prot_P-fluviatile_contig75.13999.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig75.13999.1
Unique Nameprot_P-fluviatile_contig75.13999.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length221
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig75.13999.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.850e-5
Identity = 46/121 (38.02%), Postives = 56/121 (46.28%), Query Frame = 0 
Query:   21 DRSGDSSRCLR--AFVAFLNQLSLSGVQRWYTSSKQPQLARW-ICAACRKLPP----------AQLWTAPAGRESRSG-EELTVTRVLVAGARSVAWNLPDSALAHGGDASEKVEFLDISD 127
            D  G+    LR  A    LNQ+S  GV  WYTS  Q QLA   +C ACR++P           A LW   A   +RS    L  +RV     R V WNL   ++ H GDA E V+ L   D
Sbjct:    5 DEQGNKRSKLRQDALDIALNQVS--GVNGWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGD 123
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.13999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMU8_9PHAE2.850e-538.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.633

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:19404..20066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.13999.1mRNA_P-fluviatile_contig75.13999.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig75 19091..21398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig75.13999.1 ID=prot_P-fluviatile_contig75.13999.1|Name=mRNA_P-fluviatile_contig75.13999.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
MIRRSHLILHIHLVILFASLDRSGDSSRCLRAFVAFLNQLSLSGVQRWYT
SSKQPQLARWICAACRKLPPAQLWTAPAGRESRSGEELTVTRVLVAGARS
VAWNLPDSALAHGGDASEKVEFLDISDDAKESLEGLARVDCESSDFGGLF
NQPIGNLLSPQNRRFFTFGGFNQGITGVTWSSSLETLKLLGDSNEPLKGV
SFPMLLHTLTILWERPVIFG*
back to top