prot_P-fluviatile_contig78.14185.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig78.14185.1
Unique Nameprot_P-fluviatile_contig78.14185.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length292
Homology
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Match: Q8QNN8_ESV1K (EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN8_ESV1K)

HSP 1 Score: 407 bits (1046), Expect = 3.000e-136
Identity = 206/278 (74.10%), Postives = 240/278 (86.33%), Query Frame = 0
Query:   15 LNPTRSTIDDRVETAKARVRGREQAKDKQNQCNVMEFMKSVADPSKNKQGKYADTKGLLVAHGMGSGKTLTSLWVAKEYIARNRVNFVNILAPNVAVGEFIDSFERAGITPQMAGKIRVLMHDEFFLNRRGREFTQSLVIVDKAHC-NGLSLGSLYKSDVRYIMLLSGTPAPNTPSEIVPLINLLCRKKEERWTTKKWDNPATTTRAKQGFLQNKVSIYNIGPKYNYLRERGTEFPSADNFPGYRVSTRSVKLSSSQNAEYIQLNKKVKKESQREREK 291
            LNPTRST+D RV+TA+ R +GR Q   K+NQCNV+EFMK VADP++NK+ KYA+TKGLL+AHGMGSGKTLTSLWVAKEYIA+NRV FVNILAPNVAVGEFIDSFERAGITPQ AGKIRVL HDEF LN++ REF++SLVIVD+AH   G+   +L K+DV Y+MLLSGTPAPN PSEIVPLINLL RK+E+ WT +KWD   TT   K+ FL++KVS+YNIGPKYNYLR+RGTEFPSA+NFPGY+VSTR+VKLS SQNA Y++LNK VKKES  EREK
Sbjct:  108 LNPTRSTVDARVDTARTRAQGRNQETQKKNQCNVIEFMKRVADPTRNKEEKYANTKGLLIAHGMGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQTAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGMKYDALAKADVSYLMLLSGTPAPNAPSEIVPLINLLHRKREDHWTRQKWDKSTTTPSEKKKFLRDKVSMYNIGPKYNYLRQRGTEFPSANNFPGYKVSTRNVKLSPSQNAAYMKLNKTVKKESPGEREK 385          
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Match: D8LP58_ECTSI (Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP58_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 1.770e-134
Identity = 203/278 (73.02%), Postives = 241/278 (86.69%), Query Frame = 0
Query:   15 LNPTRSTIDDRVETAKARVRGREQAKDKQNQCNVMEFMKSVADPSKNKQGKYADTKGLLVAHGMGSGKTLTSLWVAKEYIARNRVNFVNILAPNVAVGEFIDSFERAGITPQMAGKIRVLMHDEFFLNRRGREFTQSLVIVDKAHC-NGLSLGSLYKSDVRYIMLLSGTPAPNTPSEIVPLINLLCRKKEERWTTKKWDNPATTTRAKQGFLQNKVSIYNIGPKYNYLRERGTEFPSADNFPGYRVSTRSVKLSSSQNAEYIQLNKKVKKESQREREK 291
            LNPTRST+DDRV+TA+ R  GR+Q  +K+NQCNV+EFMK VADP+KNK+ +YA+TKGLL+AHGMGSGKTLTSLWVAKEYIA+NRV FVNILAPNVAVGEFIDSFERAGITPQ+AGKIRVL HDEF LN++ REF++SLVIVD+AH   G+   +L K+DV Y+MLLSGTPAPN PSEIVPLINLL RKK++ WT +KWD   TT+  K+ FL++KVS+YNIGPKYNYLR+RGTEF SA+ FPGY+VS R+VKLS SQNA Y++LNK VKKES  +REK
Sbjct:  108 LNPTRSTVDDRVDTARTRALGRKQETEKRNQCNVIEFMKRVADPTKNKEKQYANTKGLLIAHGMGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKADVSYLMLLSGTPAPNAPSEIVPLINLLYRKKKDNWTKQKWDKSTTTSSEKKKFLRDKVSMYNIGPKYNYLRKRGTEFHSANKFPGYKVSMRNVKLSPSQNAAYVKLNKTVKKESPGQREK 385          
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Match: A0A6H5JDR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR8_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.590e-52
Identity = 106/185 (57.30%), Postives = 130/185 (70.27%), Query Frame = 0
Query:   13 LGLNPTRSTIDDRVETAKARVRGREQAKDKQNQCNVMEFMKSVADPSKNKQGKYADTKGLLVAHGMGSGKTLTSLWVAKEYIARNRVNFVNILAPNVAVGEFIDSFERAGITPQMAGKIRVLMHDEFFLNRRGREFTQSLVIVDKAHC-NGLSLGSLYKSDVRYIMLLSGTPAPNTPSEIVPLIN 196
            +GL+PTRST DDRVE+A  R RGR+Q  DK+ +CNV++FMK VAD +KN++  YA+TK                           +V FVNILA NVAVGE I+SFERAGITPQ+AGKIRVL HD F LNR+ R+F++SLVIVD+AH    +   +L K+DV Y+MLLSGTPAPN PSEIVPLIN
Sbjct:  473 VGLDPTRSTFDDRVESANTRARGRKQETDKKKKCNVIDFMKRVADLTKNEEKIYANTK---------------------------KVKFVNILASNVAVGELINSFERAGITPQIAGKIRVLTHDGFALNRKARKFSRSLVIVDEAHMFTAIKYDALAKADVSYLMLLSGTPAPNVPSEIVPLIN 630          
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Match: A0A5J6VJP7_9VIRU (SNF2 family N-terminal domain protein n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VJP7_9VIRU)

