prot_P-fluviatile_contig80.14749.1 (polypeptide) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: D7FPX0_ECTSI (RNA polymerase sigma factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX0_ECTSI) HSP 1 Score: 440 bits (1131), Expect = 1.390e-146 Identity = 301/566 (53.18%), Postives = 355/566 (62.72%), Query Frame = 0
Query: 5 ARRRR--RVTSNSSPLLTRAFGAACLASATSLSAAFTVTSGLLCGGLCGVTSSP-------AAVSSTG---------GGLAAAIELRQRHGLEIESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAGPTIAS-------GERCERSPRRKPSLTFDEERALLAKIKEAHLLREVRERLELAATAANAKGNKAA---GRNGGGSVVAQIAVSAEAWAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPASALKELHRARREITDELGRRPSEVELANFFVNGVVA-DDSFPLSSESASASAGLTSAGQ--------VSPRRSRAVVGGEFSAKGSADNRDAQQQARIRRRRINLLSAVQRVTSIDRLMRASDGSTMVPLVDTLV---EEGDQLSQLSQQRRWNGGDEFSELLPRVLTPLQADLVRMACGLADGRPMSMSECSKELSLSVARTKSLFEGSLEKLRSAAAAENPRRLVRQ 530
ARRRR R + N+ P LTRA G ACLA ATSLSA F +G GG G+ S+ V G GG I LR+ H + + P A T A G R RR P+LT +EERALLAKIK A LR+++ LE AA A +G K A GR+ G A AV+ AWAREAG+EV+DL RVLQEG++AK+TLVERNMPMV +V QYRWRLRGGQ+S ADL+QEGAYALG+AAERFDP M NRF+T+ALY VRDKLDVALARGNSAISVPA+ALKE+HRARRE+T LGR PSE ELANFF NGVV D+ P +S + G+ G AV GEF+ K ++ +R+A+QQAR RRRR+NLLSAVQ+VTSIDRL+RASDGSTMVPLVDTLV E+G Q R GGD +ELLPRVLTP QA LVRMACGL+DG+PM+M+ECSKELSLSVARTKSLF+ SL+KLR+AA A++ RLVRQ
Sbjct: 5 ARRRRPTRPSPNTCPFLTRALGVACLAGATSLSAGFVTPAGCR-GGFYGINSAAXXXXXXATTVRQRGSVGGSKNPVGGRDGPIRLRRNHLAMVSA----------------------------------------TAEPPAATATDADAWAGATRGRRARGGARRTPALTTEEERALLAKIKNARTLRDIQRGLEAAAATAAGRGEKGALGDGRSADGG--AGTAVTMGAWAREAGVEVEDLPRVLQEGIEAKQTLVERNMPMVIRMVEGQYRWRLRGGQVSFADLLQEGAYALGVAAERFDPTMPNRFLTYALYTVRDKLDVALARGNSAISVPATALKEVHRARRELTGRLGRTPSEAELANFFANGVVVVGDAEPAAS---AGDGGIRRGGADXXXXXXXXXXXXXXAVTDGEFAVKAASSDREARQQARTRRRRLNLLSAVQKVTSIDRLIRASDGSTMVPLVDTLVGDLEDG--------QPRSAGGD-IAELLPRVLTPRQASLVRMACGLSDGKPMTMAECSKELSLSVARTKSLFDSSLQKLRAAAEADDLGRLVRQ 515
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A1E7F5Q4_9STRA (Sigma2 domain of RNA polymerase sigma factor (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5Q4_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 7.810e-17 Identity = 65/205 (31.71%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 149 LTFDEERALLAKIKEAHLLREVRERLELAATAANAKGNKAAGRNGGGSVVAQIAVSAEAWAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLR--------GGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPA---SALKELHRARREITDELGRRPSEVELANF 342
LT DEER + I++ H ++R+ LE + E WA+ GLEV L R++ +G +A+ LV N +VT++ Y + G L++ D+IQEG + L AAERF+P RF T+A Y +R ++ +++ + I +PA + L++L+RAR+E+ E+GR PS+ ELA++
Sbjct: 2 LTHDEEREITYSIRDLHKAVKIRDELE-----------------------DDEFPTEEDWAKACGLEVMVLRRIMSKGQEARTVLVSANAGLVTSIAKRHYHALKQATDAMGGVGTILTLQDMIQEGNFGLMKAAERFEPERGWRFSTYATYWIRQRILRSISDSSRVIRLPAHVTATLQKLNRARKEMAAEIGRVPSDPELAHY 183
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A6I5N2M8_9CYAN (RpoD/SigA family RNA polymerase sigma factor n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5N2M8_9CYAN) HSP 1 Score: 88.2 bits (217), Expect = 1.660e-15 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 0
Query: 208 WAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPASALKELHR---ARREITDELGRRPSEVELA 340
WA++AGL V+ L +V+Q+G +AKR +VE N+ +V ++ + L + DLIQEG L AE+FDP RF T+A + +R + A+A AI +P ++L++ A+R++T LGR + ELA
Sbjct: 62 WAQQAGLSVEALQQVIQQGQRAKRKMVESNLRLVVSIAKKYLK-----SNLEMLDLIQEGTIGLQRGAEKFDPTKGYRFSTYAYWWIRQAMTRAIAEQGRAIRLPIHMSEKLYKIKQAQRQLTQTLGRSATVAELA 192
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A448YV05_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV05_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.030e-14 Identity = 51/146 (34.93%), Postives = 84/146 (57.53%), Query Frame = 0
Query: 208 WAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLR--------GGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPA---SALKELHRARREITDELGRRPSEVELANF 342
WAR L+V +L +V+ EG +++ LV N +VT++ Y + G L++ D+IQEG L AAERF+P RF T+A Y +R ++ ++ + I +PA + L++ ++ARRE+ E+GR PS+ ELA++
Sbjct: 312 WARACDLDVSELRKVMDEGQESRSLLVSANAGLVTSIAKRHYHVLKQMTNAGGGVGTILTLQDMIQEGNLGLMKAAERFEPERGWRFSTYATYWIRQRILQSITDTSRVIRLPAHVTATLQKFNKARREMAAEIGRMPSDAELAHY 457
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A7S2XSD2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSD2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.350e-13 Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 0
Query: 208 WAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLR---------GGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPA---SALKELHRARREITDELGRRPSEVELAN 341
WA E V +L +V+ +G +A+ LV N +VT + Y W L+ G L++ DLIQEG L AAERFDP+ RF T+A + VR ++ ++A + I +P + LK + +AR+E+T ++GR PS ELA+
Sbjct: 28 WADECDFSVMELRQVMHDGREARSKLVACNAGLVTQIAKRHY-WTLKRSNQDGRGVGTILTMQDLIQEGNLGLMEAAERFDPSKGFRFSTYATWWVRQRVLRSIADYSRVIRLPVHVHTMLKNISKARKEMTKQIGRDPSMPELAH 172
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A6P0ZD32_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=2 Tax=unclassified Sphaerospermopsis TaxID=2646443 RepID=A0A6P0ZD32_9CYAN) HSP 1 Score: 81.6 bits (200), Expect = 2.640e-13 Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 0
Query: 206 EAWAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVP---ASALKELHRARREITDELGRRPSEVELA 340
E WA+ A LE +L + + +G AKR +VE N+ +V +V + + + DLIQEG+ + E+FDP RF T+A + +R + A+A I +P L ++ +A+R+++ +LGR PS VELA
Sbjct: 60 EEWAKAAQLEAPELKQAIAKGETAKRKMVEANLRLVVSVAKKYIK-----RNVDLLDLIQEGSIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKAQRQLSQQLGRAPSMVELA 192
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A1Y1IKU7_KLENI (RNA polymerase sigma factor n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKU7_KLENI) HSP 1 Score: 83.6 bits (205), Expect = 3.440e-13 Identity = 55/150 (36.67%), Postives = 80/150 (53.33%), Query Frame = 0
Query: 201 IAVSAEAWAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPA---SALKELHRARREITDELGRRPSEVELANFFVNGV 347
+ S E WA+ AG+ V+ L R + G +A++ LVE N+ +V N+ + L DL G L +AA+RFDPA+ NRF T+AL VR L A+ R I P + L L + RRE++ +LGR P+ E+A + GV
Sbjct: 455 VPASEEQWAKAAGVSVNALGRQIAAGKEARQRLVECNLRLVMFAANSMKHYP---NALPTEDLFLAGIQGLLIAADRFDPALGNRFSTYALPAVRSYLHRAIQRSGVLICAPVKRTTGLVNLDKVRRELSAKLGRLPTLDEIAKYKNVGV 601
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.510e-13 Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 0
Query: 208 WAREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPASA---LKELHRARREITDELGRRPSEVELA 340
WA G++ D L ++ +AK T++ N+ + ++ R+R RG L++ DLIQEG++ L AAERFDP +F T+A + ++ + A+A + I +P L + RA RE++ ELGR P++ ELA
Sbjct: 68 WAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAK---RYRRRG--LALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELGRHPTDEELA 198
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: UPI00168778E5 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI00168778E5) HSP 1 Score: 79.7 bits (195), Expect = 1.370e-12 Identity = 70/312 (22.44%), Postives = 145/312 (46.47%), Query Frame = 0
Query: 214 LEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVPASALKELHRAR---REITDELGRRPSEVELANFFVNGVVADDSFPLSSESASASAGLTSAGQVSPRRSRAVVGGEFSAKGSADNRDAQQQARIRRRRINLLSAVQRVTSIDRLMRASDGSTMVPLVDTLVEEGDQLSQLSQQRRWNGGDEFSELLPRVLTPLQADLVRMACGLADGRPMSMSECSKELSLSVARTKSLFEGSLEKLRSAAAAE 522
++V ++++ L++G +AK+ ++E N+ +V ++ ++ RG L + +LIQEG+ L E+FDP+ RF T+A + +R + ALA + +P +++L++ + RE+T LGR P++ ELA++ G + S L S+ Q S++ L+ + S + L++ + + +++Q R + ++L VLT +A+++R+ G G+P+++++ K+L++S R + L +++KLR E
Sbjct: 77 IDVAEVNQRLEQGQRAKQRMIEANLRLVVSIAR---KYLNRG--LDLLELIQEGSLGLERGVEKFDPSKGFRFSTYAYWWIRQGITRALATQGRMVRLPVHIVEKLNKLKKSLRELTQRLGRGPTQQELADY--------------------------------------TGFDLETLRS------------------LRSSYQAAISLNTLVGDDEKSELGDLLEDKLNASPE-EHVAEQLRVQ---QIEQVLEGVLTEREAEVIRLRYGFDSGKPLTLADVGKQLNVSRERVRQLETTAMKKLRQPEVRE 323
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Match: K9V823_9CYAN (RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Calothrix sp. PCC 6303 TaxID=1170562 RepID=K9V823_9CYAN) HSP 1 Score: 79.3 bits (194), Expect = 2.930e-12 Identity = 80/311 (25.72%), Postives = 131/311 (42.12%), Query Frame = 0
Query: 209 AREAGLEVDDLSRVLQEGVQAKRTLVERNMPMVTNVVNAQYRWRLRGGQLSVADLIQEGAYALGLAAERFDPAMQNRFITFALYMVRDKLDVALARGNSAISVP---ASALKELHRARREITDELGRRPSEVELANFFVNGVVADDSFPLSSESASASAGLTSAGQVSPRRSRAVVGGEFSAKGSADNRDAQQQARIRRRRINLLSAVQRVTSIDRLMRASDGSTMVPLVDTLVEEGDQLSQLSQQRRWNGGDEFSELLPRVLTPLQADLVRMACGLADGRPMSMSECSKELSLSVARTKSLFEGSLEKLR 516
A E L L L +G AKR ++ N+ +V ++ R+ RG + DLIQEGA L A+E+FDP +F T+A + +R + A+A I +P L +L +A+RE+ +LGR PSE+ELA ++ P + R Q ++RR+ ++L V + + L+D L+E+ D S ++ E E+L VLTP + D++ + GL P ++ E +LS R + + ++ KLR
Sbjct: 129 AAEFSLTERQLENRLYQGRVAKRKMIRSNLRLVVSIAK---RYLNRG--VPFLDLIQEGAMGLNRASEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLKKAQRELKQQLGRNPSEIELAESL---------------------------EIPPSQLR-------------------QLQQLRRQSLSLNHRVGKEEDTE-------------LMD-LLEDEDNQSPEAKMNESMMRQEIWEVLGDVLTPREKDVISLRYGLTTSEPCTLEEVGNMFNLSRERVRQIQSKAMRKLR 374 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-fluviatile_contig80.14749.1 ID=prot_P-fluviatile_contig80.14749.1|Name=mRNA_P-fluviatile_contig80.14749.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=532bpback to top |