prot_P-fluviatile_contig71.13792.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig71.13792.1
Unique Name	prot_P-fluviatile_contig71.13792.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	104

Homology

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5KQX7_9PHAE (HTH psq-type domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX7_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 5.210e-50
Identity = 90/103 (87.38%), Postives = 91/103 (88.35%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEEQVRKA      +DD MSVRKAA VFGVGRTSIEDRRRGKVAMNAKVG ETILSKEEEDS EDILLFAARNFL V RVHLRDAVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEQVRKACAA---IDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIP 100

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.380e-49
Identity = 90/103 (87.38%), Postives = 91/103 (88.35%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEEQVRKA      +DD MSVRKAA VFGVGRTSIEDRRRGKVAMNAKVG ETILSKEEEDS EDILLFAARNFL V RVHLRDAVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEQVRKACAA---IDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIP 100

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 6.830e-48
Identity = 89/103 (86.41%), Postives = 93/103 (90.29%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEE+VRKA      +D+ MSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILS+EEEDS EDILL AARNFL VDRVHLRDAVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEKVRKAFAA---IDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIP 100

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5K547_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K547_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.690e-47
Identity = 88/103 (85.44%), Postives = 92/103 (89.32%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTR KVDEE+VRKA      +D+ MSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILS+EEEDS EDILL AARNFL VDRVHLRDAVRRLCNDGRRIP
Sbjct:    1 MTRCKVDEEKVRKAFAA---IDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIP 100

[Close]

BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5JSC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC6_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.800e-47
Identity = 87/103 (84.47%), Postives = 89/103 (86.41%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEEQVRKA      +DD MS R AAEVFG+GRTSIEDRRRGKVAMNAKVGPETILS EEED  EDILLFAARNFL VDRVHLR AVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEQVRKACAA---IDDDMSDR-AAEVFGLGRTSIEDRRRGKVAMNAKVGPETILSNEEEDPLEDILLFAARNFLAVDRVHLRGAVRRLCNDGRRIP 99

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5JRN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN0_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 6.500e-47
Identity = 88/108 (81.48%), Postives = 89/108 (82.41%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAA-----EVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEEQVRKA      + D MSVRKAA       FGVG  SIEDRRRGKVAMNAKVGPETILSKEEEDS EDILLFAARNFL VDRVHLRDAVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEQVRKAYAA---IGDGMSVRKAAXGLLRSFFGVGHMSIEDRRRGKVAMNAKVGPETILSKEEEDSLEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIP 105

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.830e-46
Identity = 90/103 (87.38%), Postives = 91/103 (88.35%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEEQVRKA      +DD MSVRKAA VFGVGRTSIEDRRRGKVAMNAKVG ETILSKEEEDS EDILLFAARNFL V RVHLRDAVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEQVRKACAA---IDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIP 100

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 8.380e-46
Identity = 89/103 (86.41%), Postives = 91/103 (88.35%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MTRRKVDEEQVRKA      +DD MSVRKAAEVFGVGRTSI DRRRGK AMNAKVGPETILSKEEEDS E ILLFAARNFL VDRV+LRDAVRRLCNDGRRIP
Sbjct:    1 MTRRKVDEEQVRKACAA---IDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIP 100

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BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: D7G6G3_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G3_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.150e-41
Identity = 80/95 (84.21%), Postives = 81/95 (85.26%), Query Frame = 0

Query:    1 MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRL 95
            M RRKVDEEQVRKA      +DD MSVRKAAEVFGVGRTSI DRRRGKVAMN KVGPETILSKEEEDS E ILLFAARN L VDRVHLRDAVRRL
Sbjct:    1 MIRRKVDEEQVRKACAA---IDDGMSVRKAAEVFGVGRTSIADRRRGKVAMNTKVGPETILSKEEEDSLEHILLFAARNLLAVDRVHLRDAVRRL 92

[Close]

BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Match: A0A6H5K4M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M5_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.620e-38
Identity = 74/79 (93.67%), Postives = 74/79 (93.67%), Query Frame = 0

Query:   25 MSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGRRIP 103
            MSVRKAA VFGVGRTSIEDRRRGKVAMNAKVG ETILSKEEEDS EDILLFAARNFL V RVHLRDAVRRLCNDGRRIP
Sbjct:    1 MSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIP 79

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig71.13792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQX7_9PHAE	5.210e-50	87.38	HTH psq-type domain-containing protein (Fragment) ...	[more]
A0A6H5JRY4_9PHAE	3.380e-49	87.38	HTH psq-type domain-containing protein n=4 Tax=Ect...	[more]
A0A6H5KJ62_9PHAE	6.830e-48	86.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K547_9PHAE	2.690e-47	85.44	HTH psq-type domain-containing protein n=1 Tax=Ect...	[more]
A0A6H5JSC6_9PHAE	3.800e-47	84.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRN0_9PHAE	6.500e-47	81.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFM5_9PHAE	4.830e-46	87.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRA3_9PHAE	8.380e-46	86.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G6G3_ECTSI	1.150e-41	84.21	Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5K4M5_9PHAE	1.620e-38	93.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007889	DNA binding HTH domain, Psq-type	PFAM	PF05225	HTH_psq	coord: 24..49 e-value: 7.5E-5 score: 22.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig71	contig	P-fluviatile_contig71:200481..200792 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig71.13792.1	mRNA_P-fluviatile_contig71.13792.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig71 199044..200885 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig71.13792.1 ID=prot_P-fluviatile_contig71.13792.1|Name=mRNA_P-fluviatile_contig71.13792.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=104bp
MTRRKVDEEQVRKALCKRYQVDDSMSVRKAAEVFGVGRTSIEDRRRGKVA
MNAKVGPETILSKEEEDSPEDILLFAARNFLVVDRVHLRDAVRRLCNDGR
RIP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007889	HTH_Psq