prot_P-fluviatile_contig73.13951.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig73.13951.1
Unique Nameprot_P-fluviatile_contig73.13951.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length854
Homology
BLAST of mRNA_P-fluviatile_contig73.13951.1 vs. uniprot
Match: A0A6H5JZC9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC9_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 3.970e-75
Identity = 351/911 (38.53%), Postives = 420/911 (46.10%), Query Frame = 0
Query:   24 KHHKGWKARENPSAQDSGGCFPLRE---------AHNHKDNSDGKSLGPFDAPYASN------ARTVVAACASS---KAPDGRNEKRVILRC-----------------------------------MYTNQKTKKRKTWSDGAVKCCPTSQRVSLYRWSEALGVTHKLLGDMYLTVPQYEAFVKQDEPELEMEVYIVSLDGVTQPGGDPPNIGAATSTHAAGSAGXXXXXXXXXXXXXXXXXXXXXGRKRKLFKVFRPPARRAPVPAPPLPEEVAWGLPPPGGMGRLRNGGERNDGGHWPASGGVXXXXXXRESSCPRASYTGFGHVESLSDDDEESGEGGGDYERGRRRPRGMGAGSAGLAAVGGNAGWGIVAGVDHSSGASYDG--DSGRESSVLPRAWPLGALTQHEERMQQTPPAAAAATNPNDWMRGQEDRRHLEVRGGGESSGPSRWSRSFSQ-----PDERLQLSRAAAATXXXXXXXXXXEDFAGQLDSSSYGAPAHDDDRDDPSPDLQSLLRSGGGPRLHIPASRGGARGTGEAGSHDGRYRSGSPQQHDGAGPVAWAGG-GGAEEGPPVFDATSEYGGGVRSPEFSRGSADSSESXXXXXXXXARM--RSTQDILSLFGGF---EQKYGG---AQSPREPGWPRTIGSPLKQLIDAPAGPEATRGTLLPIGGXXXXXXXXXXXXXXXXXXXXXAAVTARVAAHAEIAREVCAASATDAV-GDIVASPQAGWTCGVCGVRGGPSSKSCRVCGAERQVRLPSGGNGDFQGDDGLRG-----RGGVDFDRGT--GWQERGRKGAAGNQAAAADGLGDGEGGPSVGGVEVAPHERHGGAELGKRG----STSPRPISHMSGAAAAEGPGSSSAGGAARASSEHWMVAGVRMQMDVGSSPDSDDA 853
            +HH+GW+ARE  ++   G   P RE         A N +  S  KSL P D PYA+         T     AS+   K P G ++K ++LRC                                   MYTNQKTKKRKTWSDGAVKCCP  QRVSLYRWSEALGVT KLLG++YLTVPQYEAF+ Q EPELEME+YIVSLDGV Q   +      A          XXXXXXXXXXXXXXXXXXXXX +KRK+FK F+PPARR P PAP  P++ +WG  PPGG+  LR  G+R   G +P++ G            PR +YTGFGHVESL D+DEE  +G   +E G           AGLA     AGWG+      ++G  Y    D G ES VL +A    A+     R   T    +A  + N WM G     H          GP R SRS +      P ++ Q  R                   G+ D ++   P H  + D PS  L+ L R   G        R        + SH   Y        DGA  V  AGG GG EE    F   +  GG         GS  S E         ARM  RSTQDILSLFGGF       GG    +  RE     T  S  +   +AP G +A+   L+P+GG                  XXX      VA     A     AS  DAV GD        W CG CGVRGG SS SCRVCGA+RQ  L S G     GDDG+RG      G V + RG   G  ER +K A   +A      GD    P + G+         G E G  G    S+  RP    SGA    G G  + GG+   +       G RMQMD+GSS DSD+A
Sbjct:   21 QHHRGWQARERTAS--GGARSPSRESPASNRDGSAANPRKASSSKSLRPHDIPYATGNSYAAAVNTTAGTTASAEPGKVPGGIDDKGIVLRCVDTGRPGYVCVETTANRVRFFLSDVALLPAVLPRCMYTNQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTEKLLGEVYLTVPQYEAFITQGEPELEMELYIVSLDGVIQSDDN------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRKIFKAFKPPARREPTPAP-QPDD-SWGRLPPGGVS-LRGNGDRGGDGRFPSNRGGGKLS-------PRTTYTGFGHVESLWDEDEEEDDGQDRHEDG-----------AGLADEH-RAGWGMGG----AAGPGYQNPYDVGNESDVLQQARSEAAVQPPYHRSTGT----SAVGSTNTWMWGPPAGEHS-------LDGPLRPSRSTADFASGSPAQQQQQER-------------------GRHDETAV--PGHHGE-DGPSSYLERLRR---GNDDDDDVGR-------RSASH---YPENQRCGRDGA--VTAAGGTGGREEN--TFGRGNAIGG--------AGSRVSEEVDRETPGDGARMEMRSTQDILSLFGGFGGTPSTQGGHDHGEQERE-----TAESQWRGPTEAPLGSQASGDALMPVGGGIRRAVDMRRTQKEARAAXXXXXXXXXVAGAVTGAASARGASNDDAVTGD--------WACGTCGVRGGSSSASCRVCGAKRQ-ELRSDGVAQG-GDDGVRGGIGSQEGRVGWGRGDDFGGGERPQKKALEGRA------GDVGDRPVILGIAE-------GLEAGAPGRWRTSSPDRPAFPQSGAG---GGGEGAFGGSVLETPSSCRKIGHRMQMDMGSSSDSDEA 808          
BLAST of mRNA_P-fluviatile_contig73.13951.1 vs. uniprot
Match: D8LRG4_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG4_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 4.700e-37
Identity = 82/126 (65.08%), Postives = 93/126 (73.81%), Query Frame = 0
Query:   56 SDGKSLGPFDAPYA---SNARTV------VAACASSKAPDGRNEKRVILRCMYTNQKTKKRKTWSDGAVKCCPTSQRVSLYRWSEALGVTHKLLGDMYLTVPQYEAFVKQDEPELEMEVYIVSLDG 172
            S  KSL P+D PYA   SNA  V       A+  + K P G ++K ++LRCMYTNQKTKKRKTWSDGAVKCCP  QRVSLYRWSEALGVT KLLG++YLTVPQYEAF+ Q EPELEME+     DG
Sbjct:   39 SSSKSLRPYDIPYATGNSNAAAVNTTAGTAASAEAGKVPGGIDDKGIVLRCMYTNQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTEKLLGEVYLTVPQYEAFITQGEPELEMELLRRGDDG 164          
BLAST of mRNA_P-fluviatile_contig73.13951.1 vs. uniprot
Match: A0A835YK32_9STRA (DUF2439 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK32_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.300e-22
Identity = 52/93 (55.91%), Postives = 71/93 (76.34%), Query Frame = 0
Query:   83 KAPDGRNEKRVILRCMYTNQKTKKRKTWSDGAVKCCPTSQRVSLYRWSEALGVTHKLLGDMYLTVPQYEAFVKQDEPELEMEVYIVSLDGVTQ 175
            +AP+G   +R +LRC++T+Q TKKRKTW DGAV+CC     V+LY+WS+ LGVT K LG+ +L   ++ AFV Q EPELEME Y+V+L+GVT+
Sbjct:    2 QAPNG---ERQVLRCLFTSQLTKKRKTWQDGAVRCCAKRLSVTLYKWSDTLGVTEKTLGESFLNAAEFNAFVTQKEPELEMEKYLVTLEGVTE 91          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig73.13951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZC9_9PHAE3.970e-7538.53RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D8LRG4_ECTSI4.700e-3765.08RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A835YK32_9STRA2.300e-2255.91DUF2439 domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018838Domain of unknown function DUF2439PFAMPF10382DUF2439coord: 96..171
e-value: 3.4E-10
score: 40.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig73contigP-fluviatile_contig73:584226..587764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig73.13951.1mRNA_P-fluviatile_contig73.13951.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig73 583844..587865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig73.13951.1 ID=prot_P-fluviatile_contig73.13951.1|Name=mRNA_P-fluviatile_contig73.13951.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=854bp
MGRSWLGMNEGRGSTEENLEGESKHHKGWKARENPSAQDSGGCFPLREAH
NHKDNSDGKSLGPFDAPYASNARTVVAACASSKAPDGRNEKRVILRCMYT
NQKTKKRKTWSDGAVKCCPTSQRVSLYRWSEALGVTHKLLGDMYLTVPQY
EAFVKQDEPELEMEVYIVSLDGVTQPGGDPPNIGAATSTHAAGSAGGPPA
GITAAGYSSGGGAGGGAGRKRKLFKVFRPPARRAPVPAPPLPEEVAWGLP
PPGGMGRLRNGGERNDGGHWPASGGVGGGGGGRESSCPRASYTGFGHVES
LSDDDEESGEGGGDYERGRRRPRGMGAGSAGLAAVGGNAGWGIVAGVDHS
SGASYDGDSGRESSVLPRAWPLGALTQHEERMQQTPPAAAAATNPNDWMR
GQEDRRHLEVRGGGESSGPSRWSRSFSQPDERLQLSRAAAATAAATAAEA
AAEDFAGQLDSSSYGAPAHDDDRDDPSPDLQSLLRSGGGPRLHIPASRGG
ARGTGEAGSHDGRYRSGSPQQHDGAGPVAWAGGGGAEEGPPVFDATSEYG
GGVRSPEFSRGSADSSESAGGGGGGGARMRSTQDILSLFGGFEQKYGGAQ
SPREPGWPRTIGSPLKQLIDAPAGPEATRGTLLPIGGGGSSRAAMRRTQK
DARAAAGGAAVTARVAAHAEIAREVCAASATDAVGDIVASPQAGWTCGVC
GVRGGPSSKSCRVCGAERQVRLPSGGNGDFQGDDGLRGRGGVDFDRGTGW
QERGRKGAAGNQAAAADGLGDGEGGPSVGGVEVAPHERHGGAELGKRGST
SPRPISHMSGAAAAEGPGSSSAGGAARASSEHWMVAGVRMQMDVGSSPDS
DDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018838DUF2439