prot_P-fluviatile_contig8.14648.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14648.1
Unique Nameprot_P-fluviatile_contig8.14648.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length247
Homology
BLAST of mRNA_P-fluviatile_contig8.14648.1 vs. uniprot
Match: D8LKY5_ECTSI (PRA1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY5_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 2.070e-93
Identity = 153/181 (84.53%), Postives = 161/181 (88.95%), Query Frame = 0
Query:    1 MTEASELKDELTVLGQHLQRFFVEDRRPWAEFFGHVEQPKWTQADVKKRVSANFSFFTTNYLMICATCSAFYILRSPGLLLTLLASLCMFLYVFMSRRKTLVVLDVTLGMREKTIAAAVGSLLLLSLTGYIFTLLFSGIVGFTVCLLHATFRPPVARAVRRGGSGGGAPELHGGDGDLEGG 181
            M EASELKDELTVLGQH+ RFFV DRRPWAEFFG VEQPKWTQA+VKKRV+AN SFF TNYLMI AT +A YILRSPGLLLTLLASLCMFLYVFMSRRK LVVLDVTLG REKTIAAAV S+LLLS+TGYIF+L FSGI+G  VCLLHATFRPPVARAVR    GGG PELHGGDGDLEGG
Sbjct:    1 MAEASELKDELTVLGQHMHRFFVADRRPWAEFFGPVEQPKWTQAEVKKRVNANLSFFATNYLMIWATIAAVYILRSPGLLLTLLASLCMFLYVFMSRRKKLVVLDVTLGTREKTIAAAVASMLLLSVTGYIFSLQFSGILGCAVCLLHATFRPPVARAVRNT-RGGGPPELHGGDGDLEGG 180          
BLAST of mRNA_P-fluviatile_contig8.14648.1 vs. uniprot
Match: A0A836CGC4_9STRA (PRA1 family protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.890e-22
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   27 RPWAEFFGHVEQP-KWTQADVKKRVSANFSFFTTNYLMICATCSAFYILRSPGLLLTLLASLCMFLYVFMSRRKTLVVLDVTLGMRE--KTIAAAVGSLLLLSLTGYIFTLLFSGIVGFTVCLLHATFRPPVARAV 159
            RPWAEF G V  P KWT  D+++R+ AN  FF  NY ++ A  SA+YI+ SPGLLLTLL  L ++  V ++RRK  V ++  + + +  K   A V +++LL   GY+F L ++  +G  VCL HA  RPPVARA+
Sbjct:   21 RPWAEFVGPVAPPPKWTLPDIQRRLVANTRFFKANYALLVALMSAYYIVTSPGLLLTLLVCLMLYGAVLLTRRKNYVFMNGAVIVTDTVKMGVATVVTVILLGAMGYLFALQWAVSLGGLVCLAHALLRPPVARAL 156          
BLAST of mRNA_P-fluviatile_contig8.14648.1 vs. uniprot
Match: A0A6J1KAU7_CUCMA (PRA1 family protein n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1KAU7_CUCMA)

HSP 1 Score: 57.4 bits (137), Expect = 2.340e-6
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   26 RRPWAEFFGHVEQPK-WTQADVKKRVSANFSFFTTNYLMICATCSAFYILRSPGLLLTLLASLCM--FLYVFMSRRKTLVVLDVTLGMREKTIAAAVGSLLLLSLTGYIFTLLFSGIVGFTVCLLHATFRPP 154
            RRPW+E        +    ++   R+  NFS+F  NY+ +     AF +L  P  LLTLLA L    FLY+F    + LV+   T    E  +   V +++++ LT     L+ + ++GF++  +H  FR P
Sbjct:   47 RRPWSELVDRSSLARPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLP 178          
BLAST of mRNA_P-fluviatile_contig8.14648.1 vs. uniprot
Match: A0A7N0TGQ9_KALFE (PRA1 family protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TGQ9_KALFE)

HSP 1 Score: 52.8 bits (125), Expect = 8.930e-5
Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 0
Query:   20 RFFVEDRRPWAEFFGH--VEQPKWTQADVKKRVSANFSFFTTNYLMICATCSAFYILRSPGLLLTLLASLC--MFLYVFMSRRKTLVVLDVTLGMREKTIAAAVGSLLLLSLTGYIFTLLFSGIVGFTVCLLHATFRPP 154
            R     RRPW E        +P  + ++   RV  N+++F  NYL + AT  A  ++  P  LLTLLA L   +FLY+F    + L V   T   RE      V +++++ LT     L+ + ++G ++  +H  FR P
Sbjct:   39 RHAFSQRRPWLELLDRNSFSRPD-SLSEATSRVRKNYTYFRINYLTLLATVLALSLVSHPFSLLTLLALLSAWLFLYLFRPADQPLTVFGRTFSGRETLGILVVLTIVVIFLTSVGSLLISAILIGLSIVCVHGAFRVP 176          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKY5_ECTSI2.070e-9384.53PRA1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A836CGC4_9STRA3.890e-2245.59PRA1 family protein-domain-containing protein n=1 ... [more]
A0A6J1KAU7_CUCMA2.340e-631.06PRA1 family protein n=9 Tax=Cucurbitaceae TaxID=36... [more]
A0A7N0TGQ9_KALFE8.930e-530.94PRA1 family protein n=1 Tax=Kalanchoe fedtschenkoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 24..154
e-value: 1.0E-24
score: 86.8
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 22..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 78..95
NoneNo IPR availableTMHMMTMhelixcoord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3522534..3524741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14648.1mRNA_P-fluviatile_contig8.14648.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 3520822..3524976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14648.1 ID=prot_P-fluviatile_contig8.14648.1|Name=mRNA_P-fluviatile_contig8.14648.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=247bp
MTEASELKDELTVLGQHLQRFFVEDRRPWAEFFGHVEQPKWTQADVKKRV
SANFSFFTTNYLMICATCSAFYILRSPGLLLTLLASLCMFLYVFMSRRKT
LVVLDVTLGMREKTIAAAVGSLLLLSLTGYIFTLLFSGIVGFTVCLLHAT
FRPPVARAVRRGGSGGGAPELHGGDGDLEGGGGGNVGRGRPGPVNANMRL
RTRPVPGGGGAMGGMSTTPPRGGGLGAGFEAPSMMDPAASTHSHAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1