prot_P-fluviatile_contig8.14636.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14636.1
Unique Nameprot_P-fluviatile_contig8.14636.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length507
Homology
BLAST of mRNA_P-fluviatile_contig8.14636.1 vs. uniprot
Match: D7G2R7_ECTSI (Protein RFT1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R7_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.080e-89
Identity = 202/333 (60.66%), Postives = 222/333 (66.67%), Query Frame = 0
Query:   57 MLLAFIQRTSTFVLNVLLQRAMLSPSSTSNPDDADDSRDPTQTAPSSALEAYGAAAITLELISSSALFLAREPFRVALARSRVPPAASQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDEADRGRRSGRLRREAYRRRFVNTAWMSAPVGLAFAALVRLTYPWVIRNNAFAEVEENRQAASLVCFAAAVELLCEPLALIFQFRLLIDVRVKAEAAAVLVLGVSRYLLVTRAGMGILSFGYAQLLHSATLATAYVLLAVKDVAMTQAVAAGRTAGPPPLGVRAETERPGGRSSGAQRPEAPAAAAAG--QGFARVRGWLPRRPNRGDD 387
            MLLAF+QR STFVLNVLLQRAMLS +       A D+R P      SALE YGAAAITL+LISS+ALFLAREPFRVALARS+VP A  +                                 TG E +R R       EAYRRRFVNTAW+SAPVGLAFA LVRL YPWVIRN+ F  VEENRQAASLVC AAAVEL+CEPLALIFQ+RLL+DVRV+AEAAAVLVLGVSRYLLVTRAGMG+LSFGYAQL HS TL T YVL AVKDVA  +A A           + A T +P G +        P A   G  +GFARVRGWLP RP R DD
Sbjct:    1 MLLAFVQRASTFVLNVLLQRAMLSAA-------ASDTRQPRN----SALEEYGAAAITLDLISSTALFLAREPFRVALARSKVPIADEKTWVAGGNKGVAPGQQL-----------------TG-ERERARXXXXXX-EAYRRRFVNTAWISAPVGLAFAGLVRLAYPWVIRNDDFQGVEENRQAASLVCLAAAVELMCEPLALIFQYRLLVDVRVRAEAAAVLVLGVSRYLLVTRAGMGVLSFGYAQLFHSVTLFTWYVLFAVKDVARARAGAETTLPXXXXXTLVAATGQPPGTAR-------PLAQDGGDDEGFARVRGWLPSRPIRDDD 296          
BLAST of mRNA_P-fluviatile_contig8.14636.1 vs. uniprot
Match: A0A835YPZ4_9STRA (Protein RFT1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.560e-21
Identity = 55/84 (65.48%), Postives = 69/84 (82.14%), Query Frame = 0
Query:  240 QAASLVCFAAAVELLCEPLALIFQFRLLIDVRVKAEAAAVLVLGVSRYLLVTRAGMGILSFGYAQLLHSATLATAYVLLAVKDV 323
            QAA LVC AAA+EL CEP  LIFQ+RL++ VRV+AEAAAVL+LGV++YLLVTRAG+G+++FGYAQLLHS  L  AY     ++V
Sbjct:    7 QAAGLVCLAAALELACEPAVLIFQWRLMLGVRVRAEAAAVLILGVAKYLLVTRAGLGVVAFGYAQLLHSCALIVAYAAAVTREV 90          
BLAST of mRNA_P-fluviatile_contig8.14636.1 vs. uniprot
Match: A0A0L0D4I6_THETB (Protein RFT1 homolog n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4I6_THETB)

HSP 1 Score: 56.6 bits (135), Expect = 7.620e-5
Identity = 76/283 (26.86%), Postives = 107/283 (37.81%), Query Frame = 0
Query:   47 GAAVRGGSLLMLLAFIQRTSTFVLNVLLQRAMLSPSSTSNPDDADDSRDPTQTAPSSALEAYGAAAITLELISSSALFLAREPFRVALARSRVPPAASQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDEADRGRRSGRLRREAYRRRFVNTAWMSAPVGLAFAALVRLTYPWVIRNNAFAEVEENRQAASLVCFAAAVELLCEPLALIFQFRLLIDVRVKAEAAAVLVLGVSRYLLVTRAGMGILSFGYAQLLHSATLATAYVLLAVKDVAMTQAV 329
            GAA+ G +LL+ +    R ++FVLN L+   M                         A EAYG AA++L+L  S+ LFLAREP R A  R    PA ++A                                                          AW   P+GL  AA +      +  + A A V     A  L   AAAVEL  EPL +         VR + EA  VL+  +  Y  V  AG G++SF    L ++  +   Y L+A    A+++A+
Sbjct:    7 GAALTGATLLVGVQAGSRLASFVLNQLVVARM-------------------------APEAYGLAAVSLQLALSTVLFLAREPLRRAALRMAAAPADARAL--------------------------------------------------------AAW-GLPIGLVLAACLAAHSLILAPDPAAAAVPGAASALGLTLAAAAVELAAEPLYVAVLLEARYVVRAQIEAVGVLLRCIVTYAGVVAAGAGVVSFALGHLAYAGVVLVGY-LMAGSGFALSEAI 206          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2R7_ECTSI4.080e-8960.66Protein RFT1 homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YPZ4_9STRA6.560e-2165.48Protein RFT1 homolog n=1 Tax=Tribonema minus TaxID... [more]
A0A0L0D4I6_THETB7.620e-526.86Protein RFT1 homolog n=1 Tax=Thecamonas trahens AT... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007594RFT1PFAMPF04506Rft-1coord: 107..327
e-value: 1.0E-23
score: 83.9
IPR007594RFT1PANTHERPTHR13117ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATEDcoord: 106..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..262
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 263..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 291..295
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 319..506
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..318
NoneNo IPR availableTMHMMTMhelixcoord: 201..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3408105..3411262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14636.1mRNA_P-fluviatile_contig8.14636.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 3408011..3413465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14636.1 ID=prot_P-fluviatile_contig8.14636.1|Name=mRNA_P-fluviatile_contig8.14636.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=507bp
MELRRRNRDAGEASNEDVATLKEGFAVADERVAAAPSSETEVDAVVGAAV
RGGSLLMLLAFIQRTSTFVLNVLLQRAMLSPSSTSNPDDADDSRDPTQTA
PSSALEAYGAAAITLELISSSALFLAREPFRVALARSRVPPAASQAADAA
TAAAAPAATASGGGSGGGGGGGGSSSSSTGDEADRGRRSGRLRREAYRRR
FVNTAWMSAPVGLAFAALVRLTYPWVIRNNAFAEVEENRQAASLVCFAAA
VELLCEPLALIFQFRLLIDVRVKAEAAAVLVLGVSRYLLVTRAGMGILSF
GYAQLLHSATLATAYVLLAVKDVAMTQAVAAGRTAGPPPLGVRAETERPG
GRSSGAQRPEAPAAAAAGQGFARVRGWLPRRPNRGDDGAGGDADGGRGRL
RATQAGGGTSRSNAAETRAYRGGQDRARQGHLPEAGVRKRRKRRRRKWRF
GLQPERVSLRAGGVRDSQRVRVSCRETFVSASGRGGALDVQQARGGGSEG
PRPEGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007594RFT1