prot_P-fluviatile_contig75.14038.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig75.14038.1
Unique Nameprot_P-fluviatile_contig75.14038.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1416
Homology
BLAST of mRNA_P-fluviatile_contig75.14038.1 vs. uniprot
Match: D8LMM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM2_ECTSI)

HSP 1 Score: 1011 bits (2613), Expect = 0.000e+0
Identity = 679/1386 (48.99%), Postives = 806/1386 (58.15%), Query Frame = 0
Query:  116 SHGWAFLCANGSVLAWEQGMVPAERRGAAVGADQNCLRFDFPIMIQELAAMDPLEVPVEAADLVALTQPWEACGGKREMLLVSPGGLARYWPDLHSPRRFTDVDARSAAPGQSVTRVAALGPAEFLCGLSKGGVLRIRPGVARPCLLTQTPASVLGLGFSTIKRMGSFLGKKALAGAAXXXXXXXXXXXXXXXXXXXXXPVVALAAACPPRGSPAPTSFRVICLTTDALEVWSVAKERGXXXXXXXXSLEHLEVRQPLSSQIAQALGVRGGVRLVDVKVTGAPSCV--PGAVVGSRDMQSSSSSSSHAANWGLDLVVLAEA-------------------------GGEAGSGAFSVHALRVSSEEASWIGSSVTAKLLSSHRLDVT---------------------SPNISAAAAGAPLSRPRATLVADNERAFSPRHVNGANAPGGDVLVHVFMTSFPPSTRTGAAPVAAAEGGGAA-AHVWSACVKTGGAGGSGDEI------VEWEKRGSVEVSRRNALVGGCIGGGGALLGCPGVVLLAAGGQAVWVAPLSDAS---------GPAVDL----DLDSSVISSDAAAEWRKALLDEGLKFFEDGEFMDTARVAVEALLSLAAGEVDRAVSEGLDEGTRAWPTTTSHPYPSTPRLFLRAQVGLEVLNGSWRPPAAFASPHQLLHLSLSDKARSHRALVRFLMDAGVWGAASVGRAAISEGGEKIAAAARLCELQAGFLSFRSRDAISRDAVGAKAAGLLDDCIARSMQRREA-AGDAXXXXXXAVPSARDRYFERTQGVLDALVELHFPRLDDEAPSSSIGGATLTPLLRTLL-DPALAEGDRLPLLNHLSVVVAGFFEAALRHRAAERNLYRAGLRGKVWTSSVEARLVLYRQLQAYVETIDGIALQGAGS-GRGASEI----TRRVIGRLSEMLLDGFKEEAEAHPAASDSVEWQGEYVLAKELCVEVVAACGREDLARSLAEKHHYLEGTVALCHAAELRKPGCENGHRLLRKKMGHPAEVQEGMDAYDETQEERLEREGFAHFVLDWHLRRGLKTALLDVGAAVPSLLCEFLADWREAELLWVFQIRLKDYTGAGQALTRGTPPANQQGGRCEAQRLWLSLAKLAFLAGEVSGGDEGEGGRDAGFAADPARGAEIQRRLELAEARDRLVKSRPP--AEAAMDDDNPWTWEETLAEATHRLNSL--SAEPEPEGEGGY----EVEKAADIAFQGYRALVAGLPGKSYESADRLWREVVRLTLADPRVGAAIAKGAMPTAAEDDTEATDREMEASHPRPTMLHLLLRAIQKDRRLRREVPWTGGGATDRARAAAE---EVKIDLTDESLSAMVRQLMPAGADKNGATCEAWVSAIRKCPW 1415
            S  WAF+C +  VLAWEQGMV AER GAAV AD+ CL+F+ P M+ ELA M PL                   GGK                                    +VTRV ALGP +FLCGLS+GG+LR+RPG+  P LLTQ   SVLG GFSTI+RMG     +A A AA                     PVVAL+ A PP GSPA    RV+ LTTD LEVWS+    G            LEVR PL+SQI +ALGVR    L+DV VTGAP+ V  P A                  +WGL+L+V                             GGE      SVHA+RVS  EASW+GSSV+ +++SSH +  T                     + N SA A+  P  R RATLVADNE+AFS    +G    G      +    F PS+ +   P A+  GGG A A VWS CVK  G  G+          +EWE+RGSV VS R AL GGC+GGGGALLGCPGVVLL++ GQAVWVAP    S         G AVDL    ++ +++  +D + EWR AL++ GL+ FEDGE MD AR+AV +LL  AA E  R      ++   A       P P   R     Q GLEVLNGSWR P+AFASPHQL+HL+L +KAR  RALVR L+DAG WGA+SVGRAA+SE GEK+AAA+RLCELQ         D+ISR  VGAKAAGLL+ C+  S++ REA AG  XXXXXX   S RDRYFE TQGVLDA VELH PRLD+ APSSSI GA+ TPL + LL D +L EGDRLPLL+H+SVV+AG FEAALRHRA+ER++YR+GLRGK+WT+S EARL+L+RQL AY  +IDGI LQG G+ GR         T  VI RLS +LLDGFKEE +A+PAAS  VEW+ EY  +K+LCVEVVAACGREDLA +LA+ H Y EGTVA+CH AE RKPGC+NG RLLR++M  P+                               RR                                            +AL RG+PPANQ+GG+CEAQ LWL+LAKLA LAG    GD G          D  RG EIQRRLELAE R+ L+KSRP    +A ++ D PW W++ L E+T +LNSL      E EGEGG      V  AADIAFQGYRALVAGLP +SY  AD LWREV+ LTL DP V  A+AKGAMP+A+E  T  +DREMEA   RPT LHLLLRAIQKDRRLRR  PW G               E KIDLTDESLS+ VR+LMPA AD  GA CEAW++AIRKCPW
Sbjct:   25 SQRWAFMCTDTGVLAWEQGMVAAERPGAAVRADEACLQFEHPAMMHELAMMAPL-------------------GGKI-----------------------------------AVTRVVALGPTDFLCGLSRGGILRLRPGLDAPILLTQKTTSVLGRGFSTIRRMGG----EATAAAATTAASAS--------------PVVALSVARPPGGSPAGIPSRVVRLTTDTLEVWSIGVGGGTPC---------LEVRHPLASQIQRALGVRQAC-LLDVAVTGAPTTVSPPPAXXXXXXXXX------XVVSWGLELLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGE-----LSVHAVRVSCGEASWVGSSVSVQVISSHHVSTTXXXXXXXXXGRRGRQPAFRAAASNPSAPASLGPGCR-RATLVADNEQAFSTG--DGTRVGGXXXXXXIGAHVFWPSSTS---PDASVRGGGTATAQVWSVCVKDRGGDGASXXXXXXXXXIEWEERGSVTVSSRTALSGGCVGGGGALLGCPGVVLLSSQGQAVWVAPRHTESPXXXXXATAGLAVDLGPRPEVVAAIPGNDTSEEWRMALVEGGLRAFEDGETMDPARLAVGSLLGRAAQETGRGAMSSTEDLDSAIVWGWEGPKPVAARGKGHIQAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLLDAGAWGASSVGRAALSECGEKVAAASRLCELQ---------DSISRKHVGAKAAGLLEGCVKLSLRNREARAGAXXXXXXXXXASERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASRTPLAKALLFDSSLEEGDRLPLLDHVSVVIAGVFEAALRHRASERSVYRSGLRGKLWTASGEARLILFRQLLAYNGSIDGIYLQGPGAAGRXXXXXXXXGTSGVIERLSVLLLDGFKEEKDANPAASGRVEWENEYTNSKKLCVEVVAACGREDLALALADTHGYPEGTVAICHEAEGRKPGCQNGQRLLRQRMEDPS-------------------------------RR--------------------------------------------RALARGSPPANQKGGKCEAQHLWLNLAKLANLAG--GSGDGGPNASSDPVRVDLVRGGEIQRRLELAEVRENLIKSRPANAMDATINGDEPWGWKDALEESTTQLNSLWQGGPAEEEGEGGVAGVTSVVGAADIAFQGYRALVAGLPEQSYLHADSLWREVIGLTLTDPHVKEAVAKGAMPSASEGRTAVSDREMEAVWERPTALHLLLRAIQKDRRLRRGAPWAGXXXXXXXXXXXXXXXEGKIDLTDESLSSTVRELMPAAADGGGALCEAWIAAIRKCPW 1225          
BLAST of mRNA_P-fluviatile_contig75.14038.1 vs. uniprot
Match: A0A6H5JHH9_9PHAE (Nucleoporin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH9_9PHAE)

HSP 1 Score: 927 bits (2396), Expect = 1.120e-314
Identity = 629/1324 (47.51%), Postives = 755/1324 (57.02%), Query Frame = 0
Query:  101 TAESSGG--VRCSGRVLSHGWAFLCANGSVLAWEQGMVPAERRGAAVGADQNCLRFDFPIMIQELAAMDPLEVPVEAADLVALTQPWEACGGKREMLLVSPGGLARYWPDLHSPRRFTDVDARSAAPGQSVTRVAALGPAEFLCGLSKGGVLRIRPGVARPCLLTQTPASVLGLGFSTIKRMGSFLGKKALAGAAXXXXXXXXXXXXXXXXXXXXXPVVALAAACPPRGSPAPTSFRVICLTTDALEVWSVAKERGXXXXXXXXSLEHLEVRQPLSSQIAQALGVRGGVRLVDVKVTGAPSCVPGAVVGSRDMQSSSSSSSHAANWGLDLVVLAEAGGEA--------------GSGA-FSVHALRVSSEEASWIGSSVTAKLLSSHRLDVTSPNISAAAAGA---------PLSRP-------------RATLVADNERAFSPRHVNGANAPGGDVLVHVFMTSFPPSTRTGAAPVAAAEGGGAA-AHVWSACVKTGGAGGSGDEIVEWEKRGSVEVSRRNALVGGCIGGGG------ALLGCPGVVLLAAGGQAVWVAP-------LSDASGPAVDL----DLDSSVISSDAAAEWRKALLDEGLKFFEDGEFMDTARVAVEALLSLAAGEVDR---AVSEGLDEGTRAWPTTTSHPYPSTPRLFLRAQVGLEVLNGSWRPPAAFASPHQLLHLSLSDKARSHRALVRFLMDAGVWGAASVGRAAISEGGEKIAAAARLCELQAGFLSFRSRDAISRDAVGAKAAGLLDDCIARSMQRREAAGDAXXXXXXAVPSARDRYFERTQGVLDALVELHFPRLDDEAPSSSIGGATLTPLLRTLL-DPALAEGDRLPLLNHLSVVVAGFFEAALRHRAAERNLYRAGLRGKVWTSSVEARLVLYRQLQAYVETIDGIALQGAGSGRG--------ASEITRRVIGRLSEMLLDGFKEEAEAHPAASDSVEWQGEYVLAKELCVEVVAACGREDLARSLAEKHHYLEGTVALCHAAELRKPGCENGHRLLRKKMGHPAEVQEGMDAYDE----------TQEERLEREGFAHFVLDWHLRRGLKTALLDVGAAVPSLLCEFLADWREAELLWVFQ---IRLKDYTGAGQALTRGTPPANQQGGRCEAQRLWLSLAKLAFLAGEVSGGDEGEGGRDAGFAADPARGAEIQRRLELAEARDRLVKSRPP---AEAAMDDDNPWTWEETLAEATHRLNSL----SAEPEPEG--EGGYEVEKAADIAFQGYRALVAGLPGKSYESADRLWREVVRLTLADPRVGAAIAKGAMPTAAEDDTEATDREMEAS 1333
            TAE+SGG    C+GRVLSHGWAF+C +  VLAWEQGMV AER GAAV ADQ CLRF+ P M+ ELA M PL                   GGK                                          A+G  E L G+S                      + LG+  S     G+       AGA                                  G PA    RV+ LTTD LEVWSV    G            LEV  PL+SQI +ALGVR    L+DV VTGAP+      V        +S+S    +WGL+L+VLA AG                 G G   SVHA+RVSS EASW+GSSV+ +++SSH +  TS   +A A  A         P + P             RATLVADNE+AFS          GG ++ HVF  S P       +P  + EGGG A A VWS CVK  G  G+                                    ALLGCPGVVLL+  GQAVWVAP        + A+G AVDL    ++ +S+  +D + EW+ AL++ GL+ FE+G+ MD  R+A+ +LL  AA E  R   A +E +D                        + GLEVLNGSWR P+AFASPHQL+HL+L +KAR  RALVR LMDAG WGA SVGRAA+SE GEK+AAA+RLCELQ         D+ISR  VGAKAAGLL+DC+  S++ REA   A      AV S RDRYFE TQGVLDA VELH PRLD+ APSSSI GA+ TPL + LL D +L EGDRLPLL+H+SVV+AG FEAALRHRA+ER++YR+GLRGK+WT+S EARLVL+RQL AY  +IDGI LQG G+           + E T  VI RLS +LLDGFKEE +A+PAAS  VEW+ EY  +K+LCVEVVAACGREDLA  LA+ H Y EGTVA+CH AE RKPGC NGHRLLR++M  P    EG    +E          ++E R ER+ FA FVLDWHLR G KTALL VG  VP +LCEFLADW+EAELLW+FQ   IR  DYTGA +AL RG+PPANQ+GG+CEAQ LWLSLAKLA LAG    GD+G          D  RG EIQRRLELAE R++L++S P     +A ++ D PW W++ L E+T +LNSL     AE   EG   G   V +AADIAFQGYRALVAGLP +SY  AD LWREV+ LTL DP V  A+AKGAMP+A+ED T  +DREMEAS
Sbjct:    8 TAETSGGRGCLCTGRVLSHGWAFMCTDTGVLAWEQGMVAAERPGAAVRADQVCLRFEHPAMMHELALMAPL-------------------GGK-----------------------------------------IAVGFCELLSGMS----------------------ATLGMRVSKASGRGAL--DHFRAGARVFQNQEDG-------------------------GIPA----RVVRLTTDILEVWSVGGGGGTPC---------LEVCHPLASQIQRALGVRQAC-LLDVAVTGAPT-----TVSPSPASGEASASPPVVSWGLELLVLAAAGAXXXXXRYXXXXXXXXXGDGRELSVHAVRVSSGEASWVGSSVSVQVISSHHVTTTSATATAEAVAAARRGRQPAFPAAAPNPPAPASLGPGCRRATLVADNEQAFSTGDGTRVGGGGGGIVAHVFWPSSP-------SPDVSVEGGGTATAQVWSVCVKAWGGDGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLGCPGVVLLSRQGQAVWVAPRHTESPAAAAAAGLAVDLGPCPEVFASIPGNDTSEEWKMALVEGGLRAFEEGKTMDPTRLAMGSLLGRAAQETGRGAMASTENIDSAI--------------------VRAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLMDAGAWGALSVGRAALSECGEKVAAASRLCELQ---------DSISRKHVGAKAAGLLEDCVKFSLRNREARSGAAAAV--AVTSERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASRTPLAKALLFDSSLEEGDRLPLLDHVSVVIAGVFEAALRHRASERSVYRSGLRGKLWTASSEARLVLFRQLLAYNGSIDGICLQGPGAAGXXXXXXXXVSREATSGVIERLSVLLLDGFKEEKDANPAASGRVEWEKEYTNSKKLCVEVVAACGREDLALELADIHGYPEGTVAICHKAEGRKPGCRNGHRLLRQRMEGPRRRFEGRGQEEEGKAADGGGVESRESRAERQTFARFVLDWHLRHGYKTALLQVGEVVPDMLCEFLADWKEAELLWIFQARSIRRGDYTGARRALARGSPPANQKGGKCEAQHLWLSLAKLANLAG--GSGDDGPNASSDPVTVDLVRGGEIQRRLELAEVREKLIESLPANDAMDAMINGDEPWGWKDALEESTSQLNSLWQGGPAEESEEGGVAGVLSVVRAADIAFQGYRALVAGLPEQSYLHADSLWREVIGLTLTDPHVKEAVAKGAMPSASEDRTAVSDREMEAS 1163          
BLAST of mRNA_P-fluviatile_contig75.14038.1 vs. uniprot
Match: A0A835YV83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV83_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.400e-9
Identity = 55/193 (28.50%), Postives = 88/193 (45.60%), Query Frame = 0
Query:   81 ETESHAVVRAGSVPAAXXXXTAESSGGVRCSGRVLSH-GWAFLCANGSVLAWEQGMVPAERRGAAVGADQNCLRFDFPIMIQELAAMDPLEVPVEAADLVALTQPWEACGGKREMLLVSPGGLARYWPDLHSPRRFTDVDARSAAPGQSVTRVAALGPAEFLCGLSKGGVLRIRPGVARPCLLTQTPASVLGL 272
            E +SH V     +PA        + GG     +VL+   WA L   G +  WEQ + P    GA  GA    +  + P  + E+       V  +A   V + +     GG +E+L+++P G  R+W D+  P+   D +  +  P + VT V  +   EF+CGLS G  + +RP ++ P  L    + + GL
Sbjct:   51 EHKSHIVDTCNRLPATVRVALESADGGQPIGAKVLTTPSWAVLSLGGRLYVWEQLVAPDHSGGA--GAPLAHV-LELPGGMDEVVGGGGA-VSTDAMQRVDMVEAGGP-GGAKELLVLTPRGAGRHWRDVRRPQHNVDTEV-ALGPDEFVTCVVGVNRGEFVCGLSSGAAMWLRPTLSAPVRLAPARSRLGGL 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMM2_ECTSI0.000e+048.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHH9_9PHAE1.120e-31447.51Nucleoporin_C domain-containing protein n=1 Tax=Ec... [more]
A0A835YV83_9STRA5.400e-928.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 72..290
e-value: 1.3E-5
score: 26.3
NoneNo IPR availableGENE3D1.25.40.700coord: 721..1192
e-value: 2.3E-25
score: 91.2
NoneNo IPR availableSUPERFAMILY117289Nucleoporin domaincoord: 92..258
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminalPFAMPF03177Nucleoporin_Ccoord: 1008..1220
e-value: 1.2E-12
score: 47.4
IPR037624Nuclear pore complex protein Nup133-likePANTHERPTHR13405FAMILY NOT NAMEDcoord: 44..417
coord: 734..1224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:384220..405404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14038.1mRNA_P-fluviatile_contig75.14038.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig75 384220..405404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig75.14038.1 ID=prot_P-fluviatile_contig75.14038.1|Name=mRNA_P-fluviatile_contig75.14038.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1416bp
ALRFRSTHSSQGNMETVDGGFFAVRSRSGDPTTEDLHLRTSHPKRLNSGK
SHQGQRGDRPSPSSLAAAANAAAAASSCLAETESHAVVRAGSVPAAAAAA
TAESSGGVRCSGRVLSHGWAFLCANGSVLAWEQGMVPAERRGAAVGADQN
CLRFDFPIMIQELAAMDPLEVPVEAADLVALTQPWEACGGKREMLLVSPG
GLARYWPDLHSPRRFTDVDARSAAPGQSVTRVAALGPAEFLCGLSKGGVL
RIRPGVARPCLLTQTPASVLGLGFSTIKRMGSFLGKKALAGAAAAPATDD
DLAASAAAPLATAAPVVALAAACPPRGSPAPTSFRVICLTTDALEVWSVA
KERGGGGGGGGGSLEHLEVRQPLSSQIAQALGVRGGVRLVDVKVTGAPSC
VPGAVVGSRDMQSSSSSSSHAANWGLDLVVLAEAGGEAGSGAFSVHALRV
SSEEASWIGSSVTAKLLSSHRLDVTSPNISAAAAGAPLSRPRATLVADNE
RAFSPRHVNGANAPGGDVLVHVFMTSFPPSTRTGAAPVAAAEGGGAAAHV
WSACVKTGGAGGSGDEIVEWEKRGSVEVSRRNALVGGCIGGGGALLGCPG
VVLLAAGGQAVWVAPLSDASGPAVDLDLDSSVISSDAAAEWRKALLDEGL
KFFEDGEFMDTARVAVEALLSLAAGEVDRAVSEGLDEGTRAWPTTTSHPY
PSTPRLFLRAQVGLEVLNGSWRPPAAFASPHQLLHLSLSDKARSHRALVR
FLMDAGVWGAASVGRAAISEGGEKIAAAARLCELQAGFLSFRSRDAISRD
AVGAKAAGLLDDCIARSMQRREAAGDAAAAAAAAVPSARDRYFERTQGVL
DALVELHFPRLDDEAPSSSIGGATLTPLLRTLLDPALAEGDRLPLLNHLS
VVVAGFFEAALRHRAAERNLYRAGLRGKVWTSSVEARLVLYRQLQAYVET
IDGIALQGAGSGRGASEITRRVIGRLSEMLLDGFKEEAEAHPAASDSVEW
QGEYVLAKELCVEVVAACGREDLARSLAEKHHYLEGTVALCHAAELRKPG
CENGHRLLRKKMGHPAEVQEGMDAYDETQEERLEREGFAHFVLDWHLRRG
LKTALLDVGAAVPSLLCEFLADWREAELLWVFQIRLKDYTGAGQALTRGT
PPANQQGGRCEAQRLWLSLAKLAFLAGEVSGGDEGEGGRDAGFAADPARG
AEIQRRLELAEARDRLVKSRPPAEAAMDDDNPWTWEETLAEATHRLNSLS
AEPEPEGEGGYEVEKAADIAFQGYRALVAGLPGKSYESADRLWREVVRLT
LADPRVGAAIAKGAMPTAAEDDTEATDREMEASHPRPTMLHLLLRAIQKD
RRLRREVPWTGGGATDRARAAAEEVKIDLTDESLSAMVRQLMPAGADKNG
ATCEAWVSAIRKCPW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR007187Nucleoporin_Nup133/Nup155_C
IPR037624Nup133-like