HSP 1 Score: 60.5 bits (145), Expect = 1.120e-6
Identity = 45/142 (31.69%), Postives = 77/142 (54.23%), Query Frame = 0
Query:   66 YADTKGLLVAHGMGSGKTLTSLWVAKEYIARNRVNF-VNILAPNVAVGEFIDSFERAGITPQMAGKIRVLMHDEFFLNRRGREFTQSLVIVDKAHCNGLSLGSLYKSDV-----RY---IMLLSGTPAPNTPSEIVPLINLL 198
            +  T+GL++ HGMGSGKTLTS+  A++ + +N+ N  +++  P   V  +     +A        K  ++ HD++ +      ++  L+IVD+AH   L   +  KS V     RY   ++LL+GTP  N PS+   L+N++
Sbjct:   15 FRKTRGLILNHGMGSGKTLTSIACAEDAM-KNKPNLQIHVAVPAKLVSNYEKELAKANAN---TSKYIIMSHDKY-IKWIQPPYSNILLIVDEAHI--LRNATTEKSKVFFKVARYCYKVLLLTGTPLVNYPSDASHLLNMI 149          
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Match: A0A1Y1IQ76_KLENI (Chromodomain helicase DNA binding protein 8 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQ76_KLENI)

HSP 1 Score: 57.4 bits (137), Expect = 1.360e-5
Identity = 39/137 (28.47%), Postives = 65/137 (47.45%), Query Frame = 0
Query:   70 KGLLVAHGMGSGKTLTSLWVAKEYIARNRVNFVNILAPNVAVGEFIDSFERAGITPQMAGKIRVLMHDEFFLNRRGREFT--QSLVIVDKAHCNGLSLGSLYKS------DVRYIMLLSGTPAPNTPSEIVPLINLL 198
            +GL++  G+GSGKTL+S+  A+  +    V  + ++ P   +  +     +       A K  V+  + F     G  F     L++VD+AH    + G   K+          ++LL+GTP  N PS+I PL N+L
Sbjct:  254 RGLILYFGVGSGKTLSSMAAAEALMNHGIVKSIVVVTPASLIANYKKELSKFHAK---ADKYNVMSFENFTKKAEGGTFLTKDKLLVVDEAHNLRNAAGQRSKAIFAQAKGATKVLLLTGTPVQNAPSDIAPLANML 387          
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Match: A0A6C0F7I3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F7I3_9ZZZZ)

HSP 1 Score: 55.8 bits (133), Expect = 3.690e-5
Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 0
Query:   68 DTKGLLVAHGMGSGKTLTSLWVA----KEYI----ARNRVNFVNILAPNVAVGE--FIDSFERAGITPQMAGKIRVLMHDEFF-LNRRGREFTQSLVIVDKAHCNGLSLGSLYKSDVRYIMLLSGTPAPNTPSEIVPLINLLCR---------KKEERW---TTKKWDNPATTTRAKQGFLQNKVSIYNIGPKYNYLRERGT-----EFPSADNFPGYRVSTRSVKLSSSQ 270
            D+KGLLV HG+GSGKTLTS+ +A    KE I    A  + N+   +A   A  +   I SFE +  T ++  K +VL+ DE   L    R+ T++++   K                  I+LL+GTP  N P++I  LIN++ R         K E+ +   TTK  + P           Q  + + +I  +  Y+++ G      E  ++ N+P   V  + V +S+ Q
Sbjct:   24 DSKGLLVFHGLGSGKTLTSIAMAHNSDKEVIVIVPASLKDNYKKEIAKFGANKKKFTIMSFEMSAKT-KLQLKNKVLVVDEAHRLRNTNRKDTKNIIDASKK--------------AEKIILLTGTPFVNRPNDIASLINIIARENVFPTNKDKFEQEYIEVTTKVVNVPYKVFGLTIYQNQQTIQVADIKNRKEYIKKLGNYVSFYENKNSSNYPSKTVYYKPVVMSAEQ 239          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig78.14185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Q8QNN8_ESV1K3.000e-13674.10EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP58_ECTSI1.770e-13473.02Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JDR8_9PHAE1.590e-5257.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5J6VJP7_9VIRU1.120e-631.69SNF2 family N-terminal domain protein n=1 Tax=Mega... [more]
A0A1Y1IQ76_KLENI1.360e-528.47Chromodomain helicase DNA binding protein 8 n=1 Ta... [more]
A0A6C0F7I3_9ZZZZ3.690e-529.44Uncharacterized protein n=1 Tax=viral metagenome T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..291
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 59..232
e-value: 5.6E-7
score: 30.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 63..201
score: 11.339
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 68..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig78contigP-fluviatile_contig78:15982..37376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig78.14185.1mRNA_P-fluviatile_contig78.14185.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig78 15793..38072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig78.14185.1 ID=prot_P-fluviatile_contig78.14185.1|Name=mRNA_P-fluviatile_contig78.14185.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=292bp
MRVSSSNAKKKKLGLNPTRSTIDDRVETAKARVRGREQAKDKQNQCNVME
FMKSVADPSKNKQGKYADTKGLLVAHGMGSGKTLTSLWVAKEYIARNRVN
FVNILAPNVAVGEFIDSFERAGITPQMAGKIRVLMHDEFFLNRRGREFTQ
SLVIVDKAHCNGLSLGSLYKSDVRYIMLLSGTPAPNTPSEIVPLINLLCR
KKEERWTTKKWDNPATTTRAKQGFLQNKVSIYNIGPKYNYLRERGTEFPS
ADNFPGYRVSTRSVKLSSSQNAEYIQLNKKVKKESQREREK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase