prot_P-fluviatile_contig73.13947.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig73.13947.1
Unique Nameprot_P-fluviatile_contig73.13947.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1179
Homology
BLAST of mRNA_P-fluviatile_contig73.13947.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 1.020e-112
Identity = 405/831 (48.74%), Postives = 475/831 (57.16%), Query Frame = 0
Query:   92 GAVELTGPLVVAADSTLTITGARGSGGGSEGPQTAAVLDGGGLTGLVDLGAGSSLRLEDVTLRNGRRESGNGGAVRAEGAGCSVVAFSSRFEDNAAALSSNWGGGGGMGGALSLGSGVTAELENCVLSGNHAEDSGGAVWSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSTVVLDGSTFSKNFAVEEGGGVYGVNATVEVSGKSEFVDNTVGQAGA-GISLHEGSDLNISETIFRRNWLVLTNTSNAHGSGGGVRVIGGSSRMARVSIADTLFDDNFATHGAGLWISSGYVLSAVRTIFRDNEANSLMVAAAFGGGASLGSDGVAELSACNFTGNYAFNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAIVTLQRSAFVDNYISG-GGVGSGGAIVVSRATLRATDSVFDSNRAIQEDSEYDINADPLEGGGAVKLADMANATFSGCNFTLNHAAVGGAVLVDGASTATLTGAVVTSNQAVAYGGGLSFHERSFCFMNDSFMGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNMTVTGGGFASNSASRSGGHVLATNAGTNVELISSSXXXXXXXXXXXAERGLQAGELPTSPLPSPLVLAYGHAGVHGGAVHASDGAAVTAFSVELSRNRAERNGGAVSALGARLVRLDDCNTTANICGGGGGGASVEDGAFVGAGSNFTLNSAVADGGGLRVFSGARVELEDCQFNGNSAQVGGGVSSVDATLLATRCQVTGNXXSSDGGGLRVAYQTSAVLDSXXXXXXXXXXXXXXXXXDASSGTTGDNLNASNASSTLTCRGRHLRGQSGG 920
            G V L  PLVVAA S+L I G  G+ G      + A +DGGG+TGLVDLG GSSLRLE VTLRN  R SGNGGA+RAE  GCSVVA  S FE N AA S       G GGAL+LG G +AEL+NCV+SGNHA+ SGGA  +Q  XXXXXXXXXXXXXXXXXXXXX     GRSTV LDGST  +                                    GISL   S+L +S++ F  N+     T    G GGGV++IG S     +SI D+LF+ N AT G GL+ISS YVL+  RT+F DN      VA  FGGGA L S+GVA LS+ NFTG +A+N XXXXXXXXX                        E A V+L  + F +N+IS   G GSGGA+ VS  TL ATD  F++N+A  +D  YD+  DPLEGGGAV ++D +N              VGGA+L +G+STATLT    TSNQA  YGG LS +E S C MN S    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +N TVTGG F++N+A+ +GGHV+A +A TNVEL+  +                 A         +PLVL+ G AG  GGAVHA  G                                                  V D  FVG G+NF            R F+GA V LE C  +GN+AQ+GGGVSSVDA+L          XX +DGGGLR +Y +  VLD+XXXXXXXXXXXXXX   DASSGT  DNLNA+NASS L CRG    G   G
Sbjct:   31 GGVALAEPLVVAAASSLWILGEPGADG------SPAAIDGGGVTGLVDLGEGSSLRLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLE---GRGGALALGGGGSAELDNCVVSGNHAQQSGGAFSTQGDXXXXXXXXXXXXXXXXXXXXXGVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRT---FGLGGGVKIIG-SYATTTISITDSLFEGNSATDGGGLYISSDYVLTVSRTVFHDN------VAGFFGGGAVLESNGVAALSSSNFTGGFAWNXXXXXXXXXXRVSISDCLFEGNSNKFAGGAIRVEEEAAVSLSGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQAFHDD-RYDVETDPLEGGGAVIISDGSN--------------VGGALLAEGSSTATLTNVAFTSNQAGVYGGALSIYEESVCLMNASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNATVTGGLFSTNTATDTGGHVVAADAHTNVELLPDA-----------------AAASGVGTTATPLVLSGGEAGTDGGAVHAYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGTNFXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAQLGGGVSSVDASLAXXXXXXXXXXXFTDGGGLRASYLSKVVLDTXXXXXXXXXXXXXXVALDASSGTDNDNLNAANASSALDCRGGTFEGNHAG 810          
BLAST of mRNA_P-fluviatile_contig73.13947.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 4.560e-86
Identity = 384/962 (39.92%), Postives = 452/962 (46.99%), Query Frame = 0
Query:   50 IPPCPIPLASGGVYTVSLPRDAADLATDLASCTGGAYNVTWTGAVELTGPLVVAADSTLTITGARGSGGGSEGPQTAAVLDGGGLTGLVDL-------------------------------------------------------GAGSSLRLEDVTLRNGRRESGNGGAVRAEGAGCSVVAFSSRFEDNAAALSSNWGGGGGMGGALSLGSGVTAELENCVLSGNHAEDSGGAVWSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSTVVLDGSTFSKNFAVEEGGGVYGVNATVEVSGKSEFVDNTVGQAGA-GISLHEGSDLNISETIFRRNWLVLTNTSNAHGSGGGVRVIGGSSRMARVSIADTLFDDNFATHGAGLWISSGYVLSAVRTIFRDNEANSLMVAAAFGGGASLGSDGVAELSACNFTGNYAFNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAIVTLQRSAFVDNYISG-GGVGSGGAIVVSRATLRATDSVFDSNRAIQEDSEYDINADPLEGGGAVKLADMANATFSGCNFTLNHAAVGGAVLVDGASTATLTGAVVTSNQAVAYGGGLSFHER--------------------------------SFCFMNDSFMGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SNMTVTGGGFASNSASRSGGHVLATNAGTNVELISSSXXXXXXXXXXXAERGLQAGELPTSPLPSPLVLAYGHAGVHGGAVHASDGAAVTAFSVELSRNRAERNGGAVSALGARLVRLDDCNTTANICGGGGGGASVEDGAFVGAGSNFTLNSAVADGGGLRVFSGARVELEDCQFNGNSAQVGGGVSSVDATLLATRCQVTGNXXSSDGGGLRVAYQTSAVLDSXXXXXXXXXXXXXXXXXDASSGTTGDNLNASNASSTLTCRGRHLRGQSGG 920
            +P C      G  Y VS   DAADLA  +  CTGGAYNVTWTGAV L  PLVVAA S+L I GA G+ G      + A +DGGG+                                                             G G    LE VTLRN  R SGNGGA+RAE  GCSVVA  S FE N AA         G GGAL+LG G +AELENCV+SGNHA+ SGGA  +Q  XXXXXXXXXXXXXXXXXXXXX     GRSTV LDGST  +                                    GISL   S+L +S++ F  N+     T    G GGGV++IG S     +SIAD+LF+ N AT G GL+ISS Y L+  RT+F DN      VA  FGGGA L S+GVA LS+CNFTG +A+N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         S F++N+IS   G GSGGAI VS  TL  TD  F++N+A  +D  YD+  DPLEGGGAV ++D +NATF  CNFTLN  AVG                                                                      F+ +S  G                                             +N TVTGG F+SN+A+ +GGHV+A +A TNVEL+  +           A  G +  E       + LVL+ G AG  GGAVHAS                                                    V D  FVG G+              R F+GA V LE C  +GN+A++GGGVSSVDA+L          XX +DGGGLR +Y +  VLD XXXXXXXXXXXXXX   DASSGT  D L+A+NASS L CR     G   G
Sbjct:   98 LPACASSPTGGETYAVSSAADAADLAVAVGGCTGGAYNVTWTGAVTLEEPLVVAAASSLWILGAPGADG------SPAAMDGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGG----LEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASIIYLE---GRGGALALGGGGSAELENCVVSGNHAQQSGGAFSTQGDXXXXXXXXXXXXXXXXXXXXXGVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLGNYYFGDRT---FGIGGGVKIIG-SYATTTISIADSLFEGNSATDGGGLYISSDYALTVSRTVFHDN------VAGFFGGGAVLESNGVAALSSCNFTGGFAWN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTFLNNFISSQSGAGSGGAISVSAGTLIGTDCNFENNQAFHDD-RYDVETDPLEGGGAVIISDGSNATFLDCNFTLNGGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDGVAFVGNSVSGGRINIDTILVSAYKRPVPLNTLRLSRTNVLSPTNISGGAVFFSLGTNATVTGGLFSSNTATGAGGHVVAADAHTNVELLPDA-----------AASGAETAE-------TSLVLSGGEAGTDGGAVHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGTXXXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAKLGGGVSSVDASLXXXXXXXXXXXXXTDGGGLRASYLSKVVLDXXXXXXXXXXXXXXXVALDASSGTDNDVLSAANASSALDCRSGTFEGNRAG 1016          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig73.13947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRF9_ECTSI1.020e-11248.74Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JU65_9PHAE4.560e-8639.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 213..234
e-value: 890.0
score: 7.6
coord: 143..170
e-value: 1900.0
score: 5.2
coord: 295..316
e-value: 9800.0
score: 0.1
coord: 356..381
e-value: 5100.0
score: 2.2
coord: 622..644
e-value: 270.0
score: 10.3
coord: 863..889
e-value: 9600.0
score: 0.2
coord: 538..563
e-value: 4600.0
score: 2.5
coord: 736..757
e-value: 6200.0
score: 1.6
coord: 473..498
e-value: 6200.0
score: 1.6
coord: 317..351
e-value: 7300.0
score: 1.1
coord: 236..262
e-value: 2500.0
score: 4.4
coord: 420..441
e-value: 10000.0
score: 0.1
coord: 841..862
e-value: 1600.0
score: 5.8
coord: 811..836
e-value: 1600.0
score: 5.7
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 211..383
e-value: 1.2E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 334..589
coord: 750..936
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 334..589
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 750..936
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 340..495
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 724..909
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 480..669
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 106..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig73contigP-fluviatile_contig73:522910..540984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig73.13947.1mRNA_P-fluviatile_contig73.13947.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig73 519706..552793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig73.13947.1 ID=prot_P-fluviatile_contig73.13947.1|Name=mRNA_P-fluviatile_contig73.13947.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1179bp
MGASTPQQQQQQQQRQKWHSYSYPQQERQWPRPRQLQQQRRQQQDASATI
PPCPIPLASGGVYTVSLPRDAADLATDLASCTGGAYNVTWTGAVELTGPL
VVAADSTLTITGARGSGGGSEGPQTAAVLDGGGLTGLVDLGAGSSLRLED
VTLRNGRRESGNGGAVRAEGAGCSVVAFSSRFEDNAAALSSNWGGGGGMG
GALSLGSGVTAELENCVLSGNHAEDSGGAVWSQGGGGYLRLTGCVLENNT
AGWWGGAVGLQGRSTVVLDGSTFSKNFAVEEGGGVYGVNATVEVSGKSEF
VDNTVGQAGAGISLHEGSDLNISETIFRRNWLVLTNTSNAHGSGGGVRVI
GGSSRMARVSIADTLFDDNFATHGAGLWISSGYVLSAVRTIFRDNEANSL
MVAAAFGGGASLGSDGVAELSACNFTGNYAFNGGGGLMAEDCSVFISDSL
FEGNNNRFEGGALVAEENAIVTLQRSAFVDNYISGGGVGSGGAIVVSRAT
LRATDSVFDSNRAIQEDSEYDINADPLEGGGAVKLADMANATFSGCNFTL
NHAAVGGAVLVDGASTATLTGAVVTSNQAVAYGGGLSFHERSFCFMNDSF
MGENTAAAGGGGLHLSGATGALDGVTFDGNSVSAGSGGAVHVSSASNMTV
TGGGFASNSASRSGGHVLATNAGTNVELISSSSSSSSSPAPAPAERGLQA
GELPTSPLPSPLVLAYGHAGVHGGAVHASDGAAVTAFSVELSRNRAERNG
GAVSALGARLVRLDDCNTTANICGGGGGGASVEDGAFVGAGSNFTLNSAV
ADGGGLRVFSGARVELEDCQFNGNSAQVGGGVSSVDATLLATRCQVTGNS
ASSDGGGLRVAYQTSAVLDSCDISFNAASFDGGGVAVDASSGTTGDNLNA
SNASSTLTCRGRHLRGQSGGRARGRRVCNPGVDGDLRRVQLAAELRLSRG
CGLRVALDRFARGRLGVGIRPGANGRCGVCPQDQTGGKRRQLLSGGLGLD
ARGANDTWELDEGVSVLVPGVGRIGRSTRGWGARDGHVRLHGEIRKQMGG
KMPRGEDNAAARVHFGSARGLGHTRHHRVGAHHHRRTRGGPRGVDSGGGG
LFEPAGATTRCMDDRPGRGHTGGGGHRHCRHLGQTQLRHRRQNELQVQGP
ESSVRGVCAVYGEHNVLLLRKGRVLRRE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence