prot_P-fluviatile_contig76.14107.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig76.14107.1
Unique Nameprot_P-fluviatile_contig76.14107.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length80
Homology
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: D8LNY9_ECTSI (DNA repair helicase rad5,16, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY9_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 6.320e-31
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 LRRKRPGGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNL 78
            +R+K PG KAVVFSQ   WTHMLDL E  ++RGG++FRRLDG+MSQQ+RESALK F TD SV VMLVSLKAGGVGLNL
Sbjct:    1 MRKKTPGAKAVVFSQ---WTHMLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNL 75          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.500e-28
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 LRRKRPGGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLTA 80
            +R+K PG KAVVFSQ   WTHMLDL E  ++RGG++FRRLDG+MSQQ+RESALK F TD SV VMLVSLKAGGVGLNLTA
Sbjct: 1457 MRKKTPGAKAVVFSQ---WTHMLDLAEASIARGGWTFRRLDGAMSQQQRESALKGFATDESVTVMLVSLKAGGVGLNLTA 1533          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A6V1XFX6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XFX6_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 1.250e-20
Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    6 PGGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLT 79
            P  KAVVFSQ   WT+MLDLVE  L R G+   RLDGSMSQQ+RE AL+ F T++ + VML+SLKAGGVGLNLT
Sbjct:   39 PARKAVVFSQ---WTYMLDLVEVLLRRMGWRHTRLDGSMSQQQREDALERFATETDIPVMLLSLKAGGVGLNLT 109          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A0L0H763_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H763_SPIPD)

HSP 1 Score: 87.4 bits (215), Expect = 2.570e-18
Identity = 49/71 (69.01%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    9 KAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLT 79
            KAVVFSQ   WT+MLDL+E  L   GF F RLDG MS+Q R  A++SF+TD SV VMLVSLKAGGVGLNLT
Sbjct: 1105 KAVVFSQ---WTNMLDLLEPSLRTYGFGFVRLDGKMSRQDRTDAMESFKTDPSVTVMLVSLKAGGVGLNLT 1172          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A7S3ZFV6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFV6_9EUKA)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-17
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    7 GGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNL 78
            G K+VVFSQ   WTHMLDL+E  L+  GF + RLDGSM++++RE  L  F  D+   V+L+SLKAGGVGLNL
Sbjct:   30 GHKSVVFSQ---WTHMLDLIEPALTEKGFKYVRLDGSMNRKQREKVLDQFRGDAETEVILISLKAGGVGLNL 98          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: SM3L2_ARATH (DNA repair protein RAD5A n=19 Tax=Brassicaceae TaxID=3700 RepID=SM3L2_ARATH)

HSP 1 Score: 85.1 bits (209), Expect = 1.650e-17
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    7 GGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLTA 80
            G K+++FSQ   WT  LDL++  LSR  FSF RLDG++SQQ+RE  LK F  D S+ V+L+SLKAGGVG+NLTA
Sbjct:  879 GSKSILFSQ---WTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTA 949          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A388LEU3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LEU3_CHABU)

HSP 1 Score: 84.7 bits (208), Expect = 2.270e-17
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    4 KRPGGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLTA 80
            ++ G K++VFSQ   WT  LDL+E  L R  FSF RLDGS+SQ  RE A++ F T+  V VML+SLKAGGVG+NLTA
Sbjct: 1237 RQTGAKSIVFSQ---WTAFLDLLEIPLKRKKFSFVRLDGSLSQHNREKAIRDFSTNPDVTVMLISLKAGGVGINLTA 1310          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: UPI00192EDC85 (DNA repair protein RAD5A-like n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EDC85)

HSP 1 Score: 79.0 bits (193), Expect = 2.890e-17
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    4 KRPGGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLTA 80
            K  G K++VFSQ   WT  LDL++  LSR    F RLDGS+SQQ+RE+ +K F  D+ + V+L+SLKAGGVG+NL A
Sbjct:    4 KSSGSKSIVFSQ---WTAFLDLLQIPLSRNKIPFVRLDGSLSQQQRENVIKRFSEDNDILVLLMSLKAGGVGVNLIA 77          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A0K9RQK1_SPIOL (Uncharacterized protein n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RQK1_SPIOL)

HSP 1 Score: 84.3 bits (207), Expect = 3.080e-17
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    7 GGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLTA 80
            G K++VFSQ   WT  LDL+E  L+R   SF RLDG++SQQ+RE  LK F  DS V V+L+SLKAGGVG+NLTA
Sbjct:  880 GSKSIVFSQ---WTAFLDLLEIPLTRNNISFLRLDGTLSQQQRERVLKKFSEDSDVMVLLMSLKAGGVGINLTA 950          
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Match: A0A0A9DBF6_ARUDO (CHR903 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DBF6_ARUDO)

HSP 1 Score: 80.9 bits (198), Expect = 3.440e-17
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    7 GGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRESALKSFETDSSVAVMLVSLKAGGVGLNLTA 80
            G K++VFSQ   WT  LDL++  LSR   SF RLDG+++ Q+RE  +K F  D S+ V+L+SLKAGGVG+NLTA
Sbjct:   43 GAKSIVFSQ---WTAFLDLLQIPLSRNNISFTRLDGTLNHQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTA 113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNY9_ECTSI6.320e-3174.36DNA repair helicase rad5,16, putative (Partial) (F... [more]
A0A6H5KHD4_9PHAE3.500e-2875.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1XFX6_HETAK1.250e-2066.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0L0H763_SPIPD2.570e-1869.01Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A7S3ZFV6_9EUKA1.180e-1758.33Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
SM3L2_ARATH1.650e-1759.46DNA repair protein RAD5A n=19 Tax=Brassicaceae Tax... [more]
A0A388LEU3_CHABU2.270e-1758.44Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
UPI00192EDC852.890e-1754.55DNA repair protein RAD5A-like n=1 Tax=Eucalyptus g... [more]
A0A0K9RQK1_SPIOL3.080e-1760.81Uncharacterized protein n=3 Tax=Chenopodioideae Ta... [more]
A0A0A9DBF6_ARUDO3.440e-1755.41CHR903 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 3..79
e-value: 8.6E-9
score: 35.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..80
e-value: 1.0E-22
score: 82.6
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 3..80
NoneNo IPR availablePANTHERPTHR45626:SF16TRANSCRIPTION TERMINATION FACTOR 2coord: 3..80
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:399625..400550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14107.1mRNA_P-fluviatile_contig76.14107.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig76 399625..400550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig76.14107.1 ID=prot_P-fluviatile_contig76.14107.1|Name=mRNA_P-fluviatile_contig76.14107.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=80bp
LRRKRPGGKAVVFSQARWWTHMLDLVETCLSRGGFSFRRLDGSMSQQRRE
SALKSFETDSSVAVMLVSLKAGGVGLNLTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase