prot_P-fluviatile_contig8.14529.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14529.1
Unique Nameprot_P-fluviatile_contig8.14529.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length995
Homology
BLAST of mRNA_P-fluviatile_contig8.14529.1 vs. uniprot
Match: D7G633_ECTSI (WD40 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G633_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 4.750e-139
Identity = 371/835 (44.43%), Postives = 432/835 (51.74%), Query Frame = 0
Query:  190 GHAGQVLAMTF-APPFNVLVTSGEKDRMVRCWDMVLKPSLAAV---ATSRQAKAAEPQVMLKWLRPPTSGGGDHPPGSSGGVGGVGER--NDFEDASDVLVSGGASGTVNIWQLTLKHLVILKSLPGHTGAVTSACILPH-HVIVTGALDADIRVWANKTYQCKRVMKGHARGVVTIEYNPSQRIXXXXXXXXXXXXXXXXXXXVICRLSGHVCSLVAARASVFSSDVISMSMDGIIKASAAGPVWDSANFKCVQTMHSNLQQALKRGR--GTGGRESDRNAGGQLGSGDERMHWGQVSQNGENKNRKKVAASLSALATSRGVTDFFLFEGETNRLLVCRGTDLDLYDNGRAGEKDVTDSNQTIDVIYHSRTGTFASVSATGVKLWDARTGRLTRAYGVPPRPTRRSLPSGGRWVKPR----GRRGK--FSRGAVTGG------GGGRGGGI-VRHAEEITSACIDSRGHQMVMGFNTGRVACARYLTGNLVGQLDFHRGEVAHVADVWNDNCGALVLTASDATAWLQKMAADIAEPRRTIAVLDPQLEESRMRAAKQVVVGTVVDAFGLLKSMAVSAKVMKAKKTFLTALDTFHGRQ-----STVAAKSKSVAWSGISATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLLPETAAAPGTLRGQRGEXXXXXXXXXXXXXXXXXXKVIKEMGQGQSQVSSNQSSKSSSIDSHRGTPAAATAVLPGMPPRAAINKDAGVAGGGNVKGGGGVTRVRG-GAADDVGAG-TERSIEAAAGPLGGKAEMVRSAQPVPTAAPAAANAAAGQRVPTPPTGQTPLRRSSFLFHEKFARR 995
            GH+GQVLAM F A PFNVLVTSGEKDRM+RCWDM+LKP L AV   A  RQAKA EPQVMLKWLR   SGG D P           +   N   D S +LVSGGA GTVNIWQLT KHL IL +LPGHTGAVTSAC+LPH  V VTG+LDADIRVWA KTY+ KRVM                  XXXXXXXXXXXXXXXXXXX                                          DSANFKCVQT+HS+ QQ  + G    + GR               +M WG+ SQ+G      K  +  S      GV D FLFEGET+RLLVCRGT+LD +DNGRAGEKDVTDSNQTIDV+YHS TGTFASV++TG+KLWDARTGRLTR YGVPPRP   +  SGGRW K R    G  G   FSR     G      G GR  G+    AEEITSACIDSRGHQ+VMGFNTGRVACARYLTG LVGQLDFH GE                                       I VLDP LE  RM  + Q+V GTVV+    +K + V AK+++AKKTFLT L++F GR      +      ++ AWSG                                     + +T ++  TL  + G                      +  G+G       +S  +  ID+   T A+          R +  +    +G GN        R+ G G     GA  T+   E A    GGK E +RS + V   AP  A A  G   PTPP GQ P   SS LF++KFA+R
Sbjct:   29 GHSGQVLAMAFVAAPFNVLVTSGEKDRMLRCWDMILKPKLDAVVGPAGKRQAKACEPQVMLKWLRSLRSGGVDPPRSXXXXXXXXXDSKGNGAADVSAILVSGGAGGTVNIWQLTAKHLEILNTLPGHTGAVTSACVLPHPEVFVTGSLDADIRVWATKTYKFKRVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXDSANFKCVQTIHSHRQQEKRPGAPSSSAGRXXXXXX---XXXXXXKMQWGKASQDG---GEAKTKSKASLAPGGCGVVDLFLFEGETSRLLVCRGTELDFHDNGRAGEKDVTDSNQTIDVMYHSETGTFASVASTGIKLWDARTGRLTRVYGVPPRPA--TFSSGGRWAKRRRAGLGAAGGVGFSRVVDVNGDCGDAEGTGRFRGVEAGEAEEITSACIDSRGHQIVMGFNTGRVACARYLTGRLVGQLDFHPGE---------------------------------------IMVLDPALEAIRMERSNQIVEGTVVNVASAVKQLMVGAKILRAKKTFLTTLESFRGRNWRSDSNRGGTAGEATAWSGAPTITT-------------------------------VTDTNSSTSTLLTREGGGTGMPSGVSSNMGGQPPGGGGQ--GEGGRATLRGKSDSNMFIDNDNSTSASGN-------DRTSERQIVARSGKGNHGNNAKSVRIAGVGGVIAEGADFTDEDREVAQQAGGGKVEELRSPRAV-AEAPTGAAATVGGMTPTPPVGQKPRPSSSSLFNKKFAKR 769          
BLAST of mRNA_P-fluviatile_contig8.14529.1 vs. uniprot
Match: A0A6H5KFW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW1_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 4.540e-120
Identity = 346/831 (41.64%), Postives = 409/831 (49.22%), Query Frame = 0
Query:  222 MVLKPSLAAV---ATSRQAKAAEPQVMLKWLRPPTSGGGDHPPGSSGGVGGVGER--NDFEDASDVLVSGGASGTVNIWQLTLKHLVILKSLPGHTGAVTSACILPH-HVIVTGALDADIRV------WANKTYQCKRVMKGHARGVVTIEYNPSQRIXXXXXXXXXXXXXXXXXXXVICRLSGHVCSLVAARASVFSSDVISMSMDGIIKASAAGPVWDSANFKCVQTMHSNLQQALKRGRGTGGRESDRNAGGQLGSGDE---RMHWGQVSQNGENKNRKKVAASLSALATSRGVTDFFLFEGETNRLLVCRGTDLDLYDNGRAGEKDVTDSNQTIDVIYHSRTGTFASVSATGVKLWDARTGRLTRAYGVPPRPTRRSLPSGGRWVK------PRGRRG--KFSRGAVTGGGGGRGG---GIVRH-------AEEITSACIDSRGHQMVMGFNTGRVACARYLTGNLVGQLDFHRGEVAHVADVWNDNCGALVLTASDATAWLQKMAADIAEPRRTIAVLDPQLEESRMRAAKQVVVGTVVDAFGLLKSMAVSAKVMKAKKTFLTALDTFHGRQ-----STVAAKSKSVAWSGISATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLLPETAAAPGTLRGQRGEXXXXXXXXXXXXXXXXXXKVIKEMGQGQSQVSSNQSSKSSSIDSHRGTPAAATAVLPGMPPRAA-INKDAGVAGGGNVKG--------------GGGVTRVR----GGAADDVGAGTERSIEAAAGPLGGKAEMVRSAQPVPTAAPAAANAAAGQRVPTPPTGQTPLRRSSFLFHEKFARR 995
            M+LKP L AV   A  RQAKA EPQVMLKWLR P SGG D P GS GG     +   N   D S +LVSGGA GTVNIWQLT KHL IL +LPGHTGAVTSAC+LPH  V VTG+LDADIRV      +  +  Q  RVMKGH+RGVVTI+Y+P+QR+                   VICRLSGH CSLVAAR S  SSDVIS+SMDGIIK      VWDSANFKCVQT+ S+ QQ  +     G   S    GG+         +M  G+ SQ+         A+         GV D FLFEGET+RLLVCRGT+LD +DNGRAGEKDVTDSNQ  ++   + T    S  +   +L+        RA G       R+ P  G+           G  G   FSR     G GG GG   G  R+       AEEITSACIDSRGHQ+VMGFNTGRVACARYLTG LVGQLDFH GEV  VA VWND CG  +L A   +   +K                 Q    R RA KQ++VG               AK+++AKKTFLT L++F G       S      ++ AWSG                                     + +T ++  TL  + G                             S VSSN   + +     RG      A  PG   R   I+ D   +G GN K               G     VR    GGA  +    TE   E      GGK E +RS + V   APAAA+A  G   PTPP GQ P   SS LF++KFA+R
Sbjct:    1 MILKPKLDAVVGPAGKRQAKACEPQVMLKWLRSPPSGGVDPPRGSGGGSXXXXDSKGNGAADVSAILVSGGAGGTVNIWQLTAKHLDILNTLPGHTGAVTSACVLPHPEVFVTGSLDADIRVTYKAVRYWRRAAQFTRVMKGHSRGVVTIDYSPTQRVIVSAGFDHDILVWSPVAGQVICRLSGHGCSLVAARVSAVSSDVISVSMDGIIK------VWDSANFKCVQTIRSHRQQEKR----PGASWSSAGRGGEXXXXXXXXXKMQRGKASQDXXXXXXXXKASFAPG---GDGVVDLFLFEGETSRLLVCRGTELDFHDNGRAGEKDVTDSNQVTELTAITPTSFLHSFESVP-RLFLMTNNNNGRAGGR----AARTFPVAGKQSSIDSCQSGLGAAGGVDFSRVVDVIGDGGDGGDAEGTGRYRLVEAGEAEEITSACIDSRGHQIVMGFNTGRVACARYLTGRLVGQLDFHPGEVTDVAGVWNDACG--LLAAGSESPLFEKQ----------------QNLSFRRRAVKQLMVG---------------AKILRAKKTFLTTLESFRGPNWRSDPSRGGTAGEAAAWSGAPTITT-------------------------------VTDTNSSTSTLLTREGGGTDTP-----------------------SGVSSNMGGQPTG---GRGQGQGGRARQPGKSDRKIFIDDDDSNSGFGNDKTSERQIAARSGKGNHGNNARSVRIAGVGGAIAEDADFTEEDREVTQQAGGGKVEELRSPRAV-AEAPAAASATVGGMTPTPPAGQRPRPSSSSLFNKKFAKR 722          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G633_ECTSI4.750e-13944.43WD40 domain containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KFW1_9PHAE4.540e-12041.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 530..567
e-value: 400.0
score: 0.6
coord: 181..221
e-value: 0.084
score: 22.0
coord: 342..381
e-value: 9.3E-6
score: 35.1
coord: 301..339
e-value: 4.5E-5
score: 32.9
coord: 242..296
e-value: 350.0
score: 0.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 305..338
e-value: 0.23
score: 12.4
coord: 344..381
e-value: 0.0045
score: 17.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 349..381
score: 12.48
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 308..338
score: 10.275
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 188..222
score: 10.776
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 340..450
e-value: 1.2E-12
score: 49.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 172..339
e-value: 9.7E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 279..439
coord: 188..440
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 188..420
score: 21.542
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 279..695

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2352294..2370337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14529.1mRNA_P-fluviatile_contig8.14529.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 2352294..2373615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14529.1 ID=prot_P-fluviatile_contig8.14529.1|Name=mRNA_P-fluviatile_contig8.14529.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=995bp
MAGLPSPAVDSPAAVSGDGSGGAEEAGASSGGQVVPTATSDGNPSHLNKR
TAFSKRSSWSSVPRPPPACARSKWAASSPPQQQQLVSLFGRLFDFVSLQH
GDWTTWDELSTFLLFDGDTQGGQGGPRPYVHAGTRHLPKASLESAIVFKV
SRVGQDEDVAALLIRNSPAFMVISLDDLASSAAAPVRVKGHAGQVLAMTF
APPFNVLVTSGEKDRMVRCWDMVLKPSLAAVATSRQAKAAEPQVMLKWLR
PPTSGGGDHPPGSSGGVGGVGERNDFEDASDVLVSGGASGTVNIWQLTLK
HLVILKSLPGHTGAVTSACILPHHVIVTGALDADIRVWANKTYQCKRVMK
GHARGVVTIEYNPSQRIIVSAGFDHDILVWSPVAGQVICRLSGHVCSLVA
ARASVFSSDVISMSMDGIIKASAAGPVWDSANFKCVQTMHSNLQQALKRG
RGTGGRESDRNAGGQLGSGDERMHWGQVSQNGENKNRKKVAASLSALATS
RGVTDFFLFEGETNRLLVCRGTDLDLYDNGRAGEKDVTDSNQTIDVIYHS
RTGTFASVSATGVKLWDARTGRLTRAYGVPPRPTRRSLPSGGRWVKPRGR
RGKFSRGAVTGGGGGRGGGIVRHAEEITSACIDSRGHQMVMGFNTGRVAC
ARYLTGNLVGQLDFHRGEVAHVADVWNDNCGALVLTASDATAWLQKMAAD
IAEPRRTIAVLDPQLEESRMRAAKQVVVGTVVDAFGLLKSMAVSAKVMKA
KKTFLTALDTFHGRQSTVAAKSKSVAWSGISATTTTAAEDEAVQRSTLLL
REVTKGGGETTPPPWLLPETAAAPGTLRGQRGEGGGEGARGGGGGGGGGG
GKVIKEMGQGQSQVSSNQSSKSSSIDSHRGTPAAATAVLPGMPPRAAINK
DAGVAGGGNVKGGGGVTRVRGGAADDVGAGTERSIEAAAGPLGGKAEMVR
SAQPVPTAAPAAANAAAGQRVPTPPTGQTPLRRSSFLFHEKFARR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf