prot_P-fluviatile_contig71.13827.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig71.13827.1
Unique Nameprot_P-fluviatile_contig71.13827.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length120
Homology
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BLAST of mRNA_P-fluviatile_contig71.13827.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 4.930e-35
Identity = 70/120 (58.33%), Postives = 85/120 (70.83%), Query Frame = 0 
Query:    1 NPPATIQLAAGNAVIIVHVLHGQRQSRDKLPQFLVGLFEDGGLAKTGVGMKGDCTRLQRFFSEDVGNLVDHPSLASQRKVDWGPRRGLADLCLQLLGKSLEEQQHLRLSRWNITALTGEQ 120
            NPPATIQLAAG  V+I HVLHGQR    +LP  LV L ED  L KTGVG+KGDCTRL  F+  +V + VD  SLA +RKV+ G RRGLADLC+ LLG+ L +   +RLS+WN   L+ +Q
Sbjct:  270 NPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQ 389
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BLAST of mRNA_P-fluviatile_contig71.13827.1 vs. uniprot
Match: A0A0D2WNE3_CAPO3 (3'-5' exonuclease domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WNE3_CAPO3)

HSP 1 Score: 58.2 bits (139), Expect = 1.900e-7
Identity = 42/119 (35.29%), Postives = 55/119 (46.22%), Query Frame = 0 
Query:    2 PPATIQLAAGNA-VIIVHVLHGQRQSRDKLPQFLVGLFEDGGLAKTGVGMKGDCTRLQRFFSEDVGNLVDHPSLASQRKVDWGPRRGLADLCLQLLGKSLEEQQHLRLSRWNITALTGE 119
            P A +QLA  N    + H++  Q      +P  L  L  D  +AK GVG+K D TRL R +S  V   VD   LA+ R V    R  L  L  + L   L++   LRL  W    L+ E
Sbjct:  227 PTALLQLAVENGPCYLFHLIQMQG-----IPPALQELLADSRIAKVGVGIKNDVTRLVRDYSLKVNGAVDLEELAAVRVVPLRTRWSLQALVQKTLNCLLDKSSELRLGNWEEAPLSWE 340
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BLAST of mRNA_P-fluviatile_contig71.13827.1 vs. uniprot
Match: A0A2P5IA84_9PEZI (3'-5' exonuclease n=1 Tax=Diaporthe helianthi TaxID=158607 RepID=A0A2P5IA84_9PEZI)

HSP 1 Score: 54.3 bits (129), Expect = 4.560e-6
Identity = 35/104 (33.65%), Postives = 53/104 (50.96%), Query Frame = 0 
Query:    6 IQLAAGNAVIIVHVLHGQRQSRDKL-PQFLVGLFEDGGLAKTGVGMKGDCTRLQRFFSEDVGNLVDHPSLASQRKVDWGPRRGLADLCLQLLGKSLEEQQHLRL 108
            +QLA+ + V ++HV       +D+L P  L  + ED  + KTGV +KGDCTRLQ++   +   + +   L  Q K     R  L +  L  L   ++E  HL L
Sbjct:  224 VQLASQSRVALIHV--AAFPIKDELVPPTLKSIMEDPEITKTGVWIKGDCTRLQKYLGIESRGIFELSHLFRQVKYTKNGRHDLINKRLVRLADQVQETMHLPL 325
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BLAST of mRNA_P-fluviatile_contig71.13827.1 vs. uniprot
Match: A0A3D8QF23_9EURO (3'-5' exonuclease domain-containing protein n=1 Tax=Aspergillus mulundensis TaxID=1810919 RepID=A0A3D8QF23_9EURO)

HSP 1 Score: 51.2 bits (121), Expect = 5.290e-5
Identity = 36/123 (29.27%), Postives = 60/123 (48.78%), Query Frame = 0 
Query:    4 ATIQLAAGNAVIIVHVLHGQRQ-SRDKL-PQFLVGLFEDGGLAKTGVGMKGDCTRLQRFFSEDVGNLVD-------------HPSLASQRKVDWGPRRGLADLCLQLLGKSLEEQQHLRLSRW 111
            +TIQLA+ N + + H+   +   S D L P  L  + E+  + KTGV +KGDCTRL+++   +     +             +P L ++ +V       LAD  ++ LG  L ++  +R S W
Sbjct:  116 STIQLASRNKIALFHIARFRPNLSLDHLVPPTLKTILENSDITKTGVNIKGDCTRLRKYLQINARGTFELSHLYKLIKYCRTNPQLINKYRVS------LADQVVEHLGLPLAKELDVRCSNW 232
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig71.13827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE4.930e-3558.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A0D2WNE3_CAPO31.900e-735.293'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A2P5IA84_9PEZI4.560e-633.653'-5' exonuclease n=1 Tax=Diaporthe helianthi TaxI... [more]
A0A3D8QF23_9EURO5.290e-529.273'-5' exonuclease domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..120
e-value: 1.2E-21
score: 78.8
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 6..117
e-value: 2.1E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 3..120
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig71contigP-fluviatile_contig71:608062..608421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig71.13827.1mRNA_P-fluviatile_contig71.13827.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig71 608062..608421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig71.13827.1 ID=prot_P-fluviatile_contig71.13827.1|Name=mRNA_P-fluviatile_contig71.13827.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp
NPPATIQLAAGNAVIIVHVLHGQRQSRDKLPQFLVGLFEDGGLAKTGVGM
KGDCTRLQRFFSEDVGNLVDHPSLASQRKVDWGPRRGLADLCLQLLGKSL
EEQQHLRLSRWNITALTGEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf