prot_P-fluviatile_contig76.14120.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig76.14120.1
Unique Nameprot_P-fluviatile_contig76.14120.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length111
Homology
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BLAST of mRNA_P-fluviatile_contig76.14120.1 vs. uniprot
Match: A0A6H5L715_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L715_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.540e-14
Identity = 49/90 (54.44%), Postives = 54/90 (60.00%), Query Frame = 0 
Query:   19 RVESSSLADSGLNSRVSAINRSSVPAVNFDSIRIESGTFGSQSFVPGTGSGXXXXXXXXPPPPTAASKWLGNVASGNPLIAGAGISDTGE 108
            RV SS L DSGL   VS ++RSSV A NF SI I SG  GSQSF P              PP   +S+W G+ ASGN LI GAGISDTGE
Sbjct:  113 RVGSSGLLDSGLTPDVSTVHRSSVGAANFGSIGIGSGAPGSQSFFP--------------PPSAPSSEWWGHAASGNTLIPGAGISDTGE 188
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BLAST of mRNA_P-fluviatile_contig76.14120.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.350e-13
Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:   23 SSLADSGLNSRVSAINRSSVPAVNFDSIRIESGTFGSQSFVPGTGSGXXXXXXXXPPPPTAASKWLGNVASGNPLIAGAGISDTGE 108
            SS+A++GLNS  +A+NRSS    +F S+ + S   GSQSF+PG    XXXXXXXX P PTA+S+W  NVASG  LI GAGI++ GE
Sbjct:    8 SSVANTGLNSHDTAVNRSSAGVTSFGSVGMGSRALGSQSFIPGXXXXXXXXXXXXXPAPTASSRWWENVASGTTLIPGAGITEPGE 93
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L715_9PHAE1.540e-1454.44CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2M6_9PHAE3.350e-1356.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:534317..534649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14120.1mRNA_P-fluviatile_contig76.14120.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig76 534317..534795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig76.14120.1 ID=prot_P-fluviatile_contig76.14120.1|Name=mRNA_P-fluviatile_contig76.14120.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=111bp
WDSGRYGWRCPRPWRVQQRVESSSLADSGLNSRVSAINRSSVPAVNFDSI
RIESGTFGSQSFVPGTGSGDFGSQSSVPPPPTAASKWLGNVASGNPLIAG
AGISDTGEFS*
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