prot_P-fluviatile_contig65.13127.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig65.13127.1
Unique Nameprot_P-fluviatile_contig65.13127.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length246
Homology
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 1.120e-85
Identity = 133/145 (91.72%), Postives = 142/145 (97.93%), Query Frame = 0
Query:  101 MMAVSHAAAEEISNMEDVPELKEPVAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 245
            MMAVSHAAAEEISNMEDVP+LK+PVA++DFEALDIRVGRIVLAE +PDPDHGNKPSRKYLSLVVDLGNEKRRVVSA+R IVDVEDAIGKAVLMAANV+EET+LGLPSRGK+LS SNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL
Sbjct:    2 MMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 193 bits (491), Expect = 3.170e-59
Identity = 98/144 (68.06%), Postives = 119/144 (82.64%), Query Frame = 0
Query:  102 MAVSHAAAEEISNMEDVPELKEPVAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 245
            +AVS A  EE ++  DVP L+  V+V+ +EALDIRVGRIV AE VPDPDHGNKPSRKYLSLVV LGNE R ++S +RP+ DVE+AIGK+VL+ AN +EE +LG PSRG++L A+N+SK PMPRTLRTVLLGGG VPPGS V+GL
Sbjct:   16 VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 151 bits (381), Expect = 5.410e-42
Identity = 78/144 (54.17%), Postives = 111/144 (77.08%), Query Frame = 0
Query:  102 MAVSHAAAEEISNME--DVPELKEPVAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSKEPMPRTLRTVLLGGGGVPPGSAVS 243