prot_P-fluviatile_contig7.13662.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13662.1
Unique Nameprot_P-fluviatile_contig7.13662.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length619
Homology
BLAST of mRNA_P-fluviatile_contig7.13662.1 vs. uniprot
Match: D8LME0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME0_ECTSI)

HSP 1 Score: 712 bits (1839), Expect = 9.000e-251
Identity = 367/479 (76.62%), Postives = 403/479 (84.13%), Query Frame = 0
Query:    7 RCNSVRLPASAKAVLVAFVASLASNTILAQQVGNLTFPGQEYAVNISASSLNNPFDNTAFNPASSIGVSVDGTGVYVGGELGGLIFVARNTDDGTLKMNRAWATSDFDEALQSVEQIVVSPDGSKLITLGSRGLGAGTFGVFSISADGNLALLQEDDHRGILRADFPTTSSQDLYAIDDDQSVLTHYAYDGGRFVVSQTVGGFTCIYGLGVAPDGLNVYVTDDCLYKVTNFVRDTETGSVAFQDELIGDPHNGDGLGCLKSLSFTADGVWVVGLDSCDNVISILKRDLATGTLTPISTISTVNPNGNKINIDKSWSALVVSDGSGDIYVADWSDRNIMWVRADFGTGGDGSVIGTNWFSLDFKPSTLAVSPDLQTVYAANKENTVWTGGAYSRVAVPVPDVKSGGAVGPGVNVVLAVTLSLSLVAAIVVAGAAIKYVRRKRDNEDYADEEETLRAALEANPNDAVAHNNLGYLMETVYK 485
            R ++ R+  SA AVL   V  L +   LAQQVGNLT   + Y+VN++ SSLNNPFD+T+FNPAS+IGVS DGTGVYVGGELGGLI +AR+ +DG+L M RAWA SDFDEALQSVEQIVV+PDGSKLITLGSRGLG GTFGVFSISADG+L LLQEDDHRGI+RA FP +SS+DLYAIDDD+SVLTHY YDG RFVVSQTVGGFTC+YGLGVAPDG NVYV DDCLY VTNF RD +TGS+ FQDEL GDP NGDGLGCLKSLSFT DG WVVGLDSCD+VISILKRDL TGTLTP + I+T NP+GN INIDK+WSALVVSDG GDIYVADWSD  I+WVRADFG GGDGSVI TNWFSL FKPSTL  SPDLQTVY ANKEN VW GGAY RVAVP PD    G     VNV LAV LS+SLVAAIV+AG A K+++RKR+   YA EEETLRAALEANPNDAVAHNNLGYLMETVYK
Sbjct:    3 RKSNSRVTVSATAVLGVLVGLLTAEGALAQQVGNLTGLSRGYSVNLTGSSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTMTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQTVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGT--SAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYK 479          
BLAST of mRNA_P-fluviatile_contig7.13662.1 vs. uniprot
Match: A0A835ZFA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.420e-38
Identity = 146/487 (29.98%), Postives = 219/487 (44.97%), Query Frame = 0
Query:   30 SNTILAQQ--VGNLTFPGQEYAVNI-SASSLNNPFDNTAFNPASSIGVSVDGTGVYVGGELGGLIFVARNTDDGTLKMNRAWATSDFDEALQSVEQIVVSPDGSKLITLGSRGLGAGTFGVFSISADGNLALLQEDDHRGILRADFPTTSSQDLYAIDDDQSVLTHYAYDGGR--FVVSQTVGGFTCIYG-----LGVAPDGLNVYVTDDCLYKVTNFVRDTETGSVAFQ--DELIGDPH--NGDGLGCLKSLSFTADGVWVVGLDSCDNVISILKRDLATGTLTPISTISTVNPNGNKINIDKSWSALVVSDGSGDIYVADWSDRNIMWVRADFGTGGDGSVIGTNWFSLDFKPSTLAVSPDLQTVYAA-NKENTV---------WTGGAYSRV-AVP------VPDVKSGGAVGPGVNVVL----AVTLSLSLVAAIVVAGAAIKYVRRKRDNEDYADEEETLRAALEANPNDAVAHNNLGYLME 481
            S+ +LAQ   VG L+      A +  S S  +NPF +   + AS+I VS DG  VYVGG+ GGL ++ R+   G L+  + W  S F  AL++V+ + +S D   ++  G++    G+ G+FS+  DG  +LL +++   I  A F   S+ D Y ID     L  ++Y      F V Q +     + G     L ++PDGLNVYV D    K  NF RD  TG V       L GDP+    DG+G   S++F++   +   L++    +++L R +  G L  +S       +G  +        L+ SD   D+YV   S   I W++ D  T    ++    WF    +P  L      + VYA     NT          W G  ++R  AVP       P   S          +L    A T +L L+A               +  E    EEE    AL+A+PNDA+AHNN G+ ++
Sbjct:   15 SSGLLAQAAAVGELSEASTPVAFDFTSLSEASNPFFSKT-SAASAIAVSRDGRNVYVGGDKGGLAWLTRDVATGDLRYQQGWPASAFTTALKAVQHVSISEDDGYMVICGNKADPYGSLGIFSLDVDGTPSLLYQEEIPDIQHALFAPGSATDFYTIDQTNMELRLWSYSSADHGFSVQQAIA----LEGPSPDALAISPDGLNVYVHDSSSAKNFNFARDPATGLVGESPASTLQGDPNAVGSDGIGHWSSMAFSSSAPFAFALETLVGQVTVLSRAVGNGALAVLSKFPVAYDDGAAVACRADAPLLLASDDDVDLYVLGESRGQIGWLQFDAATH---ALHANGWFVTGSRPRQLIADAAYEHVYATFAATNTXXXXXXXXXKWKGAHFNREPAVPPTPAPTTPQPTSATTYSVESQTLLLGESADTFNLMLIAV-------------HKSVELAQAEEEKFILALQASPNDALAHNNYGHFLQ 480          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LME0_ECTSI9.000e-25176.62TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZFA9_9STRA6.420e-3829.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 575..609
e-value: 16.0
score: 13.3
coord: 505..539
e-value: 14.0
score: 13.6
coord: 540..574
e-value: 0.14
score: 21.2
coord: 470..504
e-value: 10.0
score: 15.0
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 470..502
e-value: 34.0
score: 9.1
coord: 505..537
e-value: 11.0
score: 13.3
coord: 540..572
e-value: 61.0
score: 6.9
coord: 575..607
e-value: 29.0
score: 9.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 518..619
e-value: 8.8E-24
score: 85.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 447..517
e-value: 6.2E-13
score: 50.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 449..612
NoneNo IPR availablePFAMPF13432TPR_16coord: 447..504
e-value: 0.0087
score: 16.7
coord: 518..573
e-value: 5.9E-7
score: 30.0
NoneNo IPR availablePANTHERPTHR44227FAMILY NOT NAMEDcoord: 426..589
coord: 517..607
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 441..619
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..440
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availableSUPERFAMILY750113-carboxy-cis,cis-mucoante lactonizing enzymecoord: 64..391
NoneNo IPR availableTMHMMTMhelixcoord: 417..439
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 63..215
e-value: 2.8E-6
score: 29.0
coord: 266..399
e-value: 5.1E-7
score: 31.4
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 436..619
score: 29.438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:3179376..3191571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13662.1mRNA_P-fluviatile_contig7.13662.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 3179376..3191571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13662.1 ID=prot_P-fluviatile_contig7.13662.1|Name=mRNA_P-fluviatile_contig7.13662.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=619bp
SAAAGLRCNSVRLPASAKAVLVAFVASLASNTILAQQVGNLTFPGQEYAV
NISASSLNNPFDNTAFNPASSIGVSVDGTGVYVGGELGGLIFVARNTDDG
TLKMNRAWATSDFDEALQSVEQIVVSPDGSKLITLGSRGLGAGTFGVFSI
SADGNLALLQEDDHRGILRADFPTTSSQDLYAIDDDQSVLTHYAYDGGRF
VVSQTVGGFTCIYGLGVAPDGLNVYVTDDCLYKVTNFVRDTETGSVAFQD
ELIGDPHNGDGLGCLKSLSFTADGVWVVGLDSCDNVISILKRDLATGTLT
PISTISTVNPNGNKINIDKSWSALVVSDGSGDIYVADWSDRNIMWVRADF
GTGGDGSVIGTNWFSLDFKPSTLAVSPDLQTVYAANKENTVWTGGAYSRV
AVPVPDVKSGGAVGPGVNVVLAVTLSLSLVAAIVVAGAAIKYVRRKRDNE
DYADEEETLRAALEANPNDAVAHNNLGYLMETVYKDFAEAEAHYNEALRI
NPRAAFAHNSLGHLLHHRQKNYESAEEHYRKAISLHWRSPDAHYNLGCLL
QHHKGDLAEAEKQYRDAIKCDPKHGMAQYNLGWVLEKVKGDLPGAQKCYT
AAIEADPGDKDAARRLAKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013026TPR-contain_dom