prot_P-fluviatile_contig7.13651.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13651.1
Unique Nameprot_P-fluviatile_contig7.13651.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length182
Homology
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 5.350e-90
Identity = 135/171 (78.95%), Postives = 149/171 (87.13%), Query Frame = 0
Query:    1 MPGRDGYASNAD--QKWNSQKSYSDGFHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDREGRDRMTAKIMVQNLEVLDSRAEYAQRSDRSDGNLWESERLEKADA 169
            MPG  GY+S++        Q+S+SDGF EG+PRLN VFLTGYLGQDPKPKYFDSG+VVLNLSLAVKREYHP+ERKALG++ G+EETDWFQLEMWNRDAEYAAKVCKKGGRVGVTG LSL +W+DREG DR T KI+VQNLEVLDSRAE A RSDRSD NLWESERLEK DA
Sbjct:   16 MPGGYGYSSSSGGASPGGYQRSFSDGFDEGVPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGGLSLQSWIDREGNDRTTVKILVQNLEVLDSRAEQAMRSDRSDSNLWESERLEKMDA 186          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.420e-52
Identity = 81/129 (62.79%), Postives = 103/129 (79.84%), Query Frame = 0
Query:   22 SDGFHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDREGRDRMTAKIMVQNLEVLDSRAEYAQR 150
            S GF E IP+LN V LTG LGQDP  +YFD GK V+ LSLAVKREYH +ERKA+G+ YG+EETDWFQLE+W+R+AEYA KV  KG RVG+ G+L ++ W D+EG +R TAK++V N+EVL+++AE A R
Sbjct:   77 SSGFAESIPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGIEGSLVIDCWEDQEGEERATAKVIVSNMEVLETKAEIAMR 205          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.690e-45
Identity = 74/136 (54.41%), Postives = 101/136 (74.26%), Query Frame = 0
Query:   22 SDGFHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDRE-GRDRMTAKIMVQNLEVLDSRAEYAQRSDRSDG 156
            S  F + IPRLN V L+G +G DP+P+YFD GKVVLNLSLAV+R+YHP+ERK   + YG+EETDWF LE+W RDAE+A+    KG R+G+TG+L +++W DR  G  R   KI+V++L++L++RAE   R  R+ G
Sbjct:   97 SSPFEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGSLMMDSWEDRNTGEPRTKHKILVKHLDILETRAEAEARRSRNRG 232          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV)

HSP 1 Score: 155 bits (391), Expect = 6.160e-44
Identity = 70/126 (55.56%), Postives = 97/126 (76.98%), Query Frame = 0
Query:   22 SDGFHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDRE-GRDRMTAKIMVQNLEVLDSRAE 146
            S  F + IPRLN V L+G +G DP+P+YFD GKVVLNLSLA KR+YHP+ERK   + YG+EETDW+ LEMW RDAE+ +K   KG R+G+TG+L++++WVD+  G  R   KI V++L++L+++AE
Sbjct:  100 SSEFEDHIPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGSLTMDSWVDKNTGEPRSKYKIQVKHLDLLETKAE 225          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.240e-43
Identity = 74/140 (52.86%), Postives = 101/140 (72.14%), Query Frame = 0
Query:    8 ASNADQKWNSQKSYSDGFHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDRE-GRDRMTAKIMVQNLEVLDSRAE 146
            A++ D+  + + + +  F E IPR+N+V L G +GQDP PKY D GKVVLNLSLAVKR+YHP+ER    +  G+EETDWF LE+W RDAEYA+K   KG R+ VTG L ++ W DR  G  R  AKI+V++L++L+++AE
Sbjct:   86 ANDDDETSDEEFAEASEFEEHIPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVTGTLQIDTWTDRNTGEPRKKAKIIVRHLDILETKAE 225          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: B8C9K7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9K7_THAPS)

HSP 1 Score: 149 bits (375), Expect = 5.170e-43
Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = 0
Query:   25 FHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDR-EGRDRMTAKIMVQNLEVLDSRAE 146
            F E +P+LN V L G +G  P PKYFD GKVVLNLS+AVKR+YHP+ERK   +  G+EETDWF LE W RDAEY     +KG R+G+TG+L ++ WVD+  G  R   KI+V+++++L+SRAE
Sbjct:    6 FDEHLPKLNVVTLVGRVGGTPDPKYFDDGKVVLNLSVAVKRKYHPLERKVRNIRSGEEETDWFPLEFWGRDAEYVTNYVEKGARIGITGSLVMDGWVDKMTGEQRRRPKIVVRHIDILESRAE 128          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.450e-42
Identity = 67/123 (54.47%), Postives = 96/123 (78.05%), Query Frame = 0
Query:   25 FHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDRE-GRDRMTAKIMVQNLEVLDSRAE 146
            F   IP+LN V L+G +G  P+P+YFD GKVVLN+ LAVKR+YHP+ERK   + YG EETDWF LE+W RDAE+AA+   KG R+G+TG+L++++W D++ G+ R   KI+V++L+VL+++AE
Sbjct:  109 FEPHIPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGSLAIDSWTDKQTGQYRRKPKIVVRHLDVLETKAE 231          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: K0SQT6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQT6_THAOC)

HSP 1 Score: 147 bits (372), Expect = 2.700e-41
Identity = 69/123 (56.10%), Postives = 91/123 (73.98%), Query Frame = 0
Query:   25 FHEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDR-EGRDRMTAKIMVQNLEVLDSRAE 146
            F E +P+LN+V L G +G +P+PKYFD GKVVLNLSLA KR+YHP+ERK   +  G+EETDWF LE+W RDAEY A    KG R+G+TG+L  ++W+D+  G  R   KI V+ ++VL+SRAE
Sbjct:   73 FDEHLPKLNSVTLVGRVGNEPEPKYFDDGKVVLNLSLACKRKYHPLERKVREIKSGEEETDWFALEIWGRDAEYVANYVDKGARMGITGSLVQDSWIDKVSGMKRRKPKIAVRQVDVLESRAE 195          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.460e-40
Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 0
Query:   25 FHEGIPRLNTVFLTGYLGQDP-KPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDRE-GRDRMTAKIMVQNLEVLDSRAE 146
            F + IP+ N V L+G +G    +PKYFD GKVVL+LSLAVKR+YHP+ER+A  +  GDEETDWF LE+W RDAEYAAK  +KG R+GVTG+L ++ W DR  G  R   KI+V+ L++L+++AE
Sbjct:   36 FADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAE 159          
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Match: A0A7S2UQ80_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ80_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.180e-39
Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 0
Query:   25 FHEGIPRLNTVFLTGYLGQDP-KPKYFDSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGALSLNAWVDRE-GRDRMTAKIMVQNLEVLDSRAE 146
            F + IP+ N V L+G +G    +PKYFD GKVVL+LSLAVKR+YHP+ER+A  +  GDEETDWF LE+W RDAEYAAK  +KG R+GVTG+L ++ W DR  G  R   KI+V+ L++L+++AE
Sbjct:  145 FADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAE 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF5_ECTSI5.350e-9078.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAA6_9STRA2.420e-5262.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9W4H7_9STRA3.690e-4554.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1YYF7_TRICV6.160e-4455.56Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2SIA7_9STRA4.240e-4352.86Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B8C9K7_THAPS5.170e-4355.28Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S1ZHN3_9STRA3.450e-4254.47Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
K0SQT6_THAOC2.700e-4156.10Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2USN2_9STRA2.460e-4056.45Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2UQ80_9STRA4.180e-3956.45Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011344Single-stranded DNA-binding proteinTIGRFAMTIGR00621TIGR00621coord: 32..176
e-value: 9.9E-28
score: 95.5
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 32..166
IPR011344Single-stranded DNA-binding proteinHAMAPMF_00984SSBcoord: 32..145
score: 22.903
NoneNo IPR availablePIRSFPIRSF002070SSBcoord: 30..181
e-value: 1.6E-23
score: 81.5
NoneNo IPR availableGENE3D2.40.50.140coord: 30..180
e-value: 6.2E-28
score: 99.7
NoneNo IPR availablePANTHERPTHR10302:SF10SINGLE-STRANDED DNA-BINDING PROTEINcoord: 32..166
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 32..140
e-value: 2.1E-23
score: 82.3
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 32..142
score: 25.218
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 32..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:3025762..3028798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13651.1mRNA_P-fluviatile_contig7.13651.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 3025762..3028808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13651.1 ID=prot_P-fluviatile_contig7.13651.1|Name=mRNA_P-fluviatile_contig7.13651.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=182bp
MPGRDGYASNADQKWNSQKSYSDGFHEGIPRLNTVFLTGYLGQDPKPKYF
DSGKVVLNLSLAVKREYHPIERKALGVMYGDEETDWFQLEMWNRDAEYAA
KVCKKGGRVGVTGALSLNAWVDREGRDRMTAKIMVQNLEVLDSRAEYAQR
SDRSDGNLWESERLEKADAEASRQQSGKAAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011344ssDNA-bd
IPR000424Primosome_PriB/ssb
IPR012340NA-bd_OB-fold