prot_P-fluviatile_contig67.13265.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig67.13265.1
Unique Nameprot_P-fluviatile_contig67.13265.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length191
Homology
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: D7FQT4_ECTSI (U1 small nuclear ribonucleoprotein C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT4_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.810e-33
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEDFVKKQAANGGAGPS 58
            MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLE FV++QAANGGAGPS
Sbjct:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEKFVQQQAANGGAGPS 58          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A6U1MC29_9STRA (U1 small nuclear ribonucleoprotein C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MC29_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.750e-21
Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEDFVKKQAANGGAGPSLGGGIMPTGPMNMGPQAGTGPRGPMGSGSLGMGPMNNSLAMPA 101
            MPRYYCDYC TYLTHDSA GR+QHNRGWKH +NVK++Y+QF+++F  K+      GP +             P+ G  P  P+G G+LG G  N + A  A
Sbjct:    1 MPRYYCDYCDTYLTHDSAQGRKQHNRGWKHRENVKVYYEQFMQEFYAKRQKTVPMGPGM-------------PRPGGPPVPPVGLGTLGPGLGNTAAAAAA 88          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A225VX70_9STRA (U1 small nuclear ribonucleoprotein C n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VX70_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 6.020e-21
Identity = 51/90 (56.67%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLE-DFVKKQAANGGAGPSLGGGI--MPTGPMNMG----PQAGTGPRGPM 83
            MPRYYCDYC TYLTHDS PGR+QHNRGWKH +NVKL+Y+QFL    V         GP+  G +   P GPMN G    P  G  PRG M
Sbjct:    1 MPRYYCDYCDTYLTHDSVPGRKQHNRGWKHRENVKLYYEQFLAGQGVIMTPGEWLRGPTPAGSLPLRPNGPMNGGMPGYPPRGIPPRGMM 90          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A329S385_9STRA (Matrin-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S385_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.370e-20
Identity = 57/112 (50.89%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLE-DFVKKQAANGGAGPSLGGGIMP--TGPMN---MGPQAGTGP------RGPMGSGSLGMGPMNNSLAMP 100
            MPRYYCDYC TYLTHDS  GR+QHNRGWKH +NVKL+Y+QFL    V         GP+  G + P   GPMN    GP  G  P      RGP G G +G GP   S+  P
Sbjct:    1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFLAGQGVIMNPGEWLRGPAPAGSLPPRSNGPMNGGMPGPPRGPPPMGAMSMRGPPGPGGMG-GPPPRSIYGP 111          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: G4YJ70_PHYSP (Matrin-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YJ70_PHYSP)

HSP 1 Score: 88.2 bits (217), Expect = 7.810e-20
Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFL 42
            MPRYYCDYC TYLTHDS PGR+QHNRGWKH +NVKL+Y+QFL
Sbjct:    1 MPRYYCDYCDTYLTHDSVPGRKQHNRGWKHRENVKLYYEQFL 42          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A0P1AIX6_PLAHL (U1 small nuclear ribonucleoprotein C n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIX6_PLAHL)

HSP 1 Score: 88.2 bits (217), Expect = 5.330e-19
Identity = 52/101 (51.49%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLE---------DFVKKQAANGG-----AGPSLGG--GIMPTG--PMNMGPQAGTGPRGPM 83
            MPRYYCDYC TYLTHDS  GR+QHNRGWKH +NVKL+Y+QFL          ++++  A  G      +GP LGG  GI P G  P  M P  G   R PM
Sbjct:    1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFLAGQGVVMNPGEWLRGPAPMGSLPPRPSGPLLGGIPGIPPRGGPPRGMVPPPGINMRPPM 101          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: K3WTM9_GLOUD (U1 small nuclear ribonucleoprotein C n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTM9_GLOUD)

HSP 1 Score: 87.4 bits (215), Expect = 1.000e-18
Identity = 50/90 (55.56%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEDFVKKQAANGGAGPSLGGGIMPTGP-MNMGPQAGTGPRGPMGSGSLG 89
            MPRYYCDYC TYLTHDS  GR+QHNRGWKH +NVKL+Y+QFL            AG    GGIM  G  +   P AG+ P  PMG G  G
Sbjct:    1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFL------------AGQ---GGIMTPGEWLRAAPAAGSLPPRPMGGGMPG 75          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A2D4BJ14_PYTIN (Matrin-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ14_PYTIN)

HSP 1 Score: 85.9 bits (211), Expect = 1.680e-18
Identity = 48/89 (53.93%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLED----FVKKQAANGGAGPSLGGGIMPTGPMNMGPQAGTG---PRGP 82
            MPRYYCDYC TYLTHDS  GR+QHNRGWKH +NVKL+Y+QFL          Q   G   P    G +P  PM  G   G G   PRGP
Sbjct:    1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFLTGQGVAMTPGQWLRGPPAP----GALPPRPMPGGMXXGPGMFPPRGP 85          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A8K1FL98_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL98_PYTOL)

HSP 1 Score: 86.3 bits (212), Expect = 2.600e-18
Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLE-DFVKKQAANGGAGPSLGGGIMP 65
            MPRYYCDYC TYLTHDS  GR+QHNRGWKH +NVKL+Y+QFL    V         GP + GG+ P
Sbjct:    1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFLTGQGVMMAPGQWLRGPPMAGGMPP 66          
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Match: A0A080ZAD2_PHYPR (Matrin-type domain-containing protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080ZAD2_PHYPR)

HSP 1 Score: 85.5 bits (210), Expect = 2.650e-18
Identity = 43/73 (58.90%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLE-DFVKKQAANGGAGPSLGGGIMPTGPMNMG 72
            MPRYYCDYC TYLTHDS  GR+QHNRGWKH +NVKL+Y+QFL    V         GP+  G + P  PMN G
Sbjct:    1 MPRYYCDYCDTYLTHDSQAGRKQHNRGWKHRENVKLYYEQFLAGQGVIMNPGEWLRGPAPAGSLPPR-PMNGG 72          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig67.13265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT4_ECTSI1.810e-3394.83U1 small nuclear ribonucleoprotein C n=1 Tax=Ectoc... [more]
A0A6U1MC29_9STRA1.750e-2148.51U1 small nuclear ribonucleoprotein C n=1 Tax=Fibro... [more]
A0A225VX70_9STRA6.020e-2156.67U1 small nuclear ribonucleoprotein C n=1 Tax=Phyto... [more]
A0A329S385_9STRA3.370e-2050.89Matrin-type domain-containing protein n=1 Tax=Phyt... [more]
G4YJ70_PHYSP7.810e-2083.33Matrin-type domain-containing protein n=2 Tax=Phyt... [more]
A0A0P1AIX6_PLAHL5.330e-1951.49U1 small nuclear ribonucleoprotein C n=1 Tax=Plasm... [more]
K3WTM9_GLOUD1.000e-1855.56U1 small nuclear ribonucleoprotein C n=1 Tax=Globi... [more]
A0A2D4BJ14_PYTIN1.680e-1853.93Matrin-type domain-containing protein n=1 Tax=Pyth... [more]
A0A8K1FL98_PYTOL2.600e-1860.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A080ZAD2_PHYPR2.650e-1858.90Matrin-type domain-containing protein n=1 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 1..37
e-value: 4.6E-7
score: 39.5
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 1..36
e-value: 9.3E-17
score: 60.5
IPR017340U1 small nuclear ribonucleoprotein CPIRSFPIRSF037969U1-Ccoord: 1..189
e-value: 1.9E-26
score: 92.3
IPR017340U1 small nuclear ribonucleoprotein CPANTHERPTHR31148FAMILY NOT NAMEDcoord: 1..186
IPR017340U1 small nuclear ribonucleoprotein CHAMAPMF_03153U1_Ccoord: 1..179
score: 10.032
NoneNo IPR availableGENE3D3.30.160.60coord: 1..53
e-value: 1.4E-21
score: 78.3
NoneNo IPR availablePANTHERPTHR31148:SF1U1 SMALL NUCLEAR RIBONUCLEOPROTEIN Ccoord: 1..186
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 4..36
score: 11.187
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig67contigP-fluviatile_contig67:177649..180032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig67.13265.1mRNA_P-fluviatile_contig67.13265.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig67 177649..180032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig67.13265.1 ID=prot_P-fluviatile_contig67.13265.1|Name=mRNA_P-fluviatile_contig67.13265.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=191bp
MPRYYCDYCGTYLTHDSAPGRRQHNRGWKHTDNVKLHYKQFLEDFVKKQA
ANGGAGPSLGGGIMPTGPMNMGPQAGTGPRGPMGSGSLGMGPMNNSLAMP
AGMGGRGPMSGGPMMGAPPRPGGFMGGGPMGGGPMMGGSGPGGFLGPRPM
GPMMGGPSPGGYMGGGPPRGPMPPQGHPPNGNGPGPVPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013085U1-CZ_Znf_C2H2
IPR017340U1_snRNP-C
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf