prot_P-fluviatile_contig75.14023.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig75.14023.1
Unique Nameprot_P-fluviatile_contig75.14023.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length360
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig75.14023.1 vs. uniprot
Match: D8LK01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK01_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 5.550e-33
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0 
Query:    9 YGAFVPTDRAYYNVSTPTVSGRRPSSEQMREYRRNNFTCGIDTHRSDISFGRTTESIRAGDAGDLRAREATRSLTSGEV 87
            YGAF+PTDRAY+NV TP  S RRPSSE +REYRRNN T GIDTHRSD+SFGR TESIR G  GD RAREAT+SLTSGEV
Sbjct:   16 YGAFMPTDRAYFNVRTPRASVRRPSSENVREYRRNNVTAGIDTHRSDVSFGRNTESIRGGVDGDSRAREATKSLTSGEV 94
[Close]
BLAST of mRNA_P-fluviatile_contig75.14023.1 vs. uniprot
Match: A0A6H5KS57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS57_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.130e-26
Identity = 54/78 (69.23%), Postives = 60/78 (76.92%), Query Frame = 0 
Query:  282 PTPSTSTRLYTGIPGLPAFDPVFDRHHKYDLIAEERAARGGEVTGRFGKVHGSSVRAASLLTSELSTPWSHVLRGQKW 359
            P PS++ +     P   + DPVFDRHHKYDL+AEERAA G  VTGRFG + G SV AASLLTSELSTPWSHVLRGQKW
Sbjct:    3 PAPSSAAKP----PRFRSLDPVFDRHHKYDLVAEERAAEGMMVTGRFGPIQGPSVLAASLLTSELSTPWSHVLRGQKW 76
[Close]
BLAST of mRNA_P-fluviatile_contig75.14023.1 vs. uniprot
Match: A0A835YTX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.480e-9
Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 0 
Query:   10 GAFVPTDRAYYNVSTPTVSGRRPSSEQMREYRRNNFTCGIDTHRSDISFGRTTESIRAGDAGDLRAREATRSLTSGEV 87
            G +VP+D+A+YN+ T      R  + Q   YRR+N   GI+THRSDIS+G T   I  G   +  A      LTSGEV
Sbjct:   15 GQYVPSDKAFYNMHTARPGDHRRPTNQT--YRRDNSLVGIETHRSDISYGHTVARISTGPNAERLATLHATMLTSGEV 90
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LK01_ECTSI5.550e-3378.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS57_9PHAE1.130e-2669.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTX7_9STRA8.480e-943.59Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:257053..258641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14023.1mRNA_P-fluviatile_contig75.14023.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig75 257053..258641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig75.14023.1 ID=prot_P-fluviatile_contig75.14023.1|Name=mRNA_P-fluviatile_contig75.14023.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=360bp
MRGHCYRRYGAFVPTDRAYYNVSTPTVSGRRPSSEQMREYRRNNFTCGID
THRSDISFGRTTESIRAGDAGDLRAREATRSLTSGEVGGFRWPAERAREG
DVEAIVSAAAAATAAAASSASVLASSLSSPGGGAPPPPSMMLSVRSTKQH
EQEAEKAIVSARNRQKQQDALSNGCHTQRSDSTFASSSSLSSRSCNSLRL
SSFRSSVSLSPQEQGSSSSISGGEGGRRTRRPTSSDARHPGAATLETSRS
SEQQLSHRSGASSSSVREQRLRPTVLVPRAAPTPSTSTRLYTGIPGLPAF
DPVFDRHHKYDLIAEERAARGGEVTGRFGKVHGSSVRAASLLTSELSTPW
SHVLRGQKW*
back to top