prot_P-fluviatile_contig65.13128.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig65.13128.1
Unique Name	prot_P-fluviatile_contig65.13128.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	301

Homology

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BLAST of mRNA_P-fluviatile_contig65.13128.1 vs. uniprot
Match: D7G8W0_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W0_ECTSI)

HSP 1 Score: 397 bits (1020), Expect = 1.410e-136
Identity = 199/299 (66.56%), Postives = 244/299 (81.61%), Query Frame = 0

Query:    2 TSEIFGDLTVKVVRGVDLQNITVFGTCNPYVLVKLRSSIDMLTTSVRESDANPSWQDTFTFRNASSADALQISLMEKEGTREGVVSVSEYIPATQWGFPGHGGGERVLEVVMPCGTPRVGTPNMGTIILRLQYRAELKFRAPFGVLKIAAAKTGVLTDKTKVDAVMDKVLDVVLKPVKLVGTASKRMTKAQKIAYGGGAAAVSTAAAGGLSMVLMALALPAVFMALLFLPLTVMGGMLFAVAMLVVLPPALTLGWLVFCSRPVQCRIWMPTLFWAICQSSLVHKALLQQSPRQTPGMEQ 300
            ++++FGDLTV+V+RG++LQN+  FGTCNPYVL+K+ SS +  TT VRESDANPSW +TF FRN +S DALQISLMEKEG+REGVVSV   + AT+WGFPG GGGERVLEV MPC T   G PNMGT++L+LQYRA+LKFRAPFGV+K AAAKT +LTDK K+D V+DKV++V+ KPV +    +KR+TKAQKI YGG AAAVS+A  GG SM L+ALA+P +FMALLFLPLT+MGG   AVAMLV++P  L LGW+V CSRPVQCR+WMP LFWA+C+S ++HKALLQ  P    G +Q
Sbjct:    3 SADVFGDLTVQVLRGINLQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIIYGGSAAAVSSAVGGGASMTLLALAVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRVWMPWLFWAMCKSPILHKALLQPPPHSPSGTQQ 301

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig65.13128.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig65.13128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8W0_ECTSI	1.410e-136	66.56	C2 domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 8..100 e-value: 5.3E-5 score: 32.6
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 7..80 e-value: 1.1E-10 score: 41.7
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..96 score: 10.974
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 7..95 e-value: 6.4E-12 score: 47.6
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 260..300
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 226..259
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 194..220
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 221..225
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..193
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 6..134
None	No IPR available	TMHMM	TMhelix		coord: 196..218
None	No IPR available	TMHMM	TMhelix		coord: 238..260

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig65	contig	P-fluviatile_contig65:256328..268897 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig65.13128.1	mRNA_P-fluviatile_contig65.13128.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig65 253858..270182 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig65.13128.1 ID=prot_P-fluviatile_contig65.13128.1|Name=mRNA_P-fluviatile_contig65.13128.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=301bp
MTSEIFGDLTVKVVRGVDLQNITVFGTCNPYVLVKLRSSIDMLTTSVRES
DANPSWQDTFTFRNASSADALQISLMEKEGTREGVVSVSEYIPATQWGFP
GHGGGERVLEVVMPCGTPRVGTPNMGTIILRLQYRAELKFRAPFGVLKIA
AAKTGVLTDKTKVDAVMDKVLDVVLKPVKLVGTASKRMTKAQKIAYGGGA
AAVSTAAAGGLSMVLMALALPAVFMALLFLPLTVMGGMLFAVAMLVVLPP
ALTLGWLVFCSRPVQCRIWMPTLFWAICQSSLVHKALLQQSPRQTPGMEQ
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR035892	C2_domain_sf