKAIPNIEEEEIRNLDINGIIKKGTFVNGGDILVGKITPVLEEDELPESRLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDNLGSGVYEWVCISIAQIKKIRIGDKLSGRHGNKGVISKIIPTYDMPFLPDGTIIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFRVLPFDEMYTPNASRILINKALKKAAQQTNKSWLFNKFSPGKILLTDGRNGNIFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTLKSDDINGRHEVFTAIIKGQNIPEPCVPESFNVLLRELNALGLDMTTHEISNLDNLEITSYKVNLFNLIKPNVV 1136          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A0R6M4L3_UNDPI (DNA-directed RNA polymerase subunit beta n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6M4L3_UNDPI)

HSP 1 Score: 1845 bits (4778), Expect = 0.000e+0
Identity = 933/1143 (81.63%), Postives = 1031/1143 (90.20%), Query Frame = 0
Query:    7 ENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            EN+KQK PIILPDLSEVQRISFCWFLTEGLPEELT+CPSILN  SGIELIIYGQEYKIYYP FAILNAL KKGNYNLRVYVLMSLKKNE +KNG VQ EDFS KERVFFGEIPL+TEKGTFIFNGCERVI+SQIIRSPG+YYK+I K+KK+ YEGTIISK+GSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSL++ ++YQTVQN+EFL KS++++ SVIY KM                       K    +YN+S+L+++FR++ELINERLL+KS+YDLGEVGRIKLNKKL I+LP   R LTSLDILK IDKLIHIS +NEKLDDIDNLENRRVRSVGELLQLQVRVAL R++KK++TDEKLT DMFR+KK +      S  KK+ +I  K  K  ++ I  +ETLMPN+L+N+KVLTSVIREFFGLSPLSQYFDE+NALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLI+SLATHA+IN YGFITTPFFRVYKGKV+    PI+LTAEQE  Y VASGDVLLT+D FF+T  VPVR +NEFIIVD+ +V+F+AVSPIQI+A+GASLIPFLEHDDANRALMGSNMQRQAVPLLYPKK IIGTGIEHQIAADSQVV+INLL+G+ D V +DRI I+DNKN+GSSK++FLDKYRRSNQETIINQKPLIW GEIVKPGQIIADGPGT+ GELALGQNLTVAYMPWEGYN+EDAILVS+RLVQ+DLFTSIHIEKYELQL+DD  ++EEIT +IPNI+ + + NLD NGIIKKGTFVN GDILVGKITPI+E++ELPESKLLRAIFNI+SPEPED+SLRVPNGISGRVIEIQTASREKGD + SGVYEWV ISIAQIKKI+IGDK+SGRHGNKGVISKIIP  DMPFLPDGT+VDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKV+PFDEMY+PNASR+LINK LKKAAKKT K WLFNK SPGK+LLTDGRTGE+FDN +LVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVF AIIKGH IPEPG+PESF VLLRELNALGLD+TTH+IGKLDNGE+ SYKVNLLTL+K
Sbjct:    6 ENRKQKFPIILPDLSEVQRISFCWFLTEGLPEELTNCPSILNKRSGIELIIYGQEYKIYYPSFAILNALKKKGNYNLRVYVLMSLKKNETLKNGTVQSEDFSSKERVFFGEIPLMTEKGTFIFNGCERVIVSQIIRSPGIYYKRIQKEKKVFYEGTIISKHGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLEEHEIYQTVQNYEFLRKSVKSLNSVIYDKMF---------------------HKATFGSYNKSMLMSVFRIRELINERLLNKSLYDLGEVGRIKLNKKLGISLPLNIRILTSLDILKAIDKLIHISSYNEKLDDIDNLENRRVRSVGELLQLQVRVALNRLRKKITTDEKLTPDMFRVKKTRRG----STDKKSQDIKIKGNKNFEEDIPLEETLMPNDLVNAKVLTSVIREFFGLSPLSQYFDEINALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLIASLATHAKINNYGFITTPFFRVYKGKVLRELGPIYLTAEQETIYRVASGDVLLTKDEFFQTTTVPVRFYNEFIIVDSVSVDFIAVSPIQIIAIGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVIINLLNGVVDSVSADRIIILDNKNIGSSKVFFLDKYRRSNQETIINQKPLIWTGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILVSERLVQEDLFTSIHIEKYELQLVDDSASIEEITTSIPNIDTDAICNLDTNGIIKKGTFVNPGDILVGKITPIVEDEELPESKLLRAIFNIKSPEPEDTSLRVPNGISGRVIEIQTASREKGDNLASGVYEWVCISIAQIKKIRIGDKISGRHGNKGVISKIIPIHDMPFLPDGTVVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVVPFDEMYRPNASRILINKTLKKAAKKTNKPWLFNKSSPGKVLLTDGRTGEIFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIIKGHPIPEPGVPESFKVLLRELNALGLDITTHQIGKLDNGEMASYKVNLLTLVK 1123          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A8F0F9J7_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J7_9PHAE)

HSP 1 Score: 1805 bits (4675), Expect = 0.000e+0
Identity = 918/1147 (80.03%), Postives = 1027/1147 (89.54%), Query Frame = 0
Query:    4 SIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKK-KKLSLNKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            +I ENKK+K PIILPDLSEVQRISFCWFL+EGLPEELTSCPSILN  SGIELIIYGQEYKI+YP FAIL++L KKGNYNLR+YVLMSL+KNE + +GV+Q ED S KERV FGEIPL+TEKGTFIFNGCERVI+SQIIRSPG+YYK++ K+KK+SYEGTIISKYGSWLTFELEYNLIW KFDKQYKIPINWFLVGFSL++ ++YQT+QN+EFL KS+E++ S+I  KM  +                        E YN+++LL +FRV+ELI ERL +KS+YDLGEVGRIKLNKKL I+LP   RTLTSLDILK IDKLI+IS  NEKLDDIDNLENRRVRSVGEL+QLQVRVAL R++KK++TDEKLT +MFR+KK KK  +NKK K  KT   T+K  K+V+++IFSK+TLMPN L+ SKVLTSVIREFFGLSPLSQYFDE+NALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLI+SLATHARIN YGFI TPF RVYKGKV+  S  ++LT EQEAKY VA+GDVLLT D+FF+ + VPVR  NEFI+ +A +V+FLA+SPIQILA+GASLIPFLEH+DANRALMGSNMQRQAVPLLYPKK IIGTG+EHQIAADSQ+V+INLLDGI D V S+RI IIDNKN G+SK+YFLDKYRRSNQET+INQKP+IW GEIVKPGQIIADGPGT+ GELALGQNLTVAYMPWEGYN+EDAIL+S+RLVQ+DLFTSIHIEKYEL+L+   DTVEEIT  IPNIE + + NLD NGIIKKGTFVN GDILVG+ITPI+EE+ELPESKLLRAIFNIESPEPED+SLRVPNGISGRVIEIQTASREKGD++ SGVYEWV IS+AQIKKI+IGDKLSGRHGNKGVISKIIPT DMP+LPDG IVDVILNPLGVPSRMNVGQ+FECLLGFAGDYLNRRFKVIPFDEMY+P+ASR+LINKALKKAAKKT KSWLFNK SPGKILLTDGRTG+VFDN ILVGK YILKLIHLVDKKMHARSTG+YSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGR+EVF+AII+G  IPEPGIPESF VLLRELNALGLD+TTH +GKLDNGE+ S KVNLL L+K
Sbjct:    3 NIIENKKKKPPIILPDLSEVQRISFCWFLSEGLPEELTSCPSILNKRSGIELIIYGQEYKIFYPSFAILSSLHKKGNYNLRIYVLMSLRKNETLVDGVLQREDSSKKERVLFGEIPLITEKGTFIFNGCERVIVSQIIRSPGLYYKRVKKEKKVSYEGTIISKYGSWLTFELEYNLIWAKFDKQYKIPINWFLVGFSLEEKEIYQTIQNYEFLKKSVESLHSIICQKMFDDGDL---------------------EGYNQNMLLAVFRVRELIYERLFNKSLYDLGEVGRIKLNKKLGISLPLNIRTLTSLDILKTIDKLIYISSFNEKLDDIDNLENRRVRSVGELMQLQVRVALNRLRKKITTDEKLTPEMFRVKKIKKSVVNKKPKAGKTK--TSKANKIVEEEIFSKQTLMPNHLVKSKVLTSVIREFFGLSPLSQYFDEINALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLIASLATHARINYYGFIITPFIRVYKGKVMKDSGLVYLTTEQEAKYKVAAGDVLLTNDNFFQKSLVPVRYQNEFIVTNADDVDFLAISPIQILAIGASLIPFLEHNDANRALMGSNMQRQAVPLLYPKKPIIGTGLEHQIAADSQIVVINLLDGIVDSVSSERIIIIDNKNFGNSKIYFLDKYRRSNQETVINQKPIIWTGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILISERLVQEDLFTSIHIEKYELRLVYHSDTVEEITTQIPNIEADAIFNLDTNGIIKKGTFVNAGDILVGRITPIVEEEELPESKLLRAIFNIESPEPEDTSLRVPNGISGRVIEIQTASREKGDSLASGVYEWVCISLAQIKKIRIGDKLSGRHGNKGVISKIIPTQDMPYLPDGRIVDVILNPLGVPSRMNVGQLFECLLGFAGDYLNRRFKVIPFDEMYRPDASRILINKALKKAAKKTKKSWLFNKSSPGKILLTDGRTGQVFDNSILVGKSYILKLIHLVDKKMHARSTGTYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRNEVFSAIIQGFPIPEPGIPESFKVLLRELNALGLDITTHHLGKLDNGEMVSSKVNLLALVK 1126          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A8F0FB00_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB00_9PHAE)

HSP 1 Score: 1738 bits (4501), Expect = 0.000e+0
Identity = 882/1167 (75.58%), Postives = 1004/1167 (86.03%), Query Frame = 0
Query:    1 MKHSIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITNKKLKLVKDKIFSKET------------------LMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            MK+++E  KKQ+ PIILPDLSE+QRISFCWFLTEGLP+EL++ PSILN  SGIELIIYGQEYKIYYP F ILNA  KKGNYNLRVYVLMSLKKNE +  G VQ+EDFS KERVFFGEIPL+TEKGTFIFNGCERVI+SQIIRSPG+YYK+  K+KK+ YE T ISKYGSWLTFELEYNLIWVKFDKQYKIPINWF VG SL++ ++YQTVQN+EFL +S++++  V+Y KM                       K    +YN+S+L  +FRV+ELIN R+L+K+ YDLGEVGRIKLNKKL +NLP   R LTSLD+L+ +DKLIHISF+NEKLDDIDNLENRRVRSVGELLQLQ+RVAL R++K + T+E LT+D+FR+KKK            T  I+NKK K                             LMP+ L+NSKVLTSVIREFFGLSPLSQYFDE+NALAQLTHKRRISSLGPGGLNS+HVSFAARDIHPTQYGRLCPIETPEGQKAGLI+SLATHA+IN+YGFITTPF RVYKGKV+  ++PI+LTAE+EA YNVASGDVLLT+D+FF++  VPVR   EFIIVDA++VNF+AVSPIQI+A GASLIPFLEHDDANRALMGSNMQRQAVPLLYP+K IIGTGIEHQIAADSQVVLINLL+GI   V +DRI + DNKNLGSSK+YFLDKYRRSNQETIINQK LIW GEIVKPGQIIADGPGT+ GELALGQNLTVAYMPWEGYN+EDAILVS++LVQ+DL TSIHIE+YELQ+ID+   +EEIT  IP+ E E L +LD NGI+KKG+FVN GDIL+GKITPI E DELPESKLLRAIFNI+SPEPED+SLRVPNGISGRVIEIQTASR+KGD++P GV +W+ ISIAQIKKI+IGDK+SGRHGNKGVISKIIPT+DMPFLPDGTIVDVILNPLGVPSRMNVGQ+FECLLGFAGDYLNRRFKV+PFDEMY+P ASR+LINK L++A+KKT KSWLFN  SPGK++LTDGRTGE+FDN ++VGKPYILKLIHLVDKKMHARSTG YSLVTQQPLGGKS+HGGQRFGEMEVWALEAFGVAYTLQELLT+KSDDI+GRHEVF AII+G  IP+PG+PESF VLLRELN+LGLD+TT++IGKLDNGEI  YKVNL+TL+K
Sbjct:    1 MKNTLE-TKKQQFPIILPDLSELQRISFCWFLTEGLPQELSNYPSILNKKSGIELIIYGQEYKIYYPKFTILNAFKKKGNYNLRVYVLMSLKKNETVDKGKVQIEDFSPKERVFFGEIPLMTEKGTFIFNGCERVIVSQIIRSPGIYYKRTQKEKKVFYEATFISKYGSWLTFELEYNLIWVKFDKQYKIPINWFFVGMSLEEHEIYQTVQNYEFLRQSMKSLNLVVYDKMF---------------------RKTTFGSYNKSLLAAVFRVRELINNRILNKNSYDLGEVGRIKLNKKLGLNLPLNVRLLTSLDMLRALDKLIHISFYNEKLDDIDNLENRRVRSVGELLQLQIRVALTRLQKNIITNENLTADIFRVKKK------------TKRISNKKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMPSILVNSKVLTSVIREFFGLSPLSQYFDEINALAQLTHKRRISSLGPGGLNSDHVSFAARDIHPTQYGRLCPIETPEGQKAGLIASLATHAKINEYGFITTPFLRVYKGKVMTKAAPIYLTAEKEALYNVASGDVLLTKDNFFQSKSVPVRFCGEFIIVDAASVNFIAVSPIQIIAAGASLIPFLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGIEHQIAADSQVVLINLLEGIVHSVSADRIIVFDNKNLGSSKVYFLDKYRRSNQETIINQKALIWAGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILVSEKLVQEDLLTSIHIERYELQIIDNNIGLEEITAKIPHTEVEALAHLDENGIVKKGSFVNAGDILIGKITPIKEADELPESKLLRAIFNIKSPEPEDTSLRVPNGISGRVIEIQTASRDKGDSLPIGVDQWICISIAQIKKIRIGDKISGRHGNKGVISKIIPTEDMPFLPDGTIVDVILNPLGVPSRMNVGQLFECLLGFAGDYLNRRFKVLPFDEMYRPEASRILINKKLREASKKTNKSWLFNSSSPGKVMLTDGRTGELFDNSVMVGKPYILKLIHLVDKKMHARSTGPYSLVTQQPLGGKSRHGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDISGRHEVFNAIIRGRPIPKPGVPESFKVLLRELNSLGLDITTYQIGKLDNGEIAPYKVNLMTLIK 1133          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A2R4QPV0_9PHAE (DNA-directed RNA polymerase subunit beta n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPV0_9PHAE)

HSP 1 Score: 1735 bits (4493), Expect = 0.000e+0
Identity = 875/1144 (76.49%), Postives = 999/1144 (87.33%), Query Frame = 0
Query:    7 ENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKK-KKLSLNKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            EN KQK P++LPDLSEVQR+SFCWFLTEG+PEE T  PSILN  SGIELIIYGQEYKI+YP F IL+AL KKGN+NLR+YVLMSLKK E+IKNG +Q EDFS KERVFFGEIPL+TEKGTF+FNGCERVI+SQIIRSPG+YY+++ K+KK+ YEGTIISK+GSWLTFELEYNLIWVK DKQYKIPINWFLVGF L+++++YQTVQN+EFL KS++++ S +Y KM                      +K   E+YN+SIL+ I RV+ELINER+L+KS YDLGEVGRIKLNKKL INLP   R LT LD+LK IDKLI ISF+NEKLDDIDNLENRRVR VGELLQLQ+RVAL R+KK ++T EKLTSDMFR+K  +K  L+K+ +       TN   K+  ++ +++ TLMP        LTS IREFFGLSPLSQYFDE+NALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQ+AGLISSLATHA+IN+YGFITTPFFRVYKGKV+  S+PI+LTAE+E  Y VAS DVLLT+D+FF T  VPVR +NEFI+V+++ V+F+AVSPIQI+A GASLIPFLEHDDANRALMGSNMQRQAVPLLYPKK IIGTGIEHQIA+DSQVV+INLL+G  ++  SD+I I+DN+N+G+SK+YFLDKYRRSNQETIINQKPLIW GEIVKPGQIIADGPGT+ GELALGQNL VAYMPWEGYN+EDAILVS++L+ +DLFTSIHIE+YELQL+D+   +EEIT  IP+IE + + NLD NGIIKKGTFV  GDILVGKITPI+EE+ELPESKLLRAIFNI+SPEPED+SLRVPNG+SGRVIE+QTASR+KGD + SGVYEWV ISIAQ KKIKIGDKLSGRHGNKGVISK+IPT DMPFLPDGTI+DVILNPLGVPSRMNVGQIFECLLGFAGDYLN+RFKV+PFDEMY+ NASR+L+NK LKKAA KT K+WLFNK SPGKI L DGRTGE+F+NP+LVGKPYILKLIHLVDKKMHARSTGSYSL+TQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVF AII G  IPEPG+PESF VLLRELNALGLD+TTH++ K ++ EI S KVNLLTL+K
Sbjct:    6 ENIKQKFPLVLPDLSEVQRLSFCWFLTEGIPEEFTDYPSILNKKSGIELIIYGQEYKIHYPNFNILSALQKKGNFNLRIYVLMSLKKREVIKNGTLQPEDFSFKERVFFGEIPLMTEKGTFLFNGCERVIVSQIIRSPGLYYRRLQKEKKVFYEGTIISKHGSWLTFELEYNLIWVKIDKQYKIPINWFLVGFFLEENEIYQTVQNYEFLRKSVQSLNSAVYEKMF---------------------QKANFESYNKSILIVILRVRELINERILNKSFYDLGEVGRIKLNKKLGINLPLNIRILTPLDVLKTIDKLISISFYNEKLDDIDNLENRRVRCVGELLQLQIRVALNRLKKNITTSEKLTSDMFRVKNIRKTILSKQIES------TN---KIQTEEKYTENTLMPXXXXXXXXLTSTIREFFGLSPLSQYFDEINALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQRAGLISSLATHAKINQYGFITTPFFRVYKGKVLKESTPIYLTAEKENIYRVASADVLLTKDYFFETQYVPVRFYNEFIVVNSTTVDFIAVSPIQIIAAGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIASDSQVVIINLLNGTVNYASSDQIIILDNENVGNSKVYFLDKYRRSNQETIINQKPLIWAGEIVKPGQIIADGPGTDGGELALGQNLLVAYMPWEGYNYEDAILVSEKLIHNDLFTSIHIERYELQLMDNNTNIEEITITIPSIEAKAICNLDKNGIIKKGTFVKSGDILVGKITPIVEEEELPESKLLRAIFNIKSPEPEDTSLRVPNGVSGRVIEVQTASRDKGDNLESGVYEWVCISIAQTKKIKIGDKLSGRHGNKGVISKLIPTCDMPFLPDGTIIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNQRFKVLPFDEMYRSNASRILVNKTLKKAAYKTNKTWLFNKSSPGKIPLIDGRTGELFNNPVLVGKPYILKLIHLVDKKMHARSTGSYSLITQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIINGRPIPEPGVPESFKVLLRELNALGLDITTHQLRKSNSEEIKSSKVNLLTLIK 1119          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A141BSD1_9PHAE (DNA-directed RNA polymerase subunit beta n=16 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD1_9PHAE)

HSP 1 Score: 1732 bits (4487), Expect = 0.000e+0
Identity = 878/1148 (76.48%), Postives = 995/1148 (86.67%), Query Frame = 0
Query:    7 ENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITN-KKLKLV----KDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            ENK+Q   + LPDLSEVQR+SFCW LTEG+ EEL + PSI+N  SGIEL+IYGQEYKI+YP F IL+AL K+GN+NLR+YVLMSLKK E+IKNG++Q EDFS KERVFFGEIPL+TEKGTFIFNGCERVI+SQIIRSPG+YY++I K+KK+ YEGTIISKYGSWLTFELEYNLIWVK DKQYKIPINWFLVGF L++ ++YQTVQN+EFL KS+ ++ SV+Y KM                      +K   E+YN+SILL IFRV+ELI E++L+K+ YDLGEVGRIKLNKKL INLP   RT+TSLDILKVIDKLI ISF+NE+LDDIDNLENRRVRSVGELLQLQ+RVAL R+KK ++  EKLTS+MFR+KK               N TN K++K +    K+K   + TLMP+ L+ SK+LT+ IREFFGLSPLSQYFDE+NALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQ+AGLISSLATHA+INKYGFITTPFF VYKGKV+  S PI+LTAE+E  Y VAS DVLLT+D+FF+   VPVR +NEFIIV+ +NV+F+AVSPIQI+A GASLIPFLEH+DANRALMGSNMQRQAVPLLYPKK IIGTGIEHQIA DS VV+INLL+GI D V SD+I I+D +N+GSSK+YFLDKYRRSNQETIINQKPL+W GEIVKPGQ IADGPGT+ GELALGQNL VAYMPWEGYN+EDAILVS+RL+  DLFTSIHIE+YELQL+D+   VEEIT+++PNIE E + NLD NGIIKKGTFV GGDILVGKITP++EE+ELPESKLLRAIFNI+SPEPED+SLRVP GISGRVIE+QTASREKGD + SGVYEW+ I IAQ KKIKIGDKLSGRHGNKGVISK+IPT DMPFLPDGT +DVILNPLGVPSRMNVGQIFECLLGFAGDYLN RFKV+PFDEMY+ NASR+ INKALK AA KT KSW+FNK  PGK++L DGRTGE+F+NPILVGKPYILKLIHLVDKKMHARSTGSYSL+TQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVF AII G  IPEPGIPESF VLLRELNALGLD+TTH++ K ++GEI S+ VNLLTLLK
Sbjct:    6 