prot_P-fluviatile_contig75.14005.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig75.14005.1
Unique Nameprot_P-fluviatile_contig75.14005.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length601
Homology
BLAST of mRNA_P-fluviatile_contig75.14005.1 vs. uniprot
Match: D8LRD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD7_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 2.940e-96
Identity = 194/390 (49.74%), Postives = 239/390 (61.28%), Query Frame = 0
Query:   66 LREQLERLVSHKLRTSGGDLDHAGLLALEALSKLPPATSDQPATSVGAGGAG------ECRPRKILPSGLEKIPKFSGRNPEGLTDTLGQFYSLVVDALPNQSPGAINKALTRDVIFVLEGAALKFYNSLKAGHVEWESTTPASSHPEAAAVAEREAAPQLETQPEFGRGRFRPPSTWADLCEAFHDHFLPAAGIARTSEKLISLSQAANESVLSLAQRQLGLATHLNRLIEANGDQINFMEAISIRIFERALRTDLRRAQEAEPPCRSFQDSVNRAERNASRLSK-----KDTAGGAGEVTVSVPD---------PVPTSISGWPASKGGLVADG--HSGVLPRMESDHD----AMEGGGRDVRPSTVAVAGSEPGHRRQAQTVGGNAA 429
            LREQL++LVS KL   G +LDHAGLLALE LSK+ P     P     AGG+       + RPR+ILP G+EK+ KFSG++P  ++D L +F+SLVV ALP  SPG +NKAL RDV+FVLEGAALKF+ SLKAG +EWE T P S     A             Q + G+  FRPPSTWA++  AFHDH+LPA GIARTS+ L SLSQAA+ESV +L QRQ+GL  HL+RLIEANG Q  F EAI IR+FERALR DL+R Q AEPPC +FQ+SV+RA+RNA RL K     ++ AG         P+         P  +S SG    K G+ + G   +  L R  S        + G G DV P    V G  P HR++    GG  A
Sbjct:    3 LREQLQKLVSQKLAAKG-ELDHAGLLALETLSKMAPEGEVDPVGGSSAGGSSSVGGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQMEWEPTPPPSLQQRGAEAGAG------GVQQQAGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEXXXXXXXPPEDNRLHHGTRPQDSSSSGAGEGKEGVQSSGGLKAPALVRSSSSSARGPLTVSGTGEDVAP---VVGGFLPPHRKRENDAGGGGA 382          
BLAST of mRNA_P-fluviatile_contig75.14005.1 vs. uniprot
Match: A0A6H5L3E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E1_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 1.610e-94
Identity = 188/385 (48.83%), Postives = 236/385 (61.30%), Query Frame = 0
Query:   66 LREQLERLVSHKLRTSGGDLDHAGLLALEALSKLPPATSDQPATSVGAGGAG-----ECRPRKILPSGLEKIPKFSGRNPEGLTDTLGQFYSLVVDALPNQSPGAINKALTRDVIFVLEGAALKFYNSLKAGHVEWESTTPASSHPEAAAVAEREAAPQLETQPEFGRGRFRPPSTWADLCEAFHDHFLPAAGIARTSEKLISLSQAANESVLSLAQRQLGLATHLNRLIEANGDQINFMEAISIRIFERALRTDLRRAQEAEPPCRSFQDSVNRAERNASRLSK-----KDTAGGAGEVTVSVPDPVPTSISGWPASKGGLVADGHSGVLPRMESDHDAMEGGGRDVR--PSTVA---------VAGSEPGHRRQAQTVGGNAA 429
            LREQL++LVS KL   G +LDHAGLLALE LSK+ P     P     AGG       + RPR+ILP G+EK+ KFSG++P  ++D L +F+SLVV ALP  SPG +NKAL RDV+FVLEGAALKF+  LKAG +EWE T P S     A       A  ++ QP  G+  FRPPSTWA++  AFHDH+LPA GIARTS+ L SL QAA+ESV +L QRQ+GL  HL+RLIEANG Q  F EAI IR+FERALR DL+R Q AEPPC +FQ+SV+RA+RNA RL K     ++ AG         P+     +   P      V +G  GV     S   A+ G    +   P T++         V G +P H +  + +GG  A
Sbjct:    3 LREQLQKLVSQKLAAKG-ELDHAGLLALETLSKMAPEGEVDPVGGSSAGGGASVGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKLLKAGQIEWEPTPPPSLQQRGAEAG----AGGVQQQP--GKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLRQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGXXXXERPPEDNRLRLGTKPQGGSSGVGEGKGGVQSSDGSKGPALVGSSSSLARGPLTLSGTFEDVAPVVGGFQPPHGKTEKKLGGGGA 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRD7_ECTSI2.940e-9649.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3E1_9PHAE1.610e-9448.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 326..346
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 228..288
e-value: 7.0E-6
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:61457..63259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14005.1mRNA_P-fluviatile_contig75.14005.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig75 60044..63340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig75.14005.1 ID=prot_P-fluviatile_contig75.14005.1|Name=mRNA_P-fluviatile_contig75.14005.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=601bp
MSSMMTSDVGSDSPEAGEIRRSLDHFNTQPGAAAVVPATVGGVGGGGGGH
IAVDLKLLKMGEEGGLREQLERLVSHKLRTSGGDLDHAGLLALEALSKLP
PATSDQPATSVGAGGAGECRPRKILPSGLEKIPKFSGRNPEGLTDTLGQF
YSLVVDALPNQSPGAINKALTRDVIFVLEGAALKFYNSLKAGHVEWESTT
PASSHPEAAAVAEREAAPQLETQPEFGRGRFRPPSTWADLCEAFHDHFLP
AAGIARTSEKLISLSQAANESVLSLAQRQLGLATHLNRLIEANGDQINFM
EAISIRIFERALRTDLRRAQEAEPPCRSFQDSVNRAERNASRLSKKDTAG
GAGEVTVSVPDPVPTSISGWPASKGGLVADGHSGVLPRMESDHDAMEGGG
RDVRPSTVAVAGSEPGHRRQAQTVGGNAAQVAQDSPAGGSLSDCRSRSQS
ASVRYEGQADSEGGGGGFQKPKKRSKKGQQFSLDFQAGQVRGGAGKSTPP
KKRQGQVDPAAVPPCKLPQCKAINRQFHSSNDCYFHATHGERNRERARLA
RQANKRIGRGDRGGYNDNFEYRGPPNHDGGFDERGVLNNYGIGYEWGRFH
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom