prot_P-fluviatile_contig70.13765.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig70.13765.1
Unique Name	prot_P-fluviatile_contig70.13765.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	209

Homology

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BLAST of mRNA_P-fluviatile_contig70.13765.1 vs. uniprot
Match: D7FNB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB4_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 5.760e-55
Identity = 100/185 (54.05%), Postives = 128/185 (69.19%), Query Frame = 0

Query:   26 PRGSVQKISFSNHKLYHDALWYTNIYVYLALLYGALLIGSAIHVTGVPTPVHFLLGLEDLQELGEQHSGKVSAAAEGS-TRSGALSLGTAGTMGLLVGLMVRRCCRWDRSKGSVAVDWHNLFKYTYMGRSILAAMTAVLTWRGLNSLKESKESESGYGVVSLVLVAAAALSMLGGGTAHFLHFRV 209
            P  +  K+S SNHKLYH+AL +T IYVYL + Y  LL+ +A+H++GVP  V  +LGL+   +       K  A  EG   RSGALSL TAG MGLLVG+MVR CCR+D+S G V  +WH+L KYT+MGR+I AAM AVLTWRGL SLK+ +  E G G+V  VL+AAA LS+    + +FLHFR+
Sbjct:    2 PAATAHKVSASNHKLYHEALRFTTIYVYLDVAYATLLLAAALHLSGVP--VGLILGLDVPLK-------KSEAGGEGGLVRSGALSLATAGVMGLLVGVMVRGCCRFDKSHGCVVTNWHDLLKYTHMGRTITAAMCAVLTWRGLGSLKDFQIPEGGVGLVPAVLIAAAVLSLAAAASMNFLHFRM 177

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig70.13765.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig70.13765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FNB4_ECTSI	5.760e-55	54.05	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 108..129
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 70..107
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 130..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 180..205
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 50..69
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 169..179
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 206..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 150..168
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..49
None	No IPR available	TMHMM	TMhelix		coord: 183..205
None	No IPR available	TMHMM	TMhelix		coord: 50..72
None	No IPR available	TMHMM	TMhelix		coord: 146..168
None	No IPR available	TMHMM	TMhelix		coord: 106..125

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig70	contig	P-fluviatile_contig70:425366..428254 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig70.13765.1	mRNA_P-fluviatile_contig70.13765.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig70 425366..428254 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig70.13765.1 ID=prot_P-fluviatile_contig70.13765.1|Name=mRNA_P-fluviatile_contig70.13765.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=209bp
PARPTLPALRSEHSLPLYPVFPIMPPRGSVQKISFSNHKLYHDALWYTNI
YVYLALLYGALLIGSAIHVTGVPTPVHFLLGLEDLQELGEQHSGKVSAAA
EGSTRSGALSLGTAGTMGLLVGLMVRRCCRWDRSKGSVAVDWHNLFKYTY
MGRSILAAMTAVLTWRGLNSLKESKESESGYGVVSLVLVAAAALSMLGGG
TAHFLHFRV