prot_P-fluviatile_contig68.13316.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig68.13316.1
Unique Nameprot_P-fluviatile_contig68.13316.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length163
Homology
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BLAST of mRNA_P-fluviatile_contig68.13316.1 vs. uniprot
Match: D7FL62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL62_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 9.430e-43
Identity = 79/108 (73.15%), Postives = 89/108 (82.41%), Query Frame = 0 
Query:    3 VVNAFVVPGPSKIISGRPTRSSTSQARQPYSGGRDLVIVMGRGDTRTPKGKRMRHTYGKCRPQKKKDVVYFEGEVVKKAAPVARRWENIEYDEAAMALAKPAAVASAA 110
            V NAFVVPGPS+++SGR TR+STSQ           VIVMGRGDTRT KGKRMRH+YGKCRPQK+K+VVYFEGE+VKKAAPVARRWENIEYDEA+M   KPA V +AA
Sbjct:   18 VSNAFVVPGPSQVVSGRSTRASTSQ-----------VIVMGRGDTRTTKGKRMRHSYGKCRPQKQKEVVYFEGEIVKKAAPVARRWENIEYDEASMP--KPAPVEAAA 112
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig68.13316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL62_ECTSI9.430e-4373.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..157
IPR03082630S ribosomal proteinTIGRFAMTIGR04560TIGR04560coord: 42..67
e-value: 1.6E-8
score: 32.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig68contigP-fluviatile_contig68:103214..105737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig68.13316.1mRNA_P-fluviatile_contig68.13316.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig68 103187..106981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig68.13316.1 ID=prot_P-fluviatile_contig68.13316.1|Name=mRNA_P-fluviatile_contig68.13316.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=163bp
MGVVNAFVVPGPSKIISGRPTRSSTSQARQPYSGGRDLVIVMGRGDTRTP
KGKRMRHTYGKCRPQKKKDVVYFEGEVVKKAAPVARRWENIEYDEAAMAL
AKPAAVASAAAEEVMEAGVDSAVDAVGSAFEEAEAEAEEVAEEVADIAAD
AEEVVEKAVAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030826Ribo_THX