prot_P-fluviatile_contig71.13808.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig71.13808.1
Unique Nameprot_P-fluviatile_contig71.13808.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length919
Homology
BLAST of mRNA_P-fluviatile_contig71.13808.1 vs. uniprot
Match: A0A6H5KAJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ9_9PHAE)

HSP 1 Score: 754 bits (1948), Expect = 2.330e-256
Identity = 457/845 (54.08%), Postives = 540/845 (63.91%), Query Frame = 0
Query:   32 ATAQKIGFDRTPGQVEVGTCEGLKKYAELGIDVSIVVTENLLCPQGISISPGADVSIGSAFGDSYLIAIAEDFLAPKTSSASLFVNPRGSYLSLYELTIVNEAGLSGSPGQVRAVWNEGTLDVDGCIFNGLNFAALQDGGAIYSTAEPGNAGGAFVSARNSTFVGNVAANYGGAIASWGQGEIELXXXXXXXXEAVGAGDFRRAGSGGAVYASPGVFVTVHNSSFEGCLGRYGGAALFACGADISESTFNGNEATGLFGAVVNGDLSGEERVEATATLGXXXXXXXXXXNFTCPPLSVSGTLFDKNAATTGYGGAIASVDSSLTVYNSSLLDSLGGGIYFGTSNAGDARDRLELELIQFNSNDGSLSSPNFVGAALLVERTGSPASNTTGPIEDVPPSGSSSSSVAAVQSVGAAAG---------GGLSFVGAATEMYCFQNSPYDCEMYFGDGGDGDVGEVLVQLTGTIRCNACRGTSFTGIGSAVGAPIPSPVNAVDDDDGLSQMGQERAQGGTPSPTAVGTPPGARGGVG--------SEQEPKLLGATGGMRWVVVGLIVGIGGALLVCMCLLTVCRIRDKRERGRRGGDLRRPSALLGLGGGXXXXXXREGRPGSAAMVGPRSAS-SIADDDRQERGF---------------------------------------------------GSGGISTG------GGSPARDFLSVNLPKSSVVANVEVEQPQTGPGSGTRRRPSRRAAATATAADPSFRETIDSAVAVVDELTPHASELKARELARQRSIELKAAE----WASPPLVSAWGDDFPVGGTGHVALSRRSTPSKKGFTALEDE 797
            A  Q I  +RT G+VEVGTCEGLKK AELGID+SIVVT NL C   I++  G +VSIGSA  +++L+A+AEDFL P  +SASL VNP GSYL+L  LT  NEAG+ GSPG+VRAVWN G L VDGC+F  L+F++ QDGG IYSTAEPG+   AFVS RNSTF+GNVA N+GGAI+SWGQGE+E+        EAVGAG +RRAG+GGAVYASPGVFVTV NSSFEGCL RYGGAALFACGA+I ESTF+ NEATGLFGA+VNGDLS EER  AT +LG          N+TCPPL VSGT+F+ N+A+TGYGGAIASVDSSL+V+NSS+L SLGGGIYFGTS+    RD+LELEL+QFN N GS SSP+ VG+ALL+ERTG+PASNTTGP+E + PS SS+                        G + VG AT++YCFQN PYDCE YFGD      GE+ VQLTGT+RCN C+G++FTGIGSA GAP P+P+   DDDDGLSQMGQERAQGGTPSP  V                    E EP+LLG TG MRWVVVGLI  +G ALL+C+C+LTVCR R  + RG R          L +  GXXXXXX      ++AMVGPR  S S A DD  ERG                                                    G+  +S+       G   +R                       G G G R              DP  RET+DSAVAVV+  TP +SEL+ RELARQRS+EL AA     W SPPLVSAWG+   VGG GHVALS R+TP+K+GF AL ++
Sbjct:   31 AQGQVITVNRTAGEVEVGTCEGLKKNAELGIDISIVVTANLRCVDAITLPTGVEVSIGSAPDENFLVAVAEDFLVPDPTSASLLVNPEGSYLALDRLTFANEAGVLGSPGEVRAVWNAGQLQVDGCVFESLSFSSQQDGGGIYSTAEPGSGSSAFVSVRNSTFIGNVAENHGGAISSWGQGELEVSNCSFVGNEAVGAGSYRRAGAGGAVYASPGVFVTVLNSSFEGCLSRYGGAALFACGANIYESTFDSNEATGLFGAIVNGDLSDEERANATLSLGGGGQSG----NYTCPPLFVSGTMFESNSASTGYGGAIASVDSSLSVFNSSVLSSLGGGIYFGTSDD-SGRDQLELELLQFNWNGGSASSPDLVGSALLLERTGTPASNTTGPLEQLDPSTSSAXXXXXXXXXXXXXXXXXXXXXXTAGSTLVGVATDIYCFQNDPYDCEAYFGDSD----GEIAVQLTGTVRCNVCQGSAFTGIGSAAGAPTPAPI-VTDDDDGLSQMGQERAQGGTPSPAGVDGSXXXXXXXXXXXXXVPEEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRR--KGRGER---------ALEMADGXXXXXXXXXX--TSAMVGPRPLSTSAAADDTAERGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRTVAGAADLSSSSSRRPSGTESSRSVSRXXXXXXXXXXXXXXXXXXNGEGGGGR--------------DPR-RETVDSAVAVVNVETPLSSELRERELARQRSVELNAAREEEGWMSPPLVSAWGEGAVVGGKGHVALSARNTPTKRGFAALPED 837          
BLAST of mRNA_P-fluviatile_contig71.13808.1 vs. uniprot
Match: D7G311_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G311_ECTSI)

HSP 1 Score: 699 bits (1803), Expect = 1.310e-233
Identity = 436/817 (53.37%), Postives = 509/817 (62.30%), Query Frame = 0
Query:   37 IGFDRTPGQVEVGTCEGLKKYAELGIDVSIVVTENLLCPQGISISPGADVSIGSAFGDSYLIAIAEDFLAPKTSSASLFVNPRGSYLSLYELTIVNEAGLSGSPGQVRAVWNEGTLDVDGCIFNGLNFAALQDGGAIYSTAEPGNAGGAFVSARNSTFVGNVAANYGGAIASWGQGEIELXXXXXXXXEAVGAGDFRRAGSGGAVYASPGVFVTVHNSSFEGCLGRYGGAALFACGADISESTFNGNEATGLFGAVVNGDLSGEERVEATATLGXXXXXXXXXXNFTCPPLSVSGTLFDKNAATTGYGGAIASVDSSLTVYNSSLLDSLGGGIYFGTSNAGDARDRLELELIQFNSNDGSLSSPNFVGAALLVERTGSPASNTTGPIEDVPPSGSSSSSVAAVQSVGAAAG-----------GGLSFVGAATEMYCFQNSPYDCEMYFGDGGDGDVGEVLVQLTGTIRCNACRGTSFTGIGSAVGAPIPSPVNAVDDDDGLSQMGQERAQGGTPSPTAVGTPPGARGGVG--------SEQEPKLLGATGGMRWVVVGL----IVGIGGALLVCMCLLTVCRIR---------DKRERGRRGGD-------------------LRRPSALLGLGGGXXXXXXREG-RPGSAAMVGPRSASSIADDDRQERGFGSGGISTGGGSPARDFLSVNLPKSSVVANVEVEQPQTGPGSGTRRRPSRRAAATATAADPSFRETIDSAVAVVDELTPHASELKARELARQRSIELKAAE----WASPPLVSAWGDDFPVGGTGHVALSRRSTPSKKGFTALEDE 797
            I  +RT G+VEVGTCEGLKK AELGID+SIVVT NL C   I++  G +VSIGSA  +++L+A+AEDFL P  +SASL VNP GSYL+L  LT  NEAG+ GSPG+VRAVWN G LDVDGC+F  L+F++ QDGG IYS AEPG+   AFVS RNSTF+GNVA N+GGAI+SWGQGE+E+        EAVGAG +RRAG+GGAVYASPGVFVTV NSSFEGCLGRYGGAALFACGA+I ESTF+ NEATGLFGA+VNGDLS EER  AT +LG          N+TCPPL VSGT+F+ N+A+TGYGGAIASVDSSL+V+NSS+L +LGGGIYFGTS+    RD+LELEL+QFN N GS SSP+ VG+ALL+ERTG+PASNTTGP+E V PS SS                           G + VG A ++YCFQN PYDCE YFGD      GE+ VQLTGT+RCNAC+G++FTGIGSA GAP P+P+ A DDDDGLSQMGQERAQGGTPSP  V                    E EP LLG TG MR    G     + G                 R         D  ERG RG +                      P         XXXXXXR G R   A    P S+SS     R+  G GS            D        S           + G G   R                  RET+DSAVAVV+  TP +SEL+  ELARQRS+ELKAA     W SPPLVSAWG+   VGG GHVALS R+TP+K+GF  L D+
Sbjct:   57 ITVNRTAGEVEVGTCEGLKKNAELGIDISIVVTANLRCVDAITLPAGVEVSIGSAPDENFLVAVAEDFLVPDPTSASLLVNPEGSYLALDRLTFANEAGVLGSPGEVRAVWNAGQLDVDGCVFESLSFSSQQDGGGIYSMAEPGSGSSAFVSVRNSTFIGNVAENHGGAISSWGQGELEVSNCSFVGNEAVGAGSYRRAGAGGAVYASPGVFVTVLNSSFEGCLGRYGGAALFACGANIYESTFDSNEATGLFGAIVNGDLSDEERANATLSLGGGGQSG----NYTCPPLFVSGTMFESNSASTGYGGAIASVDSSLSVFNSSVLSTLGGGIYFGTSDD-SGRDQLELELLQFNWNGGSSSSPDLVGSALLLERTGTPASNTTGPLEQVDPSTSSXXXXXXXXXXXXXXXXXXXXXXXXXTAGSTLVGVARDIYCFQNDPYDCEAYFGDSD----GEIAVQLTGTVRCNACQGSAFTGIGSAAGAPTPAPIVA-DDDDGLSQMGQERAQGGTPSPAGVDGSXXXXXXXXXXXXXXPEEESEPDLLGTTGTMRRKGRGERALELAGXXXXXXXXXXXXXXVGPRXXXXXAAADDTAERGLRGTNNGXXXXXXXXXXXXXXXXWATSPGTSAAXXXXXXXXXXRSGSRRAVAGAADPSSSSS-----RRPSGTGSSRXXXXXXXXXXDL-------SXXXXXXXXXXXEDGGGRDPR------------------RETVDSAVAVVNVETPLSSELRELELARQRSVELKAAREEEGWMSPPLVSAWGEGAVVGGNGHVALSARNTPTKRGFAVLPDD 833          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig71.13808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAJ9_9PHAE2.330e-25654.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G311_ECTSI1.310e-23353.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 571..594
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..570
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 595..918
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..34
score: 0.636
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 571..593
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 107..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig71contigP-fluviatile_contig71:362350..368399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig71.13808.1mRNA_P-fluviatile_contig71.13808.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig71 362216..370768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig71.13808.1 ID=prot_P-fluviatile_contig71.13808.1|Name=mRNA_P-fluviatile_contig71.13808.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=919bp
MVSEQSRRRPFASYALPLFAACPLLLLLFSRATAQKIGFDRTPGQVEVGT
CEGLKKYAELGIDVSIVVTENLLCPQGISISPGADVSIGSAFGDSYLIAI
AEDFLAPKTSSASLFVNPRGSYLSLYELTIVNEAGLSGSPGQVRAVWNEG
TLDVDGCIFNGLNFAALQDGGAIYSTAEPGNAGGAFVSARNSTFVGNVAA
NYGGAIASWGQGEIELRNCSFVGNEAVGAGDFRRAGSGGAVYASPGVFVT
VHNSSFEGCLGRYGGAALFACGADISESTFNGNEATGLFGAVVNGDLSGE
ERVEATATLGGGGGGGGGGGNFTCPPLSVSGTLFDKNAATTGYGGAIASV
DSSLTVYNSSLLDSLGGGIYFGTSNAGDARDRLELELIQFNSNDGSLSSP
NFVGAALLVERTGSPASNTTGPIEDVPPSGSSSSSVAAVQSVGAAAGGGL
SFVGAATEMYCFQNSPYDCEMYFGDGGDGDVGEVLVQLTGTIRCNACRGT
SFTGIGSAVGAPIPSPVNAVDDDDGLSQMGQERAQGGTPSPTAVGTPPGA
RGGVGSEQEPKLLGATGGMRWVVVGLIVGIGGALLVCMCLLTVCRIRDKR
ERGRRGGDLRRPSALLGLGGGGGDGEGREGRPGSAAMVGPRSASSIADDD
RQERGFGSGGISTGGGSPARDFLSVNLPKSSVVANVEVEQPQTGPGSGTR
RRPSRRAAATATAADPSFRETIDSAVAVVDELTPHASELKARELARQRSI
ELKAAEWASPPLVSAWGDDFPVGGTGHVALSRRSTPSKKGFTALEDEQEK
LEVEEARRRGRSSRSRERRAAAAAGGARLAVSADAADRAASRVTTVRGSI
HGERRGRSRTSRRAPSSTAYDDVDSNTAATVGRGSSSSAERKISHRLLGT
KVPAAVAAVAAAGSGREE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence