prot_P-fluviatile_contig73.13954.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig73.13954.1
Unique Nameprot_P-fluviatile_contig73.13954.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length90
Homology
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BLAST of mRNA_P-fluviatile_contig73.13954.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.060e-35
Identity = 67/90 (74.44%), Postives = 74/90 (82.22%), Query Frame = 0 
Query:    1 IEWEVSAPWAPVNPPATIQLAAGKRVIIFHDLHGQRSVPTALPGELVELVEDGKLTKTGAGIKGDCTRLANSCGLQVTPVVDLRSLAVER 90
            IEWE+SA  AP NPPATIQLAAGKRV+IFH LHGQRSVP  LP  LV+L+ED KLTKTG GIKGDCTRL +  G++V   VDLRSLAVER
Sbjct:  258 IEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVER 347
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig73.13954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE5.060e-3574.443'-5' exonuclease domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..90
e-value: 9.1E-14
score: 53.0
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 2..88
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig73contigP-fluviatile_contig73:627893..628162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig73.13954.1mRNA_P-fluviatile_contig73.13954.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig73 627893..628162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig73.13954.1 ID=prot_P-fluviatile_contig73.13954.1|Name=mRNA_P-fluviatile_contig73.13954.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=90bp
IEWEVSAPWAPVNPPATIQLAAGKRVIIFHDLHGQRSVPTALPGELVELV
EDGKLTKTGAGIKGDCTRLANSCGLQVTPVVDLRSLAVER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf