prot_P-fluviatile_contig78.14219.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig78.14219.1
Unique Name	prot_P-fluviatile_contig78.14219.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	224

Homology

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BLAST of mRNA_P-fluviatile_contig78.14219.1 vs. uniprot
Match: A0A6H5JNA9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNA9_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.880e-60
Identity = 120/190 (63.16%), Postives = 146/190 (76.84%), Query Frame = 0

Query:   37 PKLSKNPQLSLTGPLSIRSVEDVSDGEDEEFIGDAMPMTKHEEVEPILPLGVVAVVKEDEVKEVGSIVSLVEADGTIVIRGE-NPPFEEGCVLYSHVAQ--EQGQNTGVWEATGPLEPLGRIHEIFGPISIPHYTVRVEGAATQHQLAVRYQVALKKLLKEEKERADVKQAEAD-RIAQEVKDAEILTPA 222
            P+ +K+P L LTGPLSIR + DVSDGEDEEF+G A+PMTKHEE+EPILPLG V+     EV+EVG I+SLVEADGTIV++G+     +EGCVL S V +  E G+ +G  EATG  EPLGRIHEIFGP ++PHYTVRV+GAA QHQL VRYQVALKKLL+ EKERAD   A  + R+A+E + A +  PA
Sbjct:  176 PRRNKDPHLPLTGPLSIRPIGDVSDGEDEEFMGSALPMTKHEELEPILPLGEVSF-DGAEVQEVGKILSLVEADGTIVVQGKPGLVLDEGCVLASRVVEPKENGEPSG--EATGATEPLGRIHEIFGPCALPHYTVRVQGAAVQHQLVVRYQVALKKLLQMEKERADEHMAVIEKRVAEEAEAAALRDPA 362

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BLAST of mRNA_P-fluviatile_contig78.14219.1 vs. uniprot
Match: D8LTG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG9_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.150e-59
Identity = 117/190 (61.58%), Postives = 146/190 (76.84%), Query Frame = 0

Query:   37 PKLSKNPQLSLTGPLSIRSVEDVSDGEDEEFIGDAMPMTKHEEVEPILPLGVVAVVKEDEVKEVGSIVSLVEADGTIVIRGE-NPPFEEGCVLYSHVAQ--EQGQNTGVWEATGPLEPLGRIHEIFGPISIPHYTVRVEGAATQHQLAVRYQVALKKLLKEEKERADVKQAEAD-RIAQEVKDAEILTPA 222
            P+ +K+P L LTGPLSIR + DVSDGEDEEF+G A+PMTK+EE+EPILPLG V++    EV+EVG I+SLVEADGTIV++G+     +EGCVL S V +  E G+ +G  EATG  EPLGRIHEIFGP ++PHYTVRV+GAA QHQ+ VRYQVALKKLL+ EKERAD   A  + R+ +E + A +  PA
Sbjct:  177 PRRNKDPHLPLTGPLSIRPIGDVSDGEDEEFMGAALPMTKNEELEPILPLGEVSL-DGAEVQEVGKILSLVEADGTIVVQGKPGLVLDEGCVLASRVVEPKENGEPSG--EATGATEPLGRIHEIFGPCALPHYTVRVQGAAVQHQVVVRYQVALKKLLQMEKERADAHMAVIEKRVEEEAEAAALRDPA 363

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig78.14219.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig78.14219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JNA9_9PHAE	1.880e-60	63.16	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D8LTG9_ECTSI	2.150e-59	61.58	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..212
IPR038664	H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain	GENE3D	2.40.10.230		coord: 71..192 e-value: 3.6E-8 score: 35.1

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig78	contig	P-fluviatile_contig78:309226..312100 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig78.14219.1	mRNA_P-fluviatile_contig78.14219.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig78 309226..312879 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig78.14219.1 ID=prot_P-fluviatile_contig78.14219.1|Name=mRNA_P-fluviatile_contig78.14219.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=224bp
MTTPVTHQPVATQECFLAQGKPLPKCNRFPRSFCFQPKLSKNPQLSLTGP
LSIRSVEDVSDGEDEEFIGDAMPMTKHEEVEPILPLGVVAVVKEDEVKEV
GSIVSLVEADGTIVIRGENPPFEEGCVLYSHVAQEQGQNTGVWEATGPLE
PLGRIHEIFGPISIPHYTVRVEGAATQHQLAVRYQVALKKLLKEEKERAD
VKQAEADRIAQEVKDAEILTPAQA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038664	Gar1/Naf1_Cbf5-bd_sf