prot_P-fluviatile_contig65.13129.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig65.13129.1
Unique Nameprot_P-fluviatile_contig65.13129.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length88
Homology
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: D7G8V9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V9_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 4.700e-48
Identity = 73/87 (83.91%), Postives = 81/87 (93.10%), Query Frame = 0
Query:    1 MFIGFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITGGMPAFEQISRGVYTGGLN 87
            MFIGFLEY+IS IV KPGYIPGDYVGANDLF+EEGPHSQW ++Q KELHNGRAAMMGI GLVTHN +TGGMPAFEQISRGVY+GG++
Sbjct:  126 MFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGPHSQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGIH 212          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: I2CPJ1_NANGC (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ1_NANGC)

HSP 1 Score: 70.1 bits (170), Expect = 8.680e-13
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    3 IGFLEYIISVIVQKPGYIPGDYVGANDLF--TEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITGGMPAFEQISRG 80
            I  +EY+ + I + PGY PGDY+G  +    ++EG    W ++QTKEL+NGR AM+ IAGL+  +LITG   A EQIS G
Sbjct:  124 INVIEYLQNKIKELPGYRPGDYLGTWEWVEQSDEG----WDNYQTKELNNGRLAMVAIAGLIAQDLITG-QAALEQISAG 198          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: A0A835YRG9_9STRA (Fucoxanthin chlorophyll a c protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.310e-10
Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    2 FIGFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITG 69
            F G +E++ + I ++PG+  GDY+G+ DL  +EG   QW SFQTKEL+NGR AM+   GL+    I G
Sbjct:  126 FCGVIEFVQAKIRERPGFQAGDYIGSGDLM-DEGD-DQWKSFQTKELNNGRLAMLASIGLIGQTAIFG 191          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: A0A7S2LPK3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPK3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.220e-8
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    4 GFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITG 69
            G +E++   I ++PGYIPGD +GA   +  +     W  +Q KE++NGR AM+ I G++T +L+ G
Sbjct:  122 GAIEWLAQDIKKRPGYIPGDLLGA--AYWVDDSDEGWVDYQNKEINNGRLAMVAIMGIITQDLLFG 185          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: A0A1Z5K7A5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7A5_FISSO)

HSP 1 Score: 58.9 bits (141), Expect = 1.270e-8
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    4 GFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITG 69
            G +E++   I ++PGY+PGD +GA+  F  +     W  +Q KEL+NGR AM+   G++T +++ G
Sbjct:  121 GVIEFLGEKIKERPGYVPGDILGAS--FWVDNSDEGWVMYQNKELNNGRLAMLAFVGILTQDILYG 184          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: B8CEQ3_THAPS (Pt17531-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEQ3_THAPS)

HSP 1 Score: 57.8 bits (138), Expect = 3.480e-8
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    4 GFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITG--GMPAFEQISR 79
            G +E++   I ++PGY+PGD +GA+  +  +     W  +Q KEL+NGR AM+ I G+V  ++  G  G   ++Q+ R
Sbjct:  121 GAIEWLGQQIKERPGYVPGDLLGAS--YWVDNSDEGWVMYQNKELNNGRLAMLAIVGMVYQDVFVGDYGDMMYKQLVR 196          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: B7FPL6_PHATC (Fucoxanthin chlorophyll a/c protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPL6_PHATC)

HSP 1 Score: 57.4 bits (137), Expect = 4.670e-8
Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    4 GFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLI 67
            G +E++   I ++PGY+PGD +GA+  +  +     W  +Q KEL+NGR AM+ IAG+   +++
Sbjct:  121 GAVEWLTEQIKKRPGYVPGDVLGAS--YWADNSDEGWVDYQNKELNNGRLAMLAIAGIYAQDIL 182          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: A0A7S4ETU1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETU1_CHRCT)

HSP 1 Score: 55.5 bits (132), Expect = 6.290e-8
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    2 FIGFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITGGMP 72
            FIGF+E +  + +Q+  Y PG+++G+    T E     W  +QT+EL+NGR AM    G++ H  +TG  P
Sbjct:   41 FIGFMEVMGQLNMQRADYEPGNFLGSGQWETSES----WDDYQTRELNNGRLAMFASIGMLAHAALTGKGP 107          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: A0A7S2RGF9_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2RGF9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 7.380e-8
Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    4 GFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLITG--GMPAFEQISR 79
            G +E++   I ++PGY+PGD +GA   +  +     W S+Q KE++NGR AM+  AG++  ++  G  G   ++Q+ R
Sbjct:  128 GAIEWLGQQIKERPGYVPGDLLGA--AYWVDDSDEGWVSYQNKEINNGRLAMLAFAGIMYQDVFVGDYGDMMYKQLVR 203          
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Match: A0A7S3P870_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P870_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.780e-8
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    4 GFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHNGRAAMMGIAGLVTHNLI 67
            G +E++   I  +PGY+PGD +GA   +  +     W  +Q KEL+NGR AM+ IAG+ T + +
Sbjct:  118 GAVEWLTEKIKARPGYVPGDLLGA--AYWVDNSDEGWVDYQNKELNNGRLAMLAIAGIYTQDAL 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig65.13129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8V9_ECTSI4.700e-4883.91Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
I2CPJ1_NANGC8.680e-1348.75Protein fucoxanthin chlorophyll a c protein n=1 Ta... [more]
A0A835YRG9_9STRA1.310e-1047.06Fucoxanthin chlorophyll a c protein n=1 Tax=Tribon... [more]
A0A7S2LPK3_9STRA1.220e-839.39Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5K7A5_FISSO1.270e-837.88Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8CEQ3_THAPS3.480e-835.90Pt17531-like protein n=1 Tax=Thalassiosira pseudon... [more]
B7FPL6_PHATC4.670e-837.50Fucoxanthin chlorophyll a/c protein n=2 Tax=Phaeod... [more]
A0A7S4ETU1_CHRCT6.290e-838.03Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2RGF9_9STRA7.380e-834.62Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A7S3P870_9STRA8.780e-839.06Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 1..82
e-value: 3.0E-8
score: 35.8
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 2..65
e-value: 1.0E-7
score: 32.6
NoneNo IPR availablePANTHERPTHR21649:SF63coord: 2..73
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 2..69
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig65contigP-fluviatile_contig65:271662..273087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig65.13129.1mRNA_P-fluviatile_contig65.13129.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig65 271662..273093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig65.13129.1 ID=prot_P-fluviatile_contig65.13129.1|Name=mRNA_P-fluviatile_contig65.13129.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=88bp
MFIGFLEYIISVIVQKPGYIPGDYVGANDLFTEEGPHSQWASFQTKELHN
GRAAMMGIAGLVTHNLITGGMPAFEQISRGVYTGGLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln