prot_P-fluviatile_contig7.13514.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13514.1
Unique Nameprot_P-fluviatile_contig7.13514.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length278
Homology
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.120e-81
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 0
Query:  133 NKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAKAAY 276
            ++KARRNYEILEKF AGIELVGSEVKSCR SKINMDEGFAQAK GQCFLH +HIAECGVSNRFYQHEPRRPRRLLLHKREIKKL+DKVAQKGMTVVPLKIFF+D NRLKVEI LA GKNVRDKREDIK R+AKRDIQRI+K AY
Sbjct:    3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNRLKVEIGLALGKNVRDKREDIKARDAKRDIQRISKNAY 146          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)

HSP 1 Score: 191 bits (484), Expect = 7.530e-56
Identity = 99/169 (58.58%), Postives = 127/169 (75.15%), Query Frame = 0
Query:  106 RTMMMAENGASPAKKRKGTSPYKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAKA 274
            R +++   GA+ A K     P+KVIA NK+A RNYEILE FEAGIEL+G+EVKS R  + ++DEG+A AK G+C LH VHIA    SN + QHE +RPRRLLLHKREIK+L+D   + G T VPL ++FN +N LK+ +ALA+GKN RDKR+DI++REAKRD+QR  KA
Sbjct:    2 RWLLLLALGAADASK---DGPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKNLLKISVALARGKNERDKRDDIQQREAKRDLQRAVKA 167          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)

HSP 1 Score: 172 bits (435), Expect = 7.660e-50
Identity = 85/149 (57.05%), Postives = 117/149 (78.52%), Query Frame = 0
Query:  125 SPYKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAK 273
            SP K +A N+ ARRNYEIL+ FEAGI L+G+EVKSCR +++ + +G+ + K+G+C+L NVHIA+ G +  F+QHE  RPRRLLLHKREI+KL+ +  Q+G+T+VPL+ +FN++NR+KVEI LA+GK   DKR  IKER+ KR+I R  K
Sbjct:   43 SPSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNRMKVEIGLAKGKKNEDKRATIKERDQKREISRQLK 191          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A7S2S2L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L9_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.630e-49
Identity = 83/149 (55.70%), Postives = 113/149 (75.84%), Query Frame = 0
Query:  127 YKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAKAA 275
            Y+V + NK+ARRNYE LE+ EAGI LVG+EVK+ R  +I+M +GFAQ K G+C+L NVHI     S  F+QHE RR R+LLLHK +I+K   +V  K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R  K A
Sbjct:    2 YRVFSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIKTA 150          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A7S4FCI8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCI8_CHRCT)

HSP 1 Score: 168 bits (426), Expect = 1.060e-48
Identity = 84/149 (56.38%), Postives = 116/149 (77.85%), Query Frame = 0
Query:  122 KGTSPYKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQR 270
            KGT   + +  N++AR+NYE+LE++EAGI LVG+EVKSCR  KIN+ +G+ Q K+G+C+L NVHIA    S  F+QH+  R RRLLL+KREI+KL   V QKG+T+VP+K +FN  NRLK++IALA+GKNV DKR+ IK+R+  R+++R
Sbjct:   28 KGTGVARDVTLNRQARQNYELLEEYEAGISLVGTEVKSCRAGKINLRDGYCQIKDGECWLRNVHIARHQFSGTFFQHDETRSRRLLLNKREIRKLDAAVQQKGLTIVPVKAYFNCDNRLKLQIALARGKNVADKRDTIKQRDTDREVKR 176          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A7S2S2R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2R4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.400e-48
Identity = 83/149 (55.70%), Postives = 114/149 (76.51%), Query Frame = 0
Query:  127 YKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAKAA 275
            Y+V++ NK+ARRNYE LE+ EAGI LVG+EVK+ R  +I+M +GFAQ K G+C+L NVHI     S  F+QHE RR R+LLLHK +I+K   +V  K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R  K A
Sbjct:   80 YRVVSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIKTA 228          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: K9FEP1_9CYAN (SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FEP1_9CYAN)

HSP 1 Score: 162 bits (410), Expect = 1.640e-46
Identity = 84/159 (52.83%), Postives = 120/159 (75.47%), Query Frame = 0
Query:  115 ASPAKKRKGTSPYKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAK 273
            A   KK + +  +KV+A+N++AR  YEIL+ +EAGIEL G+EVKS R  K+N+ +G+AQ KNG+ +L NVHI+   ++N+ Y HEPRRPRRLLLHK EI+KL  KV +KG+T+VPLK++   + R+KV IA+ +GK + DKRE +K+++ KRDI R+ K
Sbjct:    2 AKTNKKSQPSDGFKVMADNRQARFTYEILDSYEAGIELKGTEVKSIRAGKVNLRDGYAQVKNGEVWLLNVHISPHDMTNQAYNHEPRRPRRLLLHKAEIRKLIGKVEEKGLTLVPLKLYLK-KGRVKVNIAIGRGKKLHDKRESLKQKQEKRDIARMMK 159          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A6P0TKC4_9CYAN (SsrA-binding protein n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TKC4_9CYAN)