ENKRQTFAMRLPDLSEVQRVSFCWLLTEGIAEELINYPSIMNKKSGIELLIYGQEYKIHYPNFNILSALQKRGNFNLRIYVLMSLKKKEMIKNGLLQQEDFSKKERVFFGEIPLMTEKGTFIFNGCERVIVSQIIRSPGLYYRRIQKEKKVFYEGTIISKYGSWLTFELEYNLIWVKVDKQYKIPINWFLVGFFLEEEEIYQTVQNYEFLSKSVRSLNSVMYEKMF---------------------QKTNFESYNKSILLVIFRVRELITEKILNKNFYDLGEVGRIKLNKKLAINLPINIRTITSLDILKVIDKLISISFYNERLDDIDNLENRRVRSVGELLQLQIRVALNRLKKNITASEKLTSEMFRVKK-------------IQNQTNTKQMKSIQYLRKEKNSEEITLMPSALVTSKILTASIREFFGLSPLSQYFDEINALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQRAGLISSLATHAQINKYGFITTPFFMVYKGKVLKDSPPIYLTAEKEKMYKVASADVLLTKDYFFQDTSVPVRFYNEFIIVEGTNVDFIAVSPIQIIAAGASLIPFLEHNDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAIDSLVVIINLLNGIVDSVSSDQIIILDIENIGSSKIYFLDKYRRSNQETIINQKPLVWPGEIVKPGQTIADGPGTDGGELALGQNLMVAYMPWEGYNYEDAILVSERLLHHDLFTSIHIERYELQLMDNSMKVEEITKSVPNIETEAISNLDINGIIKKGTFVKGGDILVGKITPVMEEEELPESKLLRAIFNIKSPEPEDTSLRVPKGISGRVIEVQTASREKGDNLESGVYEWIGILIAQTKKIKIGDKLSGRHGNKGVISKLIPTYDMPFLPDGTTIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNHRFKVLPFDEMYRKNASRIFINKALKSAAYKTNKSWIFNKSFPGKVILKDGRTGEIFNNPILVGKPYILKLIHLVDKKMHARSTGSYSLITQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIINGRPIPEPGIPESFKVLLRELNALGLDITTHQLRKSESGEIKSFNVNLLTLLK 1119          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A8F0F779_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F779_9PHAE)

HSP 1 Score: 1598 bits (4138), Expect = 0.000e+0
Identity = 794/1146 (69.28%), Postives = 949/1146 (82.81%), Query Frame = 0
Query:    4 SIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            +I +N +   PIILPDLSE+QRISFCWFLTEGLP+ELT  PS+LN  +GIEL+IYGQEY+IYYP F++LNAL K+GNYNLRVYVLM++KK+E  KN + Q+   S K+RVFFGEIPL+T+KGTFIFNGCER+IISQIIRSPGVYYK   KD K  Y+GTIIS YGSWLTFELEYNLIWVK D+Q+KIPINWFLVG  L++ ++ + +QN++FL +S+ ++  VI+++M    +  +                     Y+R++LL +F V+EL+  R+ +KS YDLGE+GRIKLNKKL +NLP   + LTSLDILK ID LI ISFH E++DDID+LENRRVR VGELLQLQ+R+AL R KK ++T EKL  D+ R  K                                  +  N L+NSK+LTSV+REFFGLSPLSQYFDE NALAQLTHKRRISSLGPGGLN EHVSF ARDIHPTQYGRLCPIETPEGQ+AGL++SLATHA+IN +GFI TPF+RVY G+V+   +PI+LT+E+EA Y VAS DV +  D+FF+ + VPVR ++EF++VDAS+VNF+AVSPIQILA+G+SLIPFLEHDDANRALMGSNMQRQAVPLLYP+K IIGTG+EH+IAADS+VVLIN  +GI ++V +DRI I++N N+GSSK+YFLDKYRRSNQETIINQKPLIW G+IVK GQI+ADGP T+EGELALGQNL VAYMPWEGYN+EDAIL+S+RLV  DLFTSIHIEKY+LQ+ +    ++E+T  I ++E E L NLD NGII+KGTFV GGDILVGKITPI E +ELPESKLLRA+FNI+SP+P+D+SLRVP+G+SGRVIEIQTASR KGD +  GV  WV +SIAQIKKI+IGDK+SGRHGNKGVISKIIP +DMPFLPDGT++DVILNPLGVPSRMNVGQIFECLLGFAGDYLN RFKVIPFDEMY+P+ASRMLIN+ L+KA+ +T K+WL+   SPGKILLTDGRTG++FDNPI VGKPY+LKLIHLVDKK+HARSTG YSLVTQQPL GK+++GGQRFGEMEVWALEAFGVAYTLQELLT+KSDDINGRHEVF AIIKGH IP+PGIPESF VLL ELNALGLD+TT+++GKL+NGEI SY VNL+  ++
Sbjct:    3 NISQNVRSSVPIILPDLSEIQRISFCWFLTEGLPQELTKHPSLLNEKTGIELLIYGQEYRIYYPSFSVLNALKKRGNYNLRVYVLMAVKKHETAKNKIKQVNYSSPKQRVFFGEIPLMTDKGTFIFNGCERIIISQIIRSPGVYYKCTKKDNKRFYQGTIISNYGSWLTFELEYNLIWVKLDQQFKIPINWFLVGLGLEEYEISEALQNYDFLQESVNSLNIVIHNQMFKGAEYGR---------------------YSRAMLLAVFNVRELLRIRIFNKSSYDLGEIGRIKLNKKLGLNLPLNIKVLTSLDILKTIDNLIDISFHGERVDDIDDLENRRVRGVGELLQLQLRLALTRFKKNLTTSEKLVDDLLRSTK----------------------------------IKKNSLVNSKILTSVVREFFGLSPLSQYFDETNALAQLTHKRRISSLGPGGLNGEHVSFVARDIHPTQYGRLCPIETPEGQRAGLVASLATHAQINNHGFIRTPFYRVYNGRVLKNLAPIYLTSEKEATYKVASADVPIGSDNFFKNSFVPVRHYDEFMLVDASSVNFIAVSPIQILAIGSSLIPFLEHDDANRALMGSNMQRQAVPLLYPQKPIIGTGLEHKIAADSRVVLINAFEGIVNFVSADRIIILNNGNIGSSKIYFLDKYRRSNQETIINQKPLIWPGQIVKSGQILADGPATDEGELALGQNLRVAYMPWEGYNYEDAILISERLVSADLFTSIHIEKYDLQISEANSAIDELTNKIADVEPEVLVNLDVNGIIRKGTFVKGGDILVGKITPIKESEELPESKLLRAVFNIKSPDPKDTSLRVPHGVSGRVIEIQTASRAKGDNLSLGVEHWVCVSIAQIKKIRIGDKMSGRHGNKGVISKIIPREDMPFLPDGTLIDVILNPLGVPSRMNVGQIFECLLGFAGDYLNHRFKVIPFDEMYEPDASRMLINQTLEKASLQTNKTWLYTSSSPGKILLTDGRTGDIFDNPITVGKPYLLKLIHLVDKKIHARSTGPYSLVTQQPLKGKARNGGQRFGEMEVWALEAFGVAYTLQELLTVKSDDINGRHEVFNAIIKGHPIPKPGIPESFKVLLLELNALGLDITTNQLGKLENGEIDSYHVNLMAYVR 1093          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A2I4Q2B1_9PHAE (DNA-directed RNA polymerase subunit beta n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2B1_9PHAE)

