prot_P-fluviatile_contig72.13895.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig72.13895.1
Unique Nameprot_P-fluviatile_contig72.13895.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length217
Homology
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: A0A6H5LGD3_9PHAE (TAFII28 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGD3_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 6.770e-76
Identity = 144/233 (61.80%), Postives = 171/233 (73.39%), Query Frame = 0
Query:    1 MDGDGDILGMRRRPEPIPQAAGADDPSPSTAAAAS----------------RHVTGAGPLKRQRSNAGVSLTKADSERDVVAS-SGEVPVDQLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLRLPAPRERGLGDCGGGVRGSGKSLLGGGGVLTKGHAI 216
            MDGDGDILGMRRRPEP   A       P+TA+A +                    GA PLKR+RS A  + T+A+ +  VV S +GEVPVDQLNPEQL+RY+AW RSRFER  +RELILD+AAPTL RS+ESGQ RGV+ ET+TIAVA+MAKQFVGD+VEEAKRAQLERG++GPL+PSD+L+AR TLAR+GRGPPLR P  R+RGL    G   G G SLLGG GVLT+G+ I
Sbjct:    1 MDGDGDILGMRRRPEPAQPA------EPTTASAGNPXXXXXXXXXXXXXXXXXXAGASPLKRKRSLAAGAATRAEFQ--VVESVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIESGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLKARETLARDGRGPPLRSPTTRDRGLAGVQG-RNGGGGSLLGGPGVLTRGNPI 224          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: D7FZG3_ECTSI (TAFII28 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG3_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 4.300e-44
Identity = 92/154 (59.74%), Postives = 106/154 (68.83%), Query Frame = 0
Query:    1 MDGDGDILGMRRRPEPIPQAAGADDPSPSTAAAAS----------RHVTGAGPLKRQRSNAGVSLTKADSERDVVASSGEVPVDQLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEE 144
            MDGDGDILGMRRRPEP P A                         RH  GA PLKRQRS A  +  +A+ +  V   +GEVPVDQLNPEQL+RY+AW RSRFER  +RELILD+AAPTL RS+E GQ RGV+ ET+TIAVA+MAKQFVGD+VEE
Sbjct:    1 MDGDGDILGMRRRPEPAPPAEXXXXXXXXXXXXXXXXXXXXXXXXRHAAGASPLKRQRSLAAGAAARAEGQV-VEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEE 153          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: A0A1D1YYR5_9ARAE (Transcription initiation factor TFIID subunit 11 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YYR5_9ARAE)

HSP 1 Score: 63.9 bits (154), Expect = 7.000e-9
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   75 QLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLRLP 182
            Q   EQ  RY+++RRS F+R  +R L+ +           +G  +  LP   TI V A+AK FVGD+VE  +   +ER ESGPLRP  + EA   L  EG+ P   +P
Sbjct:  118 QFTKEQTDRYESYRRSNFQRSNMRRLLTN----------ITGSQKVSLP--ITIVVCAIAKMFVGDLVEMGRIVMVERKESGPLRPCHIREAFRRLKLEGKVPKRSVP 213          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: UPI0009E2F8B7 (LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 11-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2F8B7)

HSP 1 Score: 63.2 bits (152), Expect = 1.330e-8
Identity = 56/160 (35.00%), Postives = 81/160 (50.62%), Query Frame = 0
Query:   28 PSTAAAASRHVTGAGPLKRQRS---NAGVSLTKADS--ERDVVASSGEVPVDQLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLRLP 182
            PSTAA AS  + G G          N  V L K  S  + D +A    + + Q +PEQ+ RY+++RRS F++  +R L+          +   G  +  +P T  I  + +AK FVG++VE  +    ER ESGPLRP  + EA   L REG+ P   +P
Sbjct:   67 PSTAANASNAIGGKGXXXXXXXXXXNMDVELRKFPSTGDPDKIAKMQAI-LAQFSPEQMSRYESFRRSGFQKSNMRRLL----------AAIVGSQKISVPMT--IVGSGIAKMFVGELVETGRIVMRERKESGPLRPCHIREAYRRLRREGKVPRKSVP 213          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: A0A6T7UYC1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A6T7UYC1_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 9.150e-8
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 0
Query:   76 LNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLRLP 182
            L P+Q+ RY+ +RRS  +R +V+ L+            +S    G +    TI +A + K FVGD+VE  K    ER E+GPLRP  V EA   ++ EG+ P    P
Sbjct:   95 LTPDQMDRYECFRRSALQRASVKRLM------------QSVMQSGTVSLPMTIVMAGITKLFVGDLVEGGKAVMEERKETGPLRPVHVREAFRRISAEGKIPTKNKP 189          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: UPI001745F140 (transcription initiation factor TFIID subunit 11-like n=4 Tax=Molossus molossus TaxID=27622 RepID=UPI001745F140)

HSP 1 Score: 61.2 bits (147), Expect = 9.520e-8
Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   76 LNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGP 177
            L+ EQL RY+ +RRS F R AV  L+   A+ ++             P+TA IA+A +AK FVG+VVEEA     + GE+ PL+P  + EA   L+ +G+ P
Sbjct:  154 LSEEQLNRYEVYRRSAFPRAAVNRLMRSAASTSV-------------PQTAVIAMAGLAKVFVGEVVEEALDVCEKWGEAPPLQPKHLREAVRRLSSKGKIP 242          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: UPI00174F05B6 (transcription initiation factor TFIID subunit 11-like n=2 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI00174F05B6)

HSP 1 Score: 60.8 bits (146), Expect = 1.010e-7
Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 0
Query:   21 AGADDPSPSTAAAASRHVTGAGPLKRQRSNAGVSLTKADSERDVVASSGEVPVDQLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLR 180
            AGA    PS+A AA +        K+ +     S+ + D E +  A    + +   + EQL RY+ +RRS F R AV+ ++            +S      + + A IA+A MAK FVG+VVEEA       GE  PL+P  + EA   L+ +G+ P +R
Sbjct:   74 AGASTERPSSAPAALKPRRKGRAAKQHKDTGEESVPEGDPEEE--AQKMRLLLSNFSEEQLTRYEVYRRSAFPRTAVKRVV------------QSAAGGAPVEQNALIAMAGMAKVFVGEVVEEALDVCESWGEKPPLQPKHLREAVRRLSAKGKVPRVR 219          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: A0A7S2FUI1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FUI1_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 1.460e-7
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   78 PEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLRLPAPRERGLGDCG 193
            PEQ+ R++ W+RS+F R A++ L+              G+  G   E   I +A +AK FVGD+VE A+      GE+GP++PS + +A     R G  P       R     DCG
Sbjct:   61 PEQIERFEHWKRSKFPRAAMKRLM--------------GEVLGSSTEKGAIVLAGVAKVFVGDLVEAARERMAAMGETGPIQPSHLRQAFRQAQRSGSVPASPRHTSRLFWQSDCG 162          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: A0A6P8I4J9_ACTTE (transcription initiation factor TFIID subunit 11-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I4J9_ACTTE)

HSP 1 Score: 59.7 bits (143), Expect = 2.330e-7
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 0
Query:   60 SERDVVASSGEVPVDQLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREGRGPPLR 180
            +E+D      ++ V   + EQL RY+ +RR+ F + A++ L+         +S+  G S   +P    IA+A +AK FVG+VVEEA   + + G  GPL+P  + EA   + ++G  P +R
Sbjct:  100 NEKDGGVEKMQLLVSSFSEEQLNRYEMYRRAAFPKAAIKRLM---------QSVTGGSS---IPPNVVIAMAGIAKVFVGEVVEEACDTKEQWGNKGPLQPKHLREAVRRMKKKGLVPSIR 208          
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Match: UPI000719E234 (transcription initiation factor TFIID subunit 11-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E234)

HSP 1 Score: 60.1 bits (144), Expect = 2.380e-7
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 0
Query:   70 EVPVDQLNPEQLRRYQAWRRSRFERGAVRELILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQLERGESGPLRPSDVLEARHTLAREG 174
            +V V     EQL RY+ +RR+ F R AVR ++         +SL  G     + +   IA+A +AK FVG+VVEEA     + GESGPL+P  + EA   L ++G
Sbjct:  143 QVLVSSFTGEQLNRYEMYRRAAFPRAAVRRIM---------QSLTGG----TIGQNVVIAMAGIAKVFVGEVVEEALDVTEQWGESGPLQPKHIREATRRLRQKG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LGD3_9PHAE6.770e-7661.80TAFII28 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FZG3_ECTSI4.300e-4459.74TAFII28 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1D1YYR5_9ARAE7.000e-939.81Transcription initiation factor TFIID subunit 11 (... [more]
UPI0009E2F8B71.330e-835.00LOW QUALITY PROTEIN: transcription initiation fact... [more]
A0A6T7UYC1_9CHLO9.150e-836.45Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
UPI001745F1409.520e-840.20transcription initiation factor TFIID subunit 11-l... [more]
UPI00174F05B61.010e-732.50transcription initiation factor TFIID subunit 11-l... [more]
A0A7S2FUI1_9EUKA1.460e-733.62Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A6P8I4J9_ACTTE2.330e-733.06transcription initiation factor TFIID subunit 11-l... [more]
UPI000719E2342.380e-739.05transcription initiation factor TFIID subunit 11-l... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 76..177
e-value: 1.1E-17
score: 65.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 77..175
IPR006809TAFII28-like proteinPFAMPF04719TAFII28coord: 73..167
e-value: 2.2E-19
score: 69.4
NoneNo IPR availablePANTHERPTHR13218FAMILY NOT NAMEDcoord: 31..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:587580..592251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13895.1mRNA_P-fluviatile_contig72.13895.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig72 586226..592327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig72.13895.1 ID=prot_P-fluviatile_contig72.13895.1|Name=mRNA_P-fluviatile_contig72.13895.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=217bp
MDGDGDILGMRRRPEPIPQAAGADDPSPSTAAAASRHVTGAGPLKRQRSN
AGVSLTKADSERDVVASSGEVPVDQLNPEQLRRYQAWRRSRFERGAVREL
ILDRAAPTLTRSLESGQSRGVLPETATIAVAAMAKQFVGDVVEEAKRAQL
ERGESGPLRPSDVLEARHTLAREGRGPPLRLPAPRERGLGDCGGGVRGSG
KSLLGGGGVLTKGHAI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR006809TAFII28