HSP 1 Score: 160 bits (406), Expect = 6.760e-46
Identity = 83/160 (51.88%), Postives = 121/160 (75.62%), Query Frame = 0
Query:  118 AKKRKGTSP----YKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAK 273
            AK + GT P     KV+++N++AR  YEILE +EAGIEL+G+EVKS RQ ++NM +GF   ++G+ +L+N+HI+ C  +N+ + HEPRR R+LLLHK+EI KL  +V QKG+T+VPLK++  +   +KV IALA+GK + DKRED+K ++AKRD++R  K
Sbjct:    2 AKSKTGTKPKPTGQKVLSDNRQARFLYEILETYEAGIELLGTEVKSIRQGRVNMRDGFTAIRDGEAWLNNIHISPCSNTNQVFNHEPRRSRKLLLHKQEINKLIGQVEQKGLTIVPLKMYLKN-GWVKVTIALARGKKLHDKREDLKRKDAKRDVERALK 160          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: A0A6M8B3Q8_9CYAN (SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B3Q8_9CYAN)

HSP 1 Score: 160 bits (404), Expect = 1.050e-45
Identity = 80/147 (54.42%), Postives = 116/147 (78.91%), Query Frame = 0
Query:  127 YKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAK 273
            YKV+A N++AR  YEILE FEAGIELVG+EVKS R  K N+ +GFA  +NG+ +LHNVHI+    +++++ H+PRR R+LL+H++EI+KL  KV Q+G+T+VPLK++   R  +KV +ALA+GK + DKRED+K+++AKR++QR  K
Sbjct:    8 YKVVAENRQARFEYEILETFEAGIELVGTEVKSVRAGKANLRDGFALIRNGEVWLHNVHISPHDTASQYFNHDPRRTRKLLMHRQEIRKLIGKVEQQGLTLVPLKMYLK-RGWVKVSLALARGKKLHDKREDLKQKQAKREMQRAMK 153          
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Match: UPI0016841931 (SsrA-binding protein SmpB n=2 Tax=Leptolyngbya TaxID=47251 RepID=UPI0016841931)

HSP 1 Score: 159 bits (403), Expect = 1.540e-45
Identity = 81/147 (55.10%), Postives = 113/147 (76.87%), Query Frame = 0
Query:  127 YKVIANNKKARRNYEILEKFEAGIELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGKNVRDKREDIKEREAKRDIQRIAK 273
            YKV+A+N++AR  YEILE FEAGIEL G+EVKS RQ K+N+ +GFA  +NG+ +LHNVHI+    +N+ Y H+PRR RRLLLH  EI++L  +V QKG+T+VPLK+    R  +K+ + LA+GK + DKRED+K ++AKR+I+R+ K
Sbjct:    8 YKVVADNREARFQYEILETFEAGIELRGTEVKSIRQGKVNLRDGFALVRNGEVWLHNVHISPHETTNQVYNHDPRRTRRLLLHAEEIRRLIGQVEQKGLTLVPLKMHLK-RGWIKLSLGLARGKKLHDKREDLKRKQAKREIERVIK 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKD0_ECTSI1.120e-8188.89SsrA-binding protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YRQ5_9STRA7.530e-5658.58Small protein B n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S3EVW1_9EUKA7.660e-5057.05Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2S2L9_9STRA3.630e-4955.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4FCI8_CHRCT1.060e-4856.38Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S2S2R4_9STRA1.400e-4855.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K9FEP1_9CYAN1.640e-4652.83SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxI... [more]
A0A6P0TKC4_9CYAN6.760e-4651.88SsrA-binding protein n=1 Tax=Cyanothece sp. SIO2G6... [more]
A0A6M8B3Q8_9CYAN1.050e-4554.42SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1... [more]
UPI00168419311.540e-4555.10SsrA-binding protein SmpB n=2 Tax=Leptolyngbya Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000037SsrA-binding proteinPFAMPF01668SmpBcoord: 130..273
e-value: 2.6E-55
score: 186.3
IPR000037SsrA-binding proteinTIGRFAMTIGR00086TIGR00086coord: 129..272
e-value: 2.6E-53
score: 177.9
IPR000037SsrA-binding proteinPANTHERPTHR30308TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEXcoord: 126..274
IPR000037SsrA-binding proteinHAMAPMF_00023SmpBcoord: 120..277
score: 56.444
IPR023620Small protein BGENE3D2.40.280.10coord: 123..252
e-value: 9.6E-46
score: 156.9
IPR023620Small protein BSUPERFAMILY74982Small protein B (SmpB)coord: 124..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePRODOMPD004488coord: 130..255
e-value: 2.0E-28
score: 314.0
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.583

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1112872..1127229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13514.1mRNA_P-fluviatile_contig7.13514.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 1112799..1127316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13514.1 ID=prot_P-fluviatile_contig7.13514.1|Name=mRNA_P-fluviatile_contig7.13514.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp
MVRKFPRQALLTAAVASLLASCARSYMSSNGIRPPAAGRLAQPQRHHRRP
LPTRLEAKQARGRAKKGRKDVGGGSGWAVGSAAETGGLRDGRGRAYGAGR
RRGQPRTMMMAENGASPAKKRKGTSPYKVIANNKKARRNYEILEKFEAGI
ELVGSEVKSCRQSKINMDEGFAQAKNGQCFLHNVHIAECGVSNRFYQHEP
RRPRRLLLHKREIKKLQDKVAQKGMTVVPLKIFFNDRNRLKVEIALAQGK
NVRDKREDIKEREAKRDIQRIAKAAYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000037SsrA-bd_prot
IPR023620SmpB