HSP 1 Score: 1518 bits (3930), Expect = 0.000e+0
Identity = 759/1149 (66.06%), Postives = 939/1149 (81.72%), Query Frame = 0
Query:    4 SIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNNSGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSL---KKNEIIKNGVVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQIIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFSLDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKNRDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITNKKLKL-VKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLL 1148
            S+ ++ +QK  I LPDLSE+QR+SFCWFLTEGLP+EL + P ILN  SGI+L++YG EYKIYYP F++LNAL K  +YNL++YVLM+L   K N+ I   + Q+ED   KE VF GE+PL+T KGTFIFNGCER+I+SQI+RSPGVYYK + KDKK  YE TIIS YGSWL+FELEYNLIWVK DKQYKIPINWFLV   L +++++++++N++FL KS++++  +IY KM    +                        YN S+L ++FR++ELI  RL + S YDLGE+GR KLNK+L INLP   + LTSLDILK ID LI +SF+NEKLD+ID+LENRRVRS+GEL+Q QVR+AL R+ K  S +EKL S++F +KK K   +KKSK     NI  +K K  +KD +  ++ L P+ L++SK+LTS+IREFFGLSPLSQYFDE+N LAQLTHKRRISSLGPGGLNS+HVSF ARDIHPTQYGRLCPIETPEGQ+AGLI+SLATHA+I++YGFI TPFF+VYKG+V+    PI+LTAE+EA Y VA+ D+ LT D+FF+ + +PVR  NEFI+ D+ NVNF+A+SPIQILA GASLIPFLEH+DANRALMGSNMQRQA+PLL  +K I+GTGIE QIA DS V ++NL +G+ + V +DRI ++ N     +K+YFLDK+RRSNQETIINQ+P++W G++VK GQIIADGP TEEGELALGQNL VAY+PWEGYN+EDAI+VS+RL+ DDLF+S+HIEKYEL L+++   +EE+TR IP +++E L  LD NG++KKGTFV GGDILVGKITPI+  +ELPESKLLRA+F IESPEP+D+SL+VPN +SGRVI+I  ASRE GDT+ +GVY+   ISIAQIKKIKIGDK+SGRHGNKGVISKI+P +D+PFLPDG  +DV+LNPLGVPSRMNVGQIFECLLGFAGDYLN+R+KV+PFDEMY   ASR+L+NK L KA+K T   WLFN  SPGKILLTDGRTGE FDNPILVGKPY+LKL+HLVDKKMHARSTG YSLVTQQPL GKS +GGQRFGEMEVWAL+A+GVAYTLQELLT+KSDD+ GR+EV+ AI+KGH IP+P IPESF VLLRELN+LGLD+T +++ KL+N E+ +  +NL++LL
Sbjct:    3 SLRQSLEQKLTINLPDLSEIQRLSFCWFLTEGLPQELANFPLILNKKSGIQLVLYGHEYKIYYPKFSVLNALKKGSDYNLKIYVLMNLALPKGNKDIFLPI-QIEDSGFKEYVFLGEVPLMTPKGTFIFNGCERIIVSQIVRSPGVYYKYLQKDKKSFYEATIISNYGSWLSFELEYNLIWVKIDKQYKIPINWFLVSLGLTENEIFESLRNYDFLQKSIKSLNGIIYQKMFKENEFGN---------------------YNASLLASVFRIKELITTRLFNNSSYDLGEIGRKKLNKRLGINLPLNVKFLTSLDILKTIDNLIDVSFYNEKLDEIDSLENRRVRSIGELIQSQVRIALTRLGKNFSRNEKLASEIFGLKKVKKRSSKKSK-----NIQTQKSKYNIKDSVGFQDILTPSALVSSKILTSLIREFFGLSPLSQYFDEINPLAQLTHKRRISSLGPGGLNSDHVSFTARDIHPTQYGRLCPIETPEGQRAGLITSLATHAKIDQYGFIKTPFFKVYKGQVLKNGVPIYLTAEKEALYKVAAADIALTPDNFFKEHIIPVRFNNEFILTDSFNVNFVAISPIQILAAGASLIPFLEHNDANRALMGSNMQRQALPLLQAQKPIVGTGIECQIALDSLVSVLNLEEGVVESVSADRIIVLTNNKNKPTKVYFLDKFRRSNQETIINQQPIVWPGQLVKAGQIIADGPATEEGELALGQNLRVAYLPWEGYNYEDAIIVSERLIHDDLFSSLHIEKYELYLMENNQGLEELTRDIPRVDEEILSKLDKNGLVKKGTFVRGGDILVGKITPIIASEELPESKLLRAVFEIESPEPDDTSLKVPNEVSGRVIDISIASRENGDTLETGVYQIFRISIAQIKKIKIGDKISGRHGNKGVISKIVPIEDLPFLPDGNTIDVLLNPLGVPSRMNVGQIFECLLGFAGDYLNQRYKVLPFDEMYCSEASRILVNKTLCKASKSTKNCWLFNPSSPGKILLTDGRTGENFDNPILVGKPYLLKLMHLVDKKMHARSTGPYSLVTQQPLKGKSNNGGQRFGEMEVWALQAYGVAYTLQELLTLKSDDMKGRNEVYKAIVKGHPIPKPRIPESFRVLLRELNSLGLDLTAYQLEKLNNSELGNVDINLMSLL 1124          
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Match: A0A140G1K0_UNDPI (DNA-directed RNA polymerase subunit beta n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A140G1K0_UNDPI)

HSP 1 Score: 1469 bits (3804), Expect = 0.000e+0
Identity = 742/890 (83.37%), Postives = 820/890 (92.13%), Query Frame = 0
Query:  260 AYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKLDINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGELLQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITNKKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASGDVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINLLDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDGEIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQDDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKGTFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGISGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKGVISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLTDGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHSIPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLK 1149
            +YN+S+L+++FR++ELINERLL+KS+YDLGEVGRIKLNKKL I+LP   R LTSLDILK IDKLIHIS +NEKLDDIDNLENRRVRSVGELLQLQVRVAL R++KK++TDEKLT DMFR+KK +      S  KK+ +I  K  K  ++ I  +ETLMPN+L+N+KVLTSVIREFFGLSPLSQYFDE+NALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLI+SLATHA+IN YGFITTPFFRVYKGKV+    PI+LTAEQE  Y VASGDVLLT+D FF+T  VPVR +NEFIIVD+ +V+F+AVSPIQI+A+GASLIPFLEHDDANRALMGSNMQRQAVPLLYPKK IIGTGIEHQIAADSQVV+INLL+G+ D V +DRI I+DNKN+GSSK+YFLDKYRRSNQETIINQKPLIW GEIVKPGQIIADGPGT+ GELALGQNLTVAYMPWEGYN+EDAILVS+RLVQ+DLFTSIHIEKYELQL+DD  ++EEIT +IPNI+ + + NLD NGIIKKGTFVN GDILVGKITPI+E++ELPESKLLRAIFNI+SPEPED+SLRVPNGISGRVIEIQTASREKGD + SGVYEWV ISIAQIKKI+IGDK+SGRHGNKGVISKIIP  DMPFLPDGT+VDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKV+PFDEMY+PNASR+LINK LKKAAKKT K WLFNK SPGK+LLTDGRTGE+FDN +LVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVF AIIKGH IPEPG+PESF VLLRELNALGLD+TTH+IGKLDNGE+ SYKVNLLTL+K
Sbjct:   13 SYNKSMLMSVFRIRELINERLLNKSLYDLGEVGRIKLNKKLGISLPLNIRILTSLDILKAIDKLIHISSYNEKLDDIDNLENRRVRSVGELLQLQVRVALNRLRKKITTDEKLTPDMFRVKKTRRG----STDKKSQDIKIKGNKNFEEDIPLEETLMPNDLVNAKVLTSVIREFFGLSPLSQYFDEINALAQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGLIASLATHAKINNYGFITTPFFRVYKGKVLRELGPIYLTAEQETIYRVASGDVLLTKDEFFQTTTVPVRFYNEFIIVDSVSVDFIAVSPIQIIAIGASLIPFLEHDDANRALMGSNMQRQAVPLLYPKKPIIGTGIEHQIAADSQVVIINLLNGVVDSVSADRIIILDNKNIGSSKVYFLDKYRRSNQETIINQKPLIWTGEIVKPGQIIADGPGTDGGELALGQNLTVAYMPWEGYNYEDAILVSERLVQEDLFTSIHIEKYELQLVDDSASIEEITTSIPNIDTDAICNLDTNGIIKKGTFVNPGDILVGKITPIVEDEELPESKLLRAIFNIKSPEPEDTSLRVPNGISGRVIEIQTASREKGDNLASGVYEWVCISIAQIKKIRIGDKISGRHGNKGVISKIIPIHDMPFLPDGTVVDVILNPLGVPSRMNVGQIFECLLGFAGDYLNRRFKVVPFDEMYRPNASRILINKTLKKAAKKTNKPWLFNKSSPGKVLLTDGRTGEIFDNSVLVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKSKHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFNAIIKGHPIPEPGVPESFKVLLRELNALGLDITTHQIGKLDNGEMASYKVNLLTLVK 898          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7F3_ECTSI0.000e+088.01DNA-directed RNA polymerase subunit beta n=9 Tax=E... [more]
A0A1I9LV95_9PHAE0.000e+084.88DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A0R6M4L3_UNDPI0.000e+081.63DNA-directed RNA polymerase subunit beta n=27 Tax=... [more]
A0A8F0F9J7_9PHAE0.000e+080.03DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A8F0FB00_9PHAE0.000e+075.58DNA-directed RNA polymerase subunit beta n=1 Tax=D... [more]
A0A2R4QPV0_9PHAE0.000e+076.49DNA-directed RNA polymerase subunit beta n=3 Tax=F... [more]
A0A141BSD1_9PHAE0.000e+076.48DNA-directed RNA polymerase subunit beta n=16 Tax=... [more]
A0A8F0F779_9PHAE0.000e+069.28DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A2I4Q2B1_9PHAE0.000e+066.06DNA-directed RNA polymerase subunit beta n=1 Tax=D... [more]
A0A140G1K0_UNDPI0.000e+083.37DNA-directed RNA polymerase subunit beta n=1 Tax=U... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007642RNA polymerase Rpb2, domain 2PFAMPF04561RNA_pol_Rpb2_2coord: 142..345
e-value: 2.3E-23
score: 82.8
IPR019462DNA-directed RNA polymerase, beta subunit, external 1 domainPFAMPF10385RNA_pol_Rpb2_45coord: 523..587
e-value: 3.2E-8
score: 33.7
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 652..1051
e-value: 8.8E-135
score: 449.7
NoneNo IPR availableGENE3D3.90.1800.10coord: 1039..1091
e-value: 4.3E-11
score: 45.0
NoneNo IPR availableGENE3D3.90.1100.10coord: 11..164
e-value: 1.3E-22
score: 82.3
coord: 577..644
e-value: 1.0E-18
score: 69.5
NoneNo IPR availableGENE3D2.40.50.100coord: 646..719
e-value: 4.2E-19
score: 70.0
NoneNo IPR availablePANTHERPTHR20856:SF20DNA-DIRECTED RNA POLYMERASE SUBUNIT BETAcoord: 11..1128
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 12..1127
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 442..510
e-value: 6.6E-26
score: 90.3
IPR007641RNA polymerase Rpb2, domain 7PFAMPF04560RNA_pol_Rpb2_7coord: 1053..1126
e-value: 6.7E-23
score: 80.9
IPR014724RNA polymerase Rpb2, OB-foldGENE3D2.40.50.150coord: 758..897
e-value: 3.0E-48
score: 165.8
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 720..757
e-value: 2.0E-7
score: 33.0
coord: 972..1029
e-value: 9.1E-12
score: 47.1
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 11..1128
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 889..901
IPR010243DNA-directed RNA polymerase beta subunit, bacterial-typeHAMAPMF_01321RNApol_bact_RpoBcoord: 6..1129
score: 11.173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:120941..124402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14989.1mRNA_P-fluviatile_contig89.14989.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 120941..124402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14989.1 ID=prot_P-fluviatile_contig89.14989.1|Name=mRNA_P-fluviatile_contig89.14989.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1154bp
MKHSIEENKKQKSPIILPDLSEVQRISFCWFLTEGLPEELTSCPSILNNN
SGIELIIYGQEYKIYYPGFAILNALTKKGNYNLRVYVLMSLKKNEIIKNG
VVQLEDFSIKERVFFGEIPLLTEKGTFIFNGCERVIISQIIRSPGVYYKQ
IIKDKKISYEGTIISKYGSWLTFELEYNLIWVKFDKQYKIPINWFLVGFS
LDDSQVYQTVQNFEFLIKSLEAMRSVIYSKMVSNPKKSKSQSSKIQQDKN
RDQEKERNEAYNRSILLTIFRVQELINERLLDKSVYDLGEVGRIKLNKKL
DINLPPTRRTLTSLDILKVIDKLIHISFHNEKLDDIDNLENRRVRSVGEL
LQLQVRVALGRIKKKVSTDEKLTSDMFRIKKKKLSLNKKSKPKKTNNITN
KKLKLVKDKIFSKETLMPNELLNSKVLTSVIREFFGLSPLSQYFDEVNAL
AQLTHKRRISSLGPGGLNSEHVSFAARDIHPTQYGRLCPIETPEGQKAGL
ISSLATHARINKYGFITTPFFRVYKGKVIYGSSPIHLTAEQEAKYNVASG
DVLLTQDHFFRTNRVPVRSFNEFIIVDASNVNFLAVSPIQILAVGASLIP
FLEHDDANRALMGSNMQRQAVPLLYPKKSIIGTGIEHQIAADSQVVLINL
LDGITDWVCSDRIRIIDNKNLGSSKLYFLDKYRRSNQETIINQKPLIWDG
EIVKPGQIIADGPGTEEGELALGQNLTVAYMPWEGYNFEDAILVSQRLVQ
DDLFTSIHIEKYELQLIDDRDTVEEITRAIPNIEQEELDNLDANGIIKKG
TFVNGGDILVGKITPILEEDELPESKLLRAIFNIESPEPEDSSLRVPNGI
SGRVIEIQTASREKGDTMPSGVYEWVSISIAQIKKIKIGDKLSGRHGNKG
VISKIIPTDDMPFLPDGTIVDVILNPLGVPSRMNVGQIFECLLGFAGDYL
NRRFKVIPFDEMYKPNASRMLINKALKKAAKKTTKSWLFNKFSPGKILLT
DGRTGEVFDNPILVGKPYILKLIHLVDKKMHARSTGSYSLVTQQPLGGKS
KHGGQRFGEMEVWALEAFGVAYTLQELLTIKSDDINGRHEVFTAIIKGHS
IPEPGIPESFNVLLRELNALGLDMTTHEIGKLDNGEITSYKVNLLTLLKP
TGV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007642RNA_pol_Rpb2_2
IPR019462DNA-dir_RNA_pol_bsu_external_1
IPR007120DNA-dir_RNAP_su2_dom
IPR007645RNA_pol_Rpb2_3
IPR007641RNA_pol_Rpb2_7
IPR014724RNA_pol_RPB2_OB-fold
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS
IPR010243RNA_pol_bsu_bac