prot_P-fluviatile_contig8.14632.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14632.1
Unique Nameprot_P-fluviatile_contig8.14632.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length240
Homology
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BLAST of mRNA_P-fluviatile_contig8.14632.1 vs. uniprot
Match: D8LKX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX3_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.150e-37
Identity = 75/99 (75.76%), Postives = 84/99 (84.85%), Query Frame = 0 
Query:   45 MHLSRLGLEGEGKMLGTIALLLGSVMAIGALCGAAG--FSADEGGRLPLLAAVYLSAPLSLADLLGAVVFAWKREEVLRLDLEHEKTHGGGRRPGPLPP 141
            MHL+R+GLEGEGK+LG+IAL+LGS+MAIGALCGAAG  FSADEGGRLPLL AVYLSAPLSLADL+  V F  KR EVLRLDLEHE++ GG   PGP  P
Sbjct:    1 MHLNRIGLEGEGKLLGSIALVLGSMMAIGALCGAAGTMFSADEGGRLPLLGAVYLSAPLSLADLIAGVTFIVKRSEVLRLDLEHEQSRGGRPHPGPPSP 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKX3_ECTSI2.150e-3775.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..239
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3374348..3376414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14632.1mRNA_P-fluviatile_contig8.14632.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 3373632..3376414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14632.1 ID=prot_P-fluviatile_contig8.14632.1|Name=mRNA_P-fluviatile_contig8.14632.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=240bp
MRNRFASNTRVRLHRELSSPSFVPLTIFRGIAGIAFLCFGELFWMHLSRL
GLEGEGKMLGTIALLLGSVMAIGALCGAAGFSADEGGRLPLLAAVYLSAP
LSLADLLGAVVFAWKREEVLRLDLEHEKTHGGGRRPGPLPPAAAEPRRPP
VPDRRLPAPLRCFPLPCPCLLRAGGAHVPVGPPADRVQPGGPVAPRPGDR
PRGKGGRKLPVDRRARVAARRGGRRREAFGVGGLARGDG*
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