prot_P-fluviatile_contig77.14155.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig77.14155.1
Unique Nameprot_P-fluviatile_contig77.14155.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length773
Homology
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BLAST of mRNA_P-fluviatile_contig77.14155.1 vs. uniprot
Match: D7FHW4_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW4_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 3.180e-47
Identity = 93/104 (89.42%), Postives = 99/104 (95.19%), Query Frame = 0 
Query:  640 VFHDLKARRNCSANIHSYTPLVDALTRSLRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERAGQYDVALRLLDEMRKKRMRFYEISILDELFKRLLAGLSLLR 743
            +F+ L+ARRNCS  IHSYTPLVDALTR LRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACER+GQYDVALRLLD+MRKKRMRFY+I ILDELFKRLLAGLSLLR
Sbjct:  527 LFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERSGQYDVALRLLDDMRKKRMRFYDIGILDELFKRLLAGLSLLR 630
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BLAST of mRNA_P-fluviatile_contig77.14155.1 vs. uniprot
Match: A0A6H5LDR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDR5_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.370e-43
Identity = 152/216 (70.37%), Postives = 156/216 (72.22%), Query Frame = 0 
Query:   50 AFAGSSLWATSDLEWRDAPRAGSDALYELNMQLAAYAKDAQWEMAIMLLRQARALWKIGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSLDRAIAXXXXXXXXXXXGDTLGSFSQPFVA-----EGWAQAVPVAEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPXXXXXXXXXXXXAKRGNWEDSVNYLEHMR 260
            AF G SLWA SD EWRDAPRA SDAL+ELNMQLAAYAKDAQWEMAIMLLRQAR L +  S XXXXXXXXXXXXXXXXXXXXXXXXXXX                     A            D L S S P+ +     E W  AVP  EPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIR XXXXXXXXXXXXAKRGNWEDSVNYLE MR
Sbjct:  159 AFTGPSLWADSDPEWRDAPRADSDALFELNMQLAAYAKDAQWEMAIMLLRQARVLSRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGND------------------AAKRRYGVHPGGNDNL-SVSVPYTSAAEKEEEWRLAVPAVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRXXXXXXXXXXXXXAKRGNWEDSVNYLEQMR 355
[Close]
BLAST of mRNA_P-fluviatile_contig77.14155.1 vs. uniprot
Match: A0A7S3Y1A4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1A4_HETAK)

HSP 1 Score: 73.6 bits (179), Expect = 9.700e-10
Identity = 33/94 (35.11%), Postives = 61/94 (64.89%), Query Frame = 0 
Query:  647 RRNCSANIHSYTPLVDALTRSLRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERAGQYDVALRLLDEMRKKRMRFYEISILDELFKRLLAGLS 740
            RR+ + +  SY  +V+A  R+  W+ ++ L ++M+  ++ P +  +T V+ ACE+  ++  AL L+++MR+    FYE+ +LD LFKRL+A L+
Sbjct:  561 RRSPAPSARSYGIVVEAFARAGDWETSMSLLKQMQKSRLRPDISTFTEVITACEKGRRWKAALDLMEDMRQMGYDFYEVPLLDSLFKRLVAALA 654
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHW4_ECTSI3.180e-4789.42PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5LDR5_9PHAE1.370e-4370.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Y1A4_HETAK9.700e-1035.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 194..246
e-value: 6.9E-14
score: 51.7
coord: 465..524
e-value: 6.4E-12
score: 45.4
coord: 534..593
e-value: 3.0E-10
score: 40.0
coord: 676..720
e-value: 5.4E-6
score: 26.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 269..299
e-value: 4.6E-5
score: 23.4
coord: 375..404
e-value: 0.038
score: 14.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 301..345
e-value: 1.6E-12
score: 47.4
coord: 406..450
e-value: 1.4E-8
score: 34.8
coord: 616..665
e-value: 7.7E-9
score: 35.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 269..301
e-value: 1.7E-5
score: 22.7
coord: 585..618
e-value: 2.1E-6
score: 25.6
coord: 304..337
e-value: 3.7E-11
score: 40.5
coord: 549..583
e-value: 7.0E-4
score: 17.6
coord: 480..513
e-value: 1.1E-6
score: 26.4
coord: 620..653
e-value: 1.2E-5
score: 23.1
coord: 691..719
e-value: 3.2E-5
score: 21.8
coord: 374..407
e-value: 9.9E-4
score: 17.1
coord: 444..478
e-value: 3.1E-4
score: 18.7
coord: 234..268
e-value: 2.6E-7
score: 28.4
coord: 198..233
e-value: 7.5E-5
score: 20.6
coord: 655..688
e-value: 4.1E-5
score: 21.5
coord: 409..443
e-value: 0.0017
score: 16.4
coord: 514..547
e-value: 5.2E-7
score: 27.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 11.268
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 12.88
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 688..722
score: 10.205
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 547..581
score: 10.052
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 12.584
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 477..511
score: 11.575
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 617..651
score: 9.087
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 11.619
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 512..546
score: 11.422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..406
score: 9.306
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..371
score: 8.429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 653..687
score: 10.874
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..231
score: 10.106
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 10.172
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..476
score: 9.778
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 187..331
e-value: 1.3E-43
score: 151.5
coord: 459..613
e-value: 6.3E-48
score: 165.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 628..738
e-value: 1.5E-23
score: 85.1
coord: 345..458
e-value: 3.1E-25
score: 90.6
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 296..417
coord: 521..726
coord: 403..531
coord: 195..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig77contigP-fluviatile_contig77:288502..299385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig77.14155.1mRNA_P-fluviatile_contig77.14155.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig77 288245..300919 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig77.14155.1 ID=prot_P-fluviatile_contig77.14155.1|Name=mRNA_P-fluviatile_contig77.14155.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=773bp
MQRKSTEGVQQQQQQQHHQRNGGTTGTSWRAAAANENEEEWVADSGGGGA
FAGSSLWATSDLEWRDAPRAGSDALYELNMQLAAYAKDAQWEMAIMLLRQ
ARALWKIGSSSSSSSRQGGEAGGGVEGARAAVGAAAAAVEEKENESDEEG
ENSLDRAIAAGGRSISGGGGGDTLGSFSQPFVAEGWAQAVPVAEPNVVSY
NNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWE
DSVNYLEHMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRKDGIL
PVTVTYNTVISACGKSGQWSMAVSLLDEMTEMGCPPDQVTFASAMLACER
AKQWQNVIRIMDQMQEDGVWVDKYAYTTAIHAAARLGKWARCVRYLEEMD
ANGVEKDVVTVSAAISACSEKSQWAQAEKLLSDMLADGLTPNVITYTSLM
VVLRRGRQHQKSIGILELMKSEGVRPNVRSYTVAIAACADSKDWRKALAL
MKEMEREGVPPNVITYNTAIRACGVAGQLSGALSLMDEMESKGLKASVVT
YGTAVAACQRQADWKMALELLAAMRRENIEPNEIVYGGIIKACCAAGQAD
KALELLSRMMDLRLRPNTQCFNVVIKALVDAGQVEEALAVFHDLKARRNC
SANIHSYTPLVDALTRSLRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACE
RAGQYDVALRLLDEMRKKRMRFYEISILDELFKRLLAGLSLLRRPRVGGG
SGAARPKPPPPPSEGDAGGGET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf