prot_P-fluviatile_contig7.13659.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13659.1
Unique Nameprot_P-fluviatile_contig7.13659.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length301
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig7.13659.1 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 3.120e-62
Identity = 129/238 (54.20%), Postives = 138/238 (57.98%), Query Frame = 0 
Query:   50 PQSSLDLSLRWEGFVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLMLGSFVAKLEGVTIVIRGDAGKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADGGSESGSQSGRARASRPRTGRRRPLPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKQQVQAQHKNPQHQYREELLIRG 287
            P+SSLDLSLRWEG VLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTL+LG                                                                                           P+ GR+RP+PRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFK+QVQA+HK+ Q  YRE   + G
Sbjct:  191 PESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLG-------------------------------------------------------------------------------------------PKAGRQRPMPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSLEVQPVSLQGASAWFKRQVQAEHKSLQ--YREGEKVTG 335
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME5_ECTSI3.120e-6254.20Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 52..122
e-value: 1.6E-9
score: 37.9
IPR026849Autophagy-related protein 2PANTHERPTHR13190FAMILY NOT NAMEDcoord: 54..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:3134788..3138909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13659.1mRNA_P-fluviatile_contig7.13659.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 3134788..3138909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13659.1 ID=prot_P-fluviatile_contig7.13659.1|Name=mRNA_P-fluviatile_contig7.13659.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=301bp
SSADVGRRGRSSGAAEAGGETTRTVARRGTGGAGGGAGVIGAAMAGGDEP
QSSLDLSLRWEGFVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWY
TLMLGSFVAKLEGVTIVIRGDAGKANANFNATAAATAAGDDDGTGTANGN
GNGNGNGGASSSPEGAGGEHHHPSQQQHADGGSESGSQSGRARASRPRTG
RRRPLPRWLKWVLRRLKVKLADVTLRYESVGMCPLQGAAPAAVEVTLGSL
EVQPVSLQGASAWFKQQVQAQHKNPQHQYREELLIRGLAVSVEPLVDSPP
S
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N
IPR026849ATG2