prot_P-fluviatile_contig78.14235.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig78.14235.1
Unique Nameprot_P-fluviatile_contig78.14235.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length204
Homology
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 1.740e-99
Identity = 162/206 (78.64%), Postives = 177/206 (85.92%), Query Frame = 0
Query:    1 MKTFAACTMALMALDSTSAFTAPLSTLSGAATSIARASSAVSMSAVGDEAVSRKNAIAAFSAGAAFLFSATAVPAVVFAAEDAAAPAAVA---EGPPTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            MKTFAACT+AL+A D  +AFT PL+  +GA +     SS+    +VGDEA+SRKNAIAAFSAGAA +  A AVPA VFAAE+AAAPA  A   +GPP+DWGLTKQYYPDA+KMVRHMRYCTNMEKG+P MADIA NCKKEMVEFVSNYRRS NINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR
Sbjct:    1 MKTFAACTIALVAGDLAAAFTGPLAARTGATSXXXXXSSSAVCMSVGDEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPSDWGLTKQYYPDASKMVRHMRYCTNMEKGDPYMADIANNCKKEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.620e-53
Identity = 88/136 (64.71%), Postives = 109/136 (80.15%), Query Frame = 0
Query:   69 SATAVPAVVFAAEDAAAPAAVAEGP-PTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            +A   PA+  AA+   A   V  GP P DWGLTK YY DA+K+V HMRY T+MEKG  N+ ++A NC++EM++FVS YRR  N++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL++EY+ I++AIKRQR
Sbjct:   49 AAAVAPALAIAADGTPAVEKVPLGPMPVDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.660e-53
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 0
Query:   37 ASSAVSMSAVGDEAVSRKNAIAAFSAGAAFLFSATAVPAVVFAAEDAAAPAAVAEGP-PTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            A+SAV MS+   + V R+  +++ +A A  + SA   PA    AEDAA PA    GP PTDWGLTK YY DA+K+V HMRY T++EKG   +   A NC++EM++FVS YRR  N++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRLL+EY  IE+AIKRQR
Sbjct:   34 ATSAVRMSSEASD-VDRRAFLSSTAAAAMTVASAFVAPAF---AEDAA-PAKAPLGPMPTDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.350e-49
Identity = 83/131 (63.36%), Postives = 100/131 (76.34%), Query Frame = 0
Query:   78 FAAEDAAAPAAVAEGP-----PTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            FA +  AAP A AE P     P DWG+T  YY DAAK+V HMR  T++EKG PNM  IA NCKKEM++FVS YRR  N++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY ++E+ IK++R
Sbjct:    4 FADDAPAAPPAEAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.160e-47
Identity = 81/125 (64.80%), Postives = 97/125 (77.60%), Query Frame = 0
Query:   80 AEDAAAPAAVAEGPP-TDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            A++ AAPA+   GPP TDWGL+ QYY DA ++V HMRY T M K  PN   IATNCKKEM++FVS YRR  N+ GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRLLQEY +IE+ IKR R
Sbjct:   84 ADEVAAPASTELGPPPTDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQEYAEIEKNIKRSR 208          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.510e-45
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
Query:   94 PTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            PTDWGLT +YY DA ++V HMRY T+M KG PN  +IA +CKKEM++FVS YRR  N+ GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL QEY +IE+ IKRQR
Sbjct:   95 PTDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQEYAEIEKNIKRQR 204          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.750e-45
Identity = 78/129 (60.47%), Postives = 100/129 (77.52%), Query Frame = 0
Query:   80 AEDAAAPAAVAEGP-----PTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            AE+A APAA    P     PTD+ +  +YYPDA  +V++MRY T M+KG PNM  I  + +K+MV+FV+ YRR++ +NG+LSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRLLQEY DIE+ +++ R
Sbjct:   90 AEEAVAPAAAPAKPDMGPVPTDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.230e-41
Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 0
Query:   84 AAPAAVAEGPPTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            A PA V    PT++G+T+ YY DAAK+V HMR  T+++KG+PN+  IA   KKEM  FV+ YRR   + GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY +IE+ IKR+R
Sbjct:   64 APPAPVVAELPTNYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.410e-40
Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = 0
Query:   93 PPTDWGLTKQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            PP ++ L+K+YY DAA++V HM+Y T M +  PN  +IA + K EM +FVS YRR +N+ GK S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL QE+T+I+R IKR R
Sbjct:   80 PPVNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190          
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Match: A0A7S2RL20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL20_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.710e-39
Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 0
Query:   71 TAVPAVVFAAEDAAAPAAVAEGP-------------------PTDWGLT-KQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 203
            TA+  V FA ++A APAA  E P                   P +WG+T K YY DA ++V HM+Y T MEKG  NM  I  N KKEMV+FVS YRR +N+ GK S+S LYT+I+VLAGHY SYG KFPVPEKRRKRL QEY +I++ IK+ R
Sbjct:   63 TAMAPVAFADDEAPAPAA--EAPVXXXXXXXXXXXSYGNFEVPKEWGITGKDYYYDAQRVVDHMKYATAMEKGTSNMDSINKNMKKEMVDFVSFYRRFNNVAGKQSFSTLYTAINVLAGHYTSYGTKFPVPEKRRKRLFQEYAEIDKYIKKSR 213          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig78.14235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI1.740e-9978.64Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836C8X1_9STRA2.620e-5364.71Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A836CEQ5_9STRA7.660e-5361.31Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3ZPN6_9STRA1.350e-4963.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U8B8_9STRA2.160e-4764.80Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XRA0_9STRA3.510e-4566.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UVY8_9STRA3.750e-4560.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3NKQ6_9STRA2.230e-4160.83Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TYA6_9STRA4.410e-4060.36Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A7S2RL20_9STRA1.710e-3953.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 61..199
e-value: 5.8E-28
score: 98.0
IPR025585Photosystem II Pbs27PANTHERPTHR34041FAMILY NOT NAMEDcoord: 22..203
IPR025585Photosystem II Pbs27HAMAPMF_01481PSII_Psb27coord: 63..199
score: 23.577
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810coord: 92..203
e-value: 2.5E-39
score: 135.7
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 22..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.639
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig78contigP-fluviatile_contig78:394688..400335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig78.14235.1mRNA_P-fluviatile_contig78.14235.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig78 394688..400335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig78.14235.1 ID=prot_P-fluviatile_contig78.14235.1|Name=mRNA_P-fluviatile_contig78.14235.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=204bp
MKTFAACTMALMALDSTSAFTAPLSTLSGAATSIARASSAVSMSAVGDEA
VSRKNAIAAFSAGAAFLFSATAVPAVVFAAEDAAAPAAVAEGPPTDWGLT
KQYYPDAAKMVRHMRYCTNMEKGNPNMADIATNCKKEMVEFVSNYRRSDN
INGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIK
RQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf