prot_P-fluviatile_contig84.14881.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig84.14881.1
Unique Name	prot_P-fluviatile_contig84.14881.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	247

Homology

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: D7FL43_ECTSI (UDP-glucose 4-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL43_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 7.230e-131
Identity = 195/249 (78.31%), Postives = 210/249 (84.34%), Query Frame = 0

Query:    1 MQQRRPRSMWPPFISLCLL------FPESMAFAARVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            M+Q + RS+W P  +   L          MAFAARVLVTGGAGYIGSHTC+ELI AGEKVVVVDDLSN+VEESLNRVRELTKCDDDQL+FRKVNLLD+ ALE VF DYEFDSCVHFAGLKAVGESV KPLLYYRNNIEGTLNL+ECMQKQP CRKLVFSSSATVYGEPDKLPLDESS+VGVGITNPYG TKYMIEEILRD+SK+D SWDILLLRYFNPIGAHESGRMG  P+       P ++  V VG
Sbjct:    1 MRQAQRRSLWAPVATTVALALGVTNVRPGMAFAARVLVTGGAGYIGSHTCVELIKAGEKVVVVDDLSNAVEESLNRVRELTKCDDDQLVFRKVNLLDQPALESVFNDYEFDSCVHFAGLKAVGESVAKPLLYYRNNIEGTLNLVECMQKQPGCRKLVFSSSATVYGEPDKLPLDESSSVGVGITNPYGRTKYMIEEILRDMSKSDPSWDILLLRYFNPIGAHESGRMGEDPEGIPNNLMP-FVAQVCVG 248

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: A0A835YLY8_9STRA (Galactose-4-epimerase, UDP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY8_9STRA)

HSP 1 Score: 312 bits (800), Expect = 2.140e-102
Identity = 158/216 (73.15%), Postives = 180/216 (83.33%), Query Frame = 0

Query:   10 WPPFISLCLLFPESMAFAARVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIP 225
            W    +L  L P + AFA RVLVTGGAGYIGSHTCLELI AGE+VVVVD+L N+VEESL RV +LT C+  QL FRKV+LLDRK L KVFE+++FDSC+HFAGLKAVGESV KPL+YYRNNIEGTLNL+E M++   C+KLVFSSSATVYG P+KLPLDE S VG GITNPYG TKYMIEEILRD   AD +W+IL+LRYFNPIGAHESGR+G  P
Sbjct:    8 WAALSALVTLSPCAQAFA-RVLVTGGAGYIGSHTCLELIKAGEEVVVVDNLINAVEESLERVIQLTGCNRKQLQFRKVDLLDRKGLRKVFEEFKFDSCIHFAGLKAVGESVAKPLMYYRNNIEGTLNLVEAMREH-GCKKLVFSSSATVYGTPEKLPLDEKSRVGPGITNPYGRTKYMIEEILRDEQVADPTWEILILRYFNPIGAHESGRIGEDP 221

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: A0A6V1XCR0_HETAK (UDP-glucose 4-epimerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XCR0_HETAK)

HSP 1 Score: 276 bits (705), Expect = 1.150e-88
Identity = 140/216 (64.81%), Postives = 168/216 (77.78%), Query Frame = 0

Query:   28 ARVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            + +LVTGGAGYIGSHTC+EL+NAG+KVVVVD+L NS EESL RV+E+T C    LIFR V+LLDR AL KVF+++ FD+CVHFAGLKAVGESV  PL YYRNNIEGTLNLL+CM K+  C+ +VFSSSATVYG+P++LP+ E  T+    TNPYG TK  IEEILRD+  +D SW I+LLRYFNPIGAH SGR+G  PK       P ++  V VG
Sbjct:   22 SHILVTGGAGYIGSHTCVELLNAGKKVVVVDNLCNSDEESLRRVKEITSCKSSDLIFRNVDLLDRAALGKVFDEFTFDACVHFAGLKAVGESVQIPLSYYRNNIEGTLNLLDCM-KEKGCKAIVFSSSATVYGDPERLPIAEDGTLRS--TNPYGRTKLFIEEILRDLHVSDPSWRIMLLRYFNPIGAHPSGRIGEDPKGIPNNLMP-FIAQVCVG 233

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: A0A4D9CZK9_9STRA (UDP-glucose 4-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK9_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.070e-82
Identity = 131/228 (57.46%), Postives = 165/228 (72.37%), Query Frame = 0

Query:   16 LCLLFPESMAFAARVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            + + F +S AFA  +LVTGGAGYIGSHTC EL+ AG ++VVVD+L NS E+S+ RV+E+T C    L FR ++LL+ + L+ +F++Y FD+C+HFAGLKAVGESV++PL YY NNI GTLNLLE M K   C+ +VFSSSATVYG+P+KLP+ E   +    TNPYG TK  IEE+LRD   AD  W IL+LRYFNPIGAHESGR+G  P        P +L  V VG
Sbjct:    4 MLVFFVQSQAFAGHILVTGGAGYIGSHTCCELLKAGRRIVVVDNLVNSCEDSVERVKEITGCASGALEFRNLDLLNLEGLDDLFKEYSFDACIHFAGLKAVGESVSQPLTYYHNNIVGTLNLLEVMNKYK-CKNMVFSSSATVYGDPEKLPITEDQRLQA--TNPYGRTKLFIEEMLRDQHTADKDWSILILRYFNPIGAHESGRIGEDPLGIPNNLMP-FLAQVCVG 227

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: A0A7S2W7X1_9STRA (UDP-glucose 4-epimerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7X1_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.120e-79
Identity = 128/214 (59.81%), Postives = 159/214 (74.30%), Query Frame = 0

Query:   30 VLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            +LVTGGAGYIGSHTCLEL+ AG + VVVD+L NS EE+L RVREL KC  D L FR V++ D  ALEKV +++  DSC+HFAGLKAVGESV +P++YY NNI GT+ LL+ + K    RK VFSSSATVYG+P++LPL ES  +    TNPYG TK  IE+ILRD++ AD +W I++LRYFNPIGAHESGR+G  P+       P ++  V VG
Sbjct:    2 ILVTGGAGYIGSHTCLELLEAGRRCVVVDNLCNSDEEALRRVRELAKCSSDALEFRHVDMRDEAALEKVLDEFRIDSCIHFAGLKAVGESVKQPVMYYENNIGGTVQLLKSLAKY-GVRKFVFSSSATVYGDPEELPLKESCRLST--TNPYGRTKLFIEDILRDLAVADDTWRIIILRYFNPIGAHESGRIGEDPQGIPNNLMP-FISQVCVG 211

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: A0A521GZS4_9BACT (UDP-glucose 4-epimerase n=1 Tax=Candidatus Saccharibacteria bacterium TaxID=2026720 RepID=A0A521GZS4_9BACT)

HSP 1 Score: 245 bits (626), Expect = 3.960e-77
Identity = 127/215 (59.07%), Postives = 159/215 (73.95%), Query Frame = 0

Query:   29 RVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            RVLVTGGAGYIGSHT +EL+ AG + VVVD+L NS  ESLNR++++T   D  ++F +V+L D+ ALEKVF    FD+ +HFAGLKAVGESV KPL YY NNI+ TL L E MQ     +KL+FSSSATVYG P+ LP+ E+S VGVG+TNPYG TKYMIE+IL+D+  +D++W I LLRYFNPIGAH SG +G  P  +     P ++  V VG
Sbjct:    2 RVLVTGGAGYIGSHTVVELLQAGHEPVVVDNLVNSSAESLNRIKQIT---DKPVVFYEVDLCDKPALEKVFAKESFDAVIHFAGLKAVGESVAKPLEYYHNNIDSTLTLCEVMQSHA-VKKLIFSSSATVYGNPETLPVKETSQVGVGVTNPYGQTKYMIEQILQDLVVSDSAWGITLLRYFNPIGAHPSGLIGEDPNGTPNNLVP-FISQVAVG 211

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: UPI0003B73B8B (UDP-glucose 4-epimerase GalE n=1 Tax=Desulfospira joergensenii TaxID=53329 RepID=UPI0003B73B8B)

HSP 1 Score: 241 bits (616), Expect = 1.130e-75
Identity = 127/215 (59.07%), Postives = 157/215 (73.02%), Query Frame = 0

Query:   29 RVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            ++LVTGGAGYIGSHTC+EL+N    VVV+D+LSNS EESLNRVR++T  D   L+F K +LLD+ A+EK+F+D+E D+ +HFAGLKAVGESV  PL Y+ NNI GTLNLLE M      R +VFSSSATVYG+P  LP+ E   + V  TNPYG TK MIEEILRD+  +D  WDI LLRYFNP+GAHESG +G  P+       P ++  V +G
Sbjct:    2 KILVTGGAGYIGSHTCVELLNENYDVVVLDNLSNSSEESLNRVRKITGKD---LVFHKADLLDKPAVEKIFKDHEIDAVIHFAGLKAVGESVDIPLRYFHNNITGTLNLLEVMG-DAGVRTIVFSSSATVYGDPASLPIKEDFPLSV--TNPYGRTKLMIEEILRDLHVSDNEWDIALLRYFNPVGAHESGLIGEDPQGIPNNLVP-YIARVAIG 209

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: UPI0018CDC5A7 (UDP-glucose 4-epimerase GalE n=1 Tax=Cytobacillus firmus TaxID=1399 RepID=UPI0018CDC5A7)

HSP 1 Score: 240 bits (613), Expect = 3.030e-75
Identity = 124/196 (63.27%), Postives = 152/196 (77.55%), Query Frame = 0

Query:   30 VLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIP 225
            +LVTGGAGYIGSH  +EL+N G K+V++D+L+NS  ES+NRV+ELT  D     F + +LLD+ ALE +FE Y+FD+ +HFAGLKAVGESV+ PL YY NNI GTLNL E M    D +KLVFSSSATVYG PD++P+DES  +    TNPYG TK MIEEILRD++ +D+SW I LLRYFNPIGAHESGR+G  P
Sbjct:    3 ILVTGGAGYIGSHAAVELLNNGYKIVILDNLTNSQMESINRVKELTGQD---FPFYQYDLLDKDALESLFEKYQFDAVMHFAGLKAVGESVSIPLKYYHNNITGTLNLCEVMAAH-DVKKLVFSSSATVYGHPDRVPIDESFPLSA--TNPYGRTKLMIEEILRDLNTSDSSWRIALLRYFNPIGAHESGRIGENP 192

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: UPI0018CE60AB (UDP-glucose 4-epimerase GalE n=1 Tax=Cytobacillus firmus TaxID=1399 RepID=UPI0018CE60AB)

HSP 1 Score: 238 bits (608), Expect = 1.770e-74
Identity = 127/214 (59.35%), Postives = 157/214 (73.36%), Query Frame = 0

Query:   30 VLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVG 243
            VLVTGGAGYIGSH  +EL+N G ++VV+D+LSNS  ES+ RV+ELT     +  F   +LLD++AL+++F +Y+FDS +HFAGLKAVGESV  PL YY NNI GTLNL E M K  D +KLVFSSSATVYG PD++P+DES  +    TNPYG TK MIEEILRD+  +D+SW I LLRYFNPIGAHESGR+G  P        P ++  V +G
Sbjct:    3 VLVTGGAGYIGSHAAVELLNNGYEIVVLDNLSNSQMESIRRVKELT---GKEFPFYSYDLLDKEALDQLFSNYQFDSVMHFAGLKAVGESVEIPLTYYHNNITGTLNLCEVMDKY-DVKKLVFSSSATVYGNPDRVPIDESFPLSA--TNPYGRTKLMIEEILRDLYVSDSSWRIALLRYFNPIGAHESGRIGENPNGIPNNLMP-YITQVAIG 209

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BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Match: A9UV21_MONBE (UDP-glucose 4-epimerase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UV21_MONBE)

HSP 1 Score: 238 bits (608), Expect = 1.940e-74
Identity = 119/200 (59.50%), Postives = 154/200 (77.00%), Query Frame = 0

Query:   27 AARVLVTGGAGYIGSHTCLELINAGEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFEDYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKLVFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADTSWDILLLRYFNPIGAHESGRMGRIPK 226
            A ++LVTGGAGYIG+HTC+ELI AG +V++VD+L N+   ++ RV E+      ++ F +++LLD++A++KVF ++EF + +HFAGLKAVGES  KP LYY NNI GTLNLL+ M KQ  C  LVFSSSATVYG+P  LPLDE   VG   TNPYG TKY IEE+ RD++KAD+ W+I+LLRYFNPIGAH SGR+G  P+
Sbjct:    2 ARKILVTGGAGYIGTHTCIELIAAGFEVIIVDNLINASRVAVERVEEIV---GQKITFLEIDLLDKEAIDKVFAEHEFFAVIHFAGLKAVGESTQKPWLYYHNNITGTLNLLDSM-KQHKCFNLVFSSSATVYGDPKYLPLDEKHPVGA-CTNPYGKTKYFIEEMCRDMAKADSQWNIVLLRYFNPIGAHASGRIGEDPQ 196

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig84.14881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FL43_ECTSI	7.230e-131	78.31	UDP-glucose 4-epimerase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YLY8_9STRA	2.140e-102	73.15	Galactose-4-epimerase, UDP n=1 Tax=Tribonema minus...	[more]
A0A6V1XCR0_HETAK	1.150e-88	64.81	UDP-glucose 4-epimerase n=2 Tax=Heterosigma akashi...	[more]
A0A4D9CZK9_9STRA	1.070e-82	57.46	UDP-glucose 4-epimerase n=2 Tax=Monodopsidaceae Ta...	[more]
A0A7S2W7X1_9STRA	2.120e-79	59.81	UDP-glucose 4-epimerase n=1 Tax=Rhizochromulina ma...	[more]
A0A521GZS4_9BACT	3.960e-77	59.07	UDP-glucose 4-epimerase n=1 Tax=Candidatus Sacchar...	[more]
UPI0003B73B8B	1.130e-75	59.07	UDP-glucose 4-epimerase GalE n=1 Tax=Desulfospira ...	[more]
UPI0018CDC5A7	3.030e-75	63.27	UDP-glucose 4-epimerase GalE n=1 Tax=Cytobacillus ...	[more]
UPI0018CE60AB	1.770e-74	59.35	UDP-glucose 4-epimerase GalE n=1 Tax=Cytobacillus ...	[more]
A9UV21_MONBE	1.940e-74	59.50	UDP-glucose 4-epimerase n=1 Tax=Monosiga brevicoll...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 30..226 e-value: 2.3E-75 score: 255.7
None	No IPR available	GENE3D	3.90.25.10		coord: 227..238 e-value: 2.3E-75 score: 255.7
None	No IPR available	PANTHER	PTHR43725:SF22	UDP-GLUCOSE 4-EPIMERASE 2	coord: 25..229
None	No IPR available	PANTHER	PTHR43725	FAMILY NOT NAMED	coord: 25..229
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..27
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..246
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..27 score: 0.764
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 30..227 e-value: 3.6E-42 score: 144.5
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 28..225

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig84	contig	P-fluviatile_contig84:326288..332409 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig84.14881.1	mRNA_P-fluviatile_contig84.14881.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig84 321820..332409 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig84.14881.1 ID=prot_P-fluviatile_contig84.14881.1|Name=mRNA_P-fluviatile_contig84.14881.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=247bp
MQQRRPRSMWPPFISLCLLFPESMAFAARVLVTGGAGYIGSHTCLELINA
GEKVVVVDDLSNSVEESLNRVRELTKCDDDQLIFRKVNLLDRKALEKVFE
DYEFDSCVHFAGLKAVGESVTKPLLYYRNNIEGTLNLLECMQKQPDCRKL
VFSSSATVYGEPDKLPLDESSTVGVGITNPYGATKYMIEEILRDVSKADT
SWDILLLRYFNPIGAHESGRMGRIPKASRTTSCPSWLRCVWVGGNI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001509	Epimerase_deHydtase
IPR036291	NAD(P)-bd_dom_sf