prot_P-fluviatile_contig74.13987.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig74.13987.1
Unique Nameprot_P-fluviatile_contig74.13987.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length545
Homology
BLAST of mRNA_P-fluviatile_contig74.13987.1 vs. uniprot
Match: D7FWK1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK1_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 5.930e-66
Identity = 207/497 (41.65%), Postives = 264/497 (53.12%), Query Frame = 0
Query:    2 EELRGD--RGSYGYEDLALGKSLDDP---FQFNFDSVYRDVDVRTARHTKSKGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGGGTNYCKSASAGGGKKGLSKERLNFDGSXXXXXNRMNRGRQSKLLVRQGSLSQADTASAKKVKTRQRNQEVRRAKKEKEDRFHAE-SAAVG-----GGLW--------ETYNTPEGFIDGGSXXXXXXHYGPSSGSFTALNRLLLHGKEGIRCRVKKQSNRPSDSNVQKAQTILAKSLQRGGKSVLLPGLDLRYPQNVRALLEDAAQALQHGLL------------PAMQSPLAWTSYWAPMQILDLSRNMLEGIDALLVVDVPAGDGGRGGGVVQETAAAAMKSGDGEGGDGDVGQDWAPGIDGGGGVAREEPGMKCGEERTRVHLLAGLQELRLNGNQLHGIPWDLTCALSSLVKLELYGNRIVEIRAPQ 467
            EELRGD  R  +G EDLALGKSL+     F    D++YR V+ R+ + +K+KGLG                     XXXXXXXXXX                                 XXX +G G    +SASA GGKK   K  L+FD +      ++NR  QS LLV +   SQ + AS +K +T+ R+QEVR+A K+KEDR + E +AAVG     GG W        E+++      +GG         G  S S+ A    LL  +EGI  R+KK +NRP DS V+KAQT LAK+L++GGK VLLPGL+LRYPQNV ALL+DAAQA +HGLL               ++PLAWT  W+P+Q++DLS N LEGID+LL+V+   G               A  S DGEGG G+                + E G   G     V+ LAGL+ELRLNGN LHG+P ++   L SL KLEL GN I EIRAP+
Sbjct:  225 EELRGDGGRNGFGGEDLALGKSLEHDHGFFNHKEDALYRKVEARSTKSSKNKGLG-----------RGGSSGSLAGXXXXXXXXXXSWGRNGRKSGGSSLLKIGDSVSTSSSVGGGCDGXXXXKGSGNKINRSASASGGKKDPLKAGLDFD-ALAGSARKINRS-QSLLLVPKQPPSQTNMASVRKNRTKLRSQEVRKAMKDKEDRCNVEKTAAVGLWQTSGGEWTLAPEKSDESWDARASLCNGGDG-------GGHSSSWQARPNRLLQEEEGILGRIKKLANRPLDSMVRKAQTSLAKALRKGGKRVLLPGLELRYPQNVAALLDDAAQAWEHGLLHPRRGGNNSSVASGAKTPLAWTKSWSPIQVMDLSGNDLEGIDSLLMVETLPG------------VVGAAVSKDGEGGGGN----------------QSEAG---GRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPR 670          
BLAST of mRNA_P-fluviatile_contig74.13987.1 vs. uniprot
Match: A0A6H5J7I8_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I8_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 5.100e-57
Identity = 221/549 (40.26%), Postives = 278/549 (50.64%), Query Frame = 0
Query:    2 EELRGDRGS--YGYEDLALGKSLDDP---FQFNFDSVYRDVDVRTARHTKSKGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGGGTNYCKSASAGGGKKGLSKERLNFDGSXXXXXNRMNRGRQSKLLVRQGSLSQADTASAKKVKTRQRNQEVRRAKKEKEDRFHAE-SAAVG-----GGLW--------ETYNTPEGFIDGGSXXXXXXHYGPSSGSFTALNRLLLHGKEGIRCRVKK---------------------------------------------------QSNRPSDSNVQKAQTILAKSLQRGGKSVLLPGLDLRYPQNVRALLEDAAQALQHGLL------------PAMQSPLAWTSYWAPMQILDLSRNMLEGIDALLVVDVPAGDGGRGGGVVQETAAAAMKSGDGEGGDGDVGQDWAPGIDGGGGVAREEPGMKCGEERTR-VHLLAGLQELRLNGNQLHGIPWDLTCALSSLVKLELYGNRIVEIRAPQ 467
            EELRGD G   +G EDLALGKSL+     F    D++YR V+ R+ + +K+KGLG         XXXXXXXXXXXXXXXX                        XXXXXXXXXXXXX              +SASA GGKK   K  L+FD +      ++NR  QS LLV +  LSQA+ AS +K KT+ R QEV++A K+KEDR   E +AAVG     GG W        E+++      +GG         G  S S+ A    LL  +EGI  R+KK                                                   ++NRP DS V+KAQT LAK+L++GGK VLLPGL+LRYPQNV ALL+DAAQA +HGLL              +++PLAWT  W+P+Q++DLS N LEGID+LL+V+   G  G   GVV +   A  +S                               + G  RT  V+ LAGL+ELRLNGN LHG+P ++   L SL KLEL GN I EIRAP+
Sbjct:  180 EELRGDGGGNCFGGEDLALGKSLEHDHGFFNHKEDALYRKVEARSTKSSKNKGLGRGGSSGSLAXXXXXXXXXXXXXXXXGRKSGGSSLLKISDSASTSSSVGGXXXXXXXXXXXXXKIN-----------RSASASGGKKDTLKAGLDFD-ALAGSARKINRS-QSLLLVPKQPLSQANMASERKSKTKLRRQEVKKAMKDKEDRCDVEKTAAVGLWQTSGGEWTLAPDKSDESWDARASLANGGDG-------GGHSSSWQAHPNRLLQAEEGILGRIKKLASCYWSRVSLGVPRGFERFLSFATSVPRQQTVVAVAAYHPRIRTLRDTGSEANRPLDSMVRKAQTSLAKALRKGGKLVLLPGLELRYPQNVAALLDDAAQAWEHGLLHPRRGGNNISVASGVKTPLAWTKSWSPIQVMDLSGNDLEGIDSLLMVETLPGVAG---GVVSKDGGAGNQS-------------------------------EAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPR 674          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig74.13987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWK1_ECTSI5.930e-6641.65LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5J7I8_9PHAE5.100e-5740.26Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..202
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 418..532
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 422..530
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 447..468
e-value: 170.0
score: 3.2
coord: 470..493
e-value: 0.11
score: 21.5
coord: 494..516
e-value: 54.0
score: 7.3
coord: 423..446
e-value: 12.0
score: 12.5
coord: 517..544
e-value: 64.0
score: 6.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 472..530
e-value: 4.8E-9
score: 35.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 413..540
e-value: 1.6E-23
score: 84.8
IPR003100PAZ domainPROSITEPS50821PAZcoord: 461..495
score: 9.842

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig74contigP-fluviatile_contig74:497405..501770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig74.13987.1mRNA_P-fluviatile_contig74.13987.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig74 497300..501845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig74.13987.1 ID=prot_P-fluviatile_contig74.13987.1|Name=mRNA_P-fluviatile_contig74.13987.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=545bp
MEELRGDRGSYGYEDLALGKSLDDPFQFNFDSVYRDVDVRTARHTKSKGL
GGRGGGGSSVSLTGKYEAGGGNGNGGGAARSERKASSSGFKINSNSGTSN
GSSRSLGSGGGVGWGGGGKRGGGTNYCKSASAGGGKKGLSKERLNFDGSA
GGGKNRMNRGRQSKLLVRQGSLSQADTASAKKVKTRQRNQEVRRAKKEKE
DRFHAESAAVGGGLWETYNTPEGFIDGGSGGGGGGHYGPSSGSFTALNRL
LLHGKEGIRCRVKKQSNRPSDSNVQKAQTILAKSLQRGGKSVLLPGLDLR
YPQNVRALLEDAAQALQHGLLPAMQSPLAWTSYWAPMQILDLSRNMLEGI
DALLVVDVPAGDGGRGGGVVQETAAAAMKSGDGEGGDGDVGQDWAPGIDG
GGGVAREEPGMKCGEERTRVHLLAGLQELRLNGNQLHGIPWDLTCALSSL
VKLELYGNRIVEIRAPQEPLLRLKHLDLGYNNLLELPAEACAAMPNLERL
LLPNNLLEWLPREVICLEHLKHLDVSKNPLATPRWRWPRGAWTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003100PAZ_dom