prot_P-fluviatile_contig7.13619.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13619.1
Unique Nameprot_P-fluviatile_contig7.13619.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length554
Homology
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BLAST of mRNA_P-fluviatile_contig7.13619.1 vs. uniprot
Match: A0A6H5K945_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K945_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.820e-57
Identity = 224/568 (39.44%), Postives = 276/568 (48.59%), Query Frame = 0 
Query:   10 RHMRNSVLLVFSAGTIP-CLAFVAPLYRSSPVS----TGGARTSISHDCCNRPPSRRGQHPLRQHPFPRRQQRC--SLQCTAEEGKDRA---------GEGXXXXXXXXXXGLGGGWQVKSGGEGKKARXXXXX-GVGSVPGQLPERTRDGQDWAEWAREWREDPQGKADRLTAQWEAEAKENAGGXXXXXXXXXXXXXX---GKAGPSRGVIGSGFGGAVRETKSVPKGLEVSETGASAGDVVDWSAGQQLAETDRKESMAADSQQDAKHLESLDPVEREKLAEKLRLVLRKKPEQKTKLKKA---PSVGGDGRGFAS---PSSAGAAGANGGQRSARGXXXXXXXXXXXXXXXGAVVADGVAGVSVFPPVPAPPVAEGGGSGD---GSDGGQQLPPGDVALGGESKGAGGDVRSSGLASSGAGL-ENVPVLADNDGSSGAQAPAGTVASTAV--AAAAAAQGGSSHVGRVYPSGVEARRQGREGEGGGIPLKRVMGFGRGVALADPGSSASTSSTNGEEPSCTTAVDAAAEASAELEQSPPKVVPKADGKHANALNFGKGVSMPTE 545
            R +   VL + SA T   CLAFV+P      +S       A  S S   C            R + FP R QR   SL  TA EG D           G+           GL G WQVKSG EGK+AR      G GSVPGQLPE+TRDGQDWAEWAREWREDP+GKADRL +QW+AEAK N GG                 GKAGPSRGV+GSGFGG VR+TKSVPKGL VSET                             QQDAK+LESLDP +REKLAE+LR  L KK             PS  G+ +GF++   P+    A A  G+   RG               GAV A+ VAGVSVFP       AEG        GSDG  ++        GESKGA G   S+G+ + G G  E + V A  +G  G +  A       V   A AA +GG S VG    +   A   G E  G G+PL++VMG G GVA+ +  ++    S  G   +  +  ++A ++S E             G+ + AL+FGKG+S+P+E
Sbjct:    9 RFVAPIVLSLLSACTKHRCLAFVSPRLAPGVLSPWYDVPSAVASPSSLLC------------RGNSFPTRHQRRQRSLLRTAAEGGDGGAGDNXXXXXGDANAKTGTGASMGLDGEWQVKSG-EGKRARRGAGSDGFGSVPGQLPEKTRDGQDWAEWAREWREDPEGKADRLVSQWDAEAKANEGGGLQDGRSKKRKAKKNKKGKAGPSRGVVGSGFGGPVRQTKSVPKGLVVSETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAKNLESLDPSDREKLAEQLRTALGKKKXXXXXXXXXXXXPSDRGESKGFSTTAIPTGGTDASAIKGRGDGRGVLASAAAAA------GAVAAEDVAGVSVFPSA-----AEGSNGAMEQLGSDGEYEV--------GESKGAEGKSVSAGVGAEGRGKDEPLLVEAGAEGDPGKKTVADGSGGVQVLPVAGAAVEGGDSPVGGQQLASPGA--DGIEKIGDGVPLEKVMGIGTGVAVVEAATNDGACSDAGGVSAVGSTGESARDSSDE-------------GELSRALSFGKGISLPSE 529
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K945_9PHAE1.820e-5739.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..553
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:2658006..2665230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13619.1mRNA_P-fluviatile_contig7.13619.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 2657526..2665875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13619.1 ID=prot_P-fluviatile_contig7.13619.1|Name=mRNA_P-fluviatile_contig7.13619.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=554bp
MLSAPCATGRHMRNSVLLVFSAGTIPCLAFVAPLYRSSPVSTGGARTSIS
HDCCNRPPSRRGQHPLRQHPFPRRQQRCSLQCTAEEGKDRAGEGGGGGGA
GSAIGLGGGWQVKSGGEGKKARAGGGNGVGSVPGQLPERTRDGQDWAEWA
REWREDPQGKADRLTAQWEAEAKENAGGGSESKRRKSKRKKKGKAGPSRG
VIGSGFGGAVRETKSVPKGLEVSETGASAGDVVDWSAGQQLAETDRKESM
AADSQQDAKHLESLDPVEREKLAEKLRLVLRKKPEQKTKLKKAPSVGGDG
RGFASPSSAGAAGANGGQRSARGGGDGRGVLASAAAAAGAVVADGVAGVS
VFPPVPAPPVAEGGGSGDGSDGGQQLPPGDVALGGESKGAGGDVRSSGLA
SSGAGLENVPVLADNDGSSGAQAPAGTVASTAVAAAAAAQGGSSHVGRVY
PSGVEARRQGREGEGGGIPLKRVMGFGRGVALADPGSSASTSSTNGEEPS
CTTAVDAAAEASAELEQSPPKVVPKADGKHANALNFGKGVSMPTEASGKD
LVG*
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