prot_P-fluviatile_contig74.13979.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig74.13979.1
Unique Nameprot_P-fluviatile_contig74.13979.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length422
Homology
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: D7FHU3_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU3_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.940e-61
Identity = 112/154 (72.73%), Postives = 128/154 (83.12%), Query Frame = 0
Query:   97 SEEKIKELEESV----LKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTEEGDKERVARTVHTKGYNKDAKITIEDVEKLFAEAGKARYVKICKASKGTKL 246
            SE+K KE E +     LKM+EFYFGDSNFGWDRF+Q+KAGKMGE L+DISVL+TFNKLK +VK A LS E+G ALIAR+GEASP+LRVSEDKKQIGRA  MTEE  KER+ARTV TKGY K++ I IEDVEKLF++AGKA YVKICKA  G KL
Sbjct:   41 SEDKGKEAETAAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAG-GNKL 193          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: D7FZL9_ECTSI (XRRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.900e-43
Identity = 88/159 (55.35%), Postives = 120/159 (75.47%), Query Frame = 0
Query:  249 IFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQRSGEKSDKTPTPEEPVVYDAGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEGSKE-GGLELAPGVEQKGTVSLVDGAEEKAYYERLEQQRADKFSR 406
            IFVEF+ KE AEKA+  S+   +EG+ I VR  +S ++R+   +   P   EP+VY+AGKI+H+  +PESGVSRESL++AV++FGT  YVDF+FG REA++RM N +EAAA + G+KE  GL LA  VE KGTVSLV+GAEEK YY+R+E+ RA++ +R
Sbjct:  109 IFVEFDKKEAAEKAIARSEDYFYEGEPIAVRPARSDEERAAAHTAPAP---EPLVYEAGKIIHIAGIPESGVSRESLKNAVESFGTALYVDFSFGGREAWIRMQNPAEAAATVSGAKETDGLTLAAEVEDKGTVSLVEGAEEKDYYDRMEKMRAERLNR 264          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: A0A482RX93_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX93_9ARCH)

HSP 1 Score: 114 bits (284), Expect = 1.010e-24
Identity = 107/346 (30.92%), Postives = 171/346 (49.42%), Query Frame = 0
Query:  106 ESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTEEGDKERVARTVHTKGYNKD-AKITIEDVEKLFAEAGKARYVKIC----KASKGTKLTG-IFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQRS---------------------------------GEKSDKTPTPEEPVVYDAGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEGSKEGGLELAPGVEQKGTVSLVDGAEEKAYYERLEQQ-RADKFSRSNNRG 411
            +++ K VEFYF DSN+  D FL++ A    +  V ISVLLTFN+LK +  D        VA +A+  E+S  + +S +K ++ RAEP+ E    E  +RT++ KGY  D A +TIE + + ++  GK  YVK+     + +   K  G + VEF + E  +KAV  S     +G +I     K F Q S                                   + DK  T E    Y+ G ++ + DLP +    E L++ ++    VR+VD+T GA +A++R  +A  A  V E   +G ++     E +G   +++G  EKAY+ + +   +A + SR+NN+G
Sbjct:    6 DAIRKQVEFYFSDSNYRKDTFLKAAAESDPDGFVAISVLLTFNRLKNLTTD--------VAEVAKAVESSDAVVLSANKDKVKRAEPLPETD--ESASRTLYIKGYPVDNADVTIESIAEQWSPYGKVLYVKMRTFRDRDTNARKFKGSVCVEFASTEGVDKAVAAS---KEDGKIILGFEDKKFVQVSTFAEWYNSKKAYLESKKGKAQKRXXXXXXXXXXDNEGDKEETRE--FKYENGLVVKLTDLPATHNGVE-LKELLRQTADVRFVDYTNGASDAFVRCGDAGAARKVAEAVNKGEVKFG---EAEGKAEVLEGEGEKAYWVKNDADFKARRESRNNNKG 332          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: A0A1X7UCM2_AMPQE (Uncharacterized protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UCM2_AMPQE)

HSP 1 Score: 114 bits (284), Expect = 2.890e-24
Identity = 91/353 (25.78%), Postives = 170/353 (48.16%), Query Frame = 0
Query:   85 EKAGGEAAPAPLSEEKIKELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLS--------------NEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTEEGDKERVARTVHTKGYNKDAKITIEDVEKLFAEAGKARYVKICKASKGTKLTGIFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKS-FDQRSGEKSDK-------------TPTPEEP----VVYDAGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEGSKEGGL--ELAPGVEQKGTVSLVDGAEEKAYYERLEQQRADK 403
            E  G +   A  S  +  +LE+ +++ +EFYFGD N   D+FLQ+K  +  +  V++SVLLTF++LK +  D  L               +EDG+ +  +  +  PTL +            ++ E  K+   RT++ KG+ KD+  T++D++      G+   +++ K         IFVE++  +   K +E    L ++ +++TV   +  F ++  E+ +K             T T ++      +   G ILH     + G +RE+L++  + F TV +VDF  G  E Y+R D    A    +G+       E+    +   T+ +++G EE AY+E++++ +A++
Sbjct:    3 ESTGDDVPSASTSSSEPDDLEKKIIRQIEFYFGDRNLSRDKFLQNKIKENEDGWVELSVLLTFSRLKALSTDCSLIAGALRKSTSGLLEVSEDGLKVKRKSSDPVPTLSL------------LSPEDRKDMSNRTLYMKGFPKDS--TLDDIQDFLLPFGETEMIRMKKDLDKQFKGSIFVEYKLVDSISKVLEKKAELKYKDELLTVETKQDYFKRKDAERKEKKAQSRVESSSGSATETSKDTNGTTFIRQEGAILHFTGCGD-GTTRETLKEYFRQFATVAWVDFQKGDTEGYIRFDEDGGAKKAYDGAMANVPTGEVCKICDSDVTLKVLEGEEESAYWEKMKEDQANR 340          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: A0A835Z2D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D4_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.340e-22
Identity = 85/275 (30.91%), Postives = 132/275 (48.00%), Query Frame = 0
Query:   99 EKIKELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTEEGDKERVARTVHTKGYNKDAK-ITIEDVEKLFAEAGKARYVKICKASKGTKLTGIFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQ----------RSGEKSDKTPTPEEPVVYDAGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLE 362
            E   EL   V + +EFYFGDSNF  D+FL+ +     + LV ++VL+TFNKLK+M  D         A++    + S  L VSED  ++GR +  TE     R  RT++ KG+  D   ++IE V  +F   G+  YV I +         + VEF+ +  A K +    TL + G  ++  L  S+++          R G+++       +P  ++ G    +  LP  GV    LRD+++ FG   YVD   G  E +LR     +A  V +
Sbjct:   86 EATPELLAKVQRQLEFYFGDSNFNRDKFLREQVKLSEDSLVPLTVLMTFNKLKSMTADE--------AVVLAAAKQSEVLSVSEDGLRVGRGDGATELRYDAR-PRTIYAKGFGYDCPDLSIEFVTDMFKVFGEVGYVYIRRTMDKKAKGSVLVEFKEEASALKCLINRGTLVYNGQRLSKVL--SYEEYLEDREKERARKGKRAGGADDQSQPPKFEPGSTFKITGLPAEGVDFAFLRDSIEPFGASPYVDTAKGLAEGHLRFRTTEDANKVYD 349          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: A0A6H5JNF3_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF3_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.370e-22
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  101 IKELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIG 188
            +KE E + LKM+EFYFGDSNFGWDRF+Q+KAGKMGEKL+DISVL+TFNKLK +VK A LS E+  AL++ +  A     VS    Q G
Sbjct:  222 VKEAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGEKLMDISVLMTFNKLKNIVKKADLSPEEAQALVSYVQTAPLHQEVSSSFGQAG 309          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: A0A3M7T006_BRAPC (Lupus La n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7T006_BRAPC)

HSP 1 Score: 106 bits (265), Expect = 5.630e-22
Identity = 94/316 (29.75%), Postives = 159/316 (50.32%), Query Frame = 0
Query:  103 ELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTE---EGDKERVARTVHTKGYNKDAKITIEDVEKLFAEAGKARYVKICKASKGTKLTG-IFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQRSGEKSDKTPT------------------PEEPVVYD---AGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEGSKEGGLELAPGVEQKGTVSLVDGAEEKAYY 393
            EL+E ++K +E+YFGD N   D FLQ +  K     V +  ++ FN+LK +  D        V + A     S  L + E+KK+I RA+P+ E   E +      TV+ KG+  D+++T++D+   F E GK  ++ + +     +  G +FV FET EQ  K ++L + + ++  VI+  L + + +R     +K                      EE  V +   AG ILHV +LP++  +RESL++    +  V+Y+DF  G  E Y+R    ++A  V E   E  L++   V +   + +++G EE+AY+
Sbjct:    6 ELDEKIIKQIEYYFGDINLSKDTFLQEETQK-DSGWVHLETMVKFNRLKQLATDFQ------VIVDALKKSKSNLLEIDEEKKKIRRAKPLPENLSEFETNIKQNTVYAKGF--DSQMTLDDLFSFFEEHGKILHIFMRRFPATKEFKGSVFVTFETNEQMRKFLDLEE-VKYKDTVISRELQEDYLKRKAPVLEKIKENKAXXXXXXXXXXXXXQEAEEAYVKEQQVAGAILHVKNLPDNA-TRESLKELFDIYAKVKYLDFNRGQSEGYVRFCEENKAKEVFEQVDE--LKMNDNVLE---IRVLEGEEEQAYW 305          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: A0A813UGS3_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813UGS3_9BILA)

HSP 1 Score: 103 bits (258), Expect = 6.100e-21
Identity = 96/323 (29.72%), Postives = 158/323 (48.92%), Query Frame = 0
Query:  103 ELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTE---EGDKERVARTVHTKGYNKDAKITIEDVEKLFAEAGKA-----RYVKICKASKGTKLTGIFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQRSG---EKSDKTPTPEEPVVYDA------------------GKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEGSKEGGLELAPGVEQKGTVSLVDGAEEKAYYERL 396
            ELEE ++K +E+YFGD N   D+FLQ +  K     V +  ++ FN+LK       LS +  V L A     S  L + E+ K+I RA+P+ E   E +      TV+ KG+  +  +T++++   F + GK      R +   K  KG+    +FV FET EQ +  ++L + + H+ +V+   L + + +R G   EK  +    +E                        G ILHV +LP S  +RESL++       V+YVDF  G  E ++R +  ++A  VLE  K G ++L   V +   + +++G EE+ Y+  +
Sbjct:    6 ELEEKIIKQIEYYFGDINLSKDKFLQEETQKESG-WVPLETMIKFNRLKQ------LSTDHQVILDALKKSTSELLEIDEENKKIRRAKPLPENLSEFETNLKQNTVYVKGFAPE--MTLDELYGFFEQHGKVLQIFMRRLPATKQFKGS----VFVTFETNEQMKAFMDLEE-VKHDDNVLQRELQEDYLKRKGPQFEKFKEAKAKKEAXXXXXXXXXXXXXXXYLKEQQVLGAILHVKNLP-SDATRESLKELFDNHAKVKYVDFNKGQIEGFVRFNEENQAKQVLE--KAGEIKLKDSVLE---LRVLEGEEEQNYWREI 308          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: UPI00077FD00B (lupus La protein homolog n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077FD00B)

HSP 1 Score: 102 bits (253), Expect = 3.310e-20
Identity = 93/347 (26.80%), Postives = 170/347 (48.99%), Query Frame = 0
Query:   88 GGEAAPAPLSEEKIKELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEA-SPTLRVSEDKKQIGRAEPMTEEGDK-ERVARTVHTKGYNKDAKITIEDVEKLFAEAGKARYVKICKASKGTKLT---GIFVEFETKEQAEKAVELSDTLSHEGDVI----------------TVRLTKSFDQRSGEKSDKTPTPEEPVVYDAGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEGSKEGGLELAPGVEQKGTVSLVDGAEEKAYYERLEQQRADKFSRSN-NRGR 412
            G E  P P ++EK  ELE+ V++ +E+YFG+ N G D+FL+ +  K  +  V +  ++ F +LK M       N D   + A L ++ +  + VS+D  +I R  P+ E  D+ E   R+++ KG+ ++   T++ V   F +  K   V + K  +G K      +F  FET+   +   E       + +++                 +R  K+  + +GEK DK  TP+       G +L ++ + +  + R+ +R A++ +G V +VDF  G  +A +R      +  + +  +E G++       K T+SL+DG EE  Y+E+++     K ++ N N+GR
Sbjct:    2 GTEVIPVPENQEKPSELEQKVIRQIEYYFGNYNLGRDKFLKEEL-KKDDGWVPLETMVRFQRLKQM-------NVDFETISAALKKSPNQLMEVSDDCTKIRRRAPVPENVDRGEMDDRSLYVKGFKRET--TLDQVLDFFKDY-KVENVMMRKRRQGDKFFFKGSVFATFETQADCDSFFEKKGIKFDKTEMLKERKKDYVKRKDEFFENLRAEKAKKKEAGEK-DKEDTPK-------GCLLKIIGITDESIKRDDVRKAMEEYGNVAFVDFFAGNTDAVIRFKEGIVSELLSKLEEEDGVKKLQIGSVKATLSLIDGEEETKYWEKIKSFSKQKGNQKNFNKGR 329          
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Match: UPI000719D8C8 (lupus La protein-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D8C8)

HSP 1 Score: 95.9 bits (237), Expect = 6.400e-18
Identity = 99/345 (28.70%), Postives = 177/345 (51.30%), Query Frame = 0
Query:   99 EKIKELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKLKTMVKDAGLSNEDGVALIARLGEASPTL-RVSEDKKQIGR--AEPMTEEGDKERV---ARTVHTKGYNKDAKITIEDVEKLFAEAGKARYVKICKASKGTKLTGIFVEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQRSGEKSD---------KTPTPEEPVVYDA---GKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLRMDNASEAAAVLEG---SKEGGLELAPGVEQKGTVSLVDGAEEKAYYERLEQQRADKFSRSNNRGRG----GRGGK 418
            E+  ELE+ +++ +E+YFGDSN   DRFLQ +  K+ +  + +  ++ FN+LK + +D  L         + + +A   L  VSED  +I R  ++P+ E  ++ R    AR ++ KG+  D  ++++DV     + G    V + +  +      IF  FETKE A+  +E ++  + E +++ +     F++++ EKS          K P  +   + D    G ILH+        +RE +++ +   GTV +VDF+ G  EA++R     +A  VLE    + EG L +    E +G  S+++G EE  +++++  ++A+   R   RGRG    GRGG+
Sbjct:   18 EEPTELEQKIIRQIEYYFGDSNLSRDRFLQEQI-KLDDGWIPLDTMVKFNRLKAISEDISL-------YASAMKKAKRQLVEVSEDCLKIRRFPSKPLPENTEERRADIKARNIYAKGFPLD--MSLDDVVVFLEKYGPVESVAMRRTIERKFKGSIFALFETKEAAKSFLECTEKFN-ENELLRLSKEGYFNKKNAEKSKMKTKPAGDKKEPDNDFSGIQDKIEFGMILHLTGFAAES-TREHIKELLTPHGTVAWVDFSKGDSEAWVRFTGDHKAQEVLEKVTTAGEGKL-IVNDSELQG--SVLEGDEETTHWKQILAKQAEGRDRKRQRGRGRRDQGRGGR 347          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig74.13979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHU3_ECTSI1.940e-6172.73HTH La-type RNA-binding domain-containing protein ... [more]
D7FZL9_ECTSI1.900e-4355.35XRRM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A482RX93_9ARCH1.010e-2430.92Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A1X7UCM2_AMPQE2.890e-2425.78Uncharacterized protein n=3 Tax=Amphimedon queensl... [more]
A0A835Z2D4_9STRA1.340e-2230.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JNF3_9PHAE2.370e-2261.36HTH La-type RNA-binding domain-containing protein ... [more]
A0A3M7T006_BRAPC5.630e-2229.75Lupus La n=1 Tax=Brachionus plicatilis TaxID=10195... [more]
A0A813UGS3_9BILA6.100e-2129.72Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI00077FD00B3.310e-2026.80lupus La protein homolog n=1 Tax=Parasteatoda tepi... [more]
UPI000719D8C86.400e-1828.70lupus La protein-like n=1 Tax=Priapulus caudatus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002344Lupus La proteinPRINTSPR00302LUPUSLAcoord: 111..128
score: 52.53
coord: 245..263
score: 32.54
coord: 198..214
score: 29.41
coord: 137..152
score: 31.25
IPR006630La-type HTH domainSMARTSM00715lacoord: 102..190
e-value: 4.1E-12
score: 56.2
IPR006630La-type HTH domainPFAMPF05383Lacoord: 109..156
e-value: 1.8E-11
score: 43.9
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 98..197
score: 18.687
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 205..279
e-value: 0.012
score: 23.6
coord: 309..376
e-value: 1.1
score: 6.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 217..265
e-value: 2.8E-6
score: 27.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 204..283
score: 10.991
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 196..288
e-value: 9.9E-10
score: 40.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 291..412
e-value: 7.5E-21
score: 76.1
IPR014886La protein, RNA-binding domainPFAMPF08777RRM_3coord: 317..412
e-value: 6.4E-14
score: 51.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 101..195
e-value: 2.6E-20
score: 74.0
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 98..421
NoneNo IPR availablePANTHERPTHR22792:SF118LUPUS LA PROTEIN HOMOLOGcoord: 98..421
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 100..194
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 216..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig74contigP-fluviatile_contig74:424940..435545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig74.13979.1mRNA_P-fluviatile_contig74.13979.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig74 424939..435545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig74.13979.1 ID=prot_P-fluviatile_contig74.13979.1|Name=mRNA_P-fluviatile_contig74.13979.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=422bp
PEDNGAAAPAAGAGSDVAEPAVKKLKATDGDATTAEPAPDAATTAAVVAV
APAAAAAAVLAETSAATVPSATEDTKDEAKPVKEEKAGGEAAPAPLSEEK
IKELEESVLKMVEFYFGDSNFGWDRFLQSKAGKMGEKLVDISVLLTFNKL
KTMVKDAGLSNEDGVALIARLGEASPTLRVSEDKKQIGRAEPMTEEGDKE
RVARTVHTKGYNKDAKITIEDVEKLFAEAGKARYVKICKASKGTKLTGIF
VEFETKEQAEKAVELSDTLSHEGDVITVRLTKSFDQRSGEKSDKTPTPEE
PVVYDAGKILHVVDLPESGVSRESLRDAVKAFGTVRYVDFTFGAREAYLR
MDNASEAAAVLEGSKEGGLELAPGVEQKGTVSLVDGAEEKAYYERLEQQR
ADKFSRSNNRGRGGRGGKRGRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002344Lupus_La
IPR006630La_HTH
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR014886La_RRM
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
IPR035979RBD_domain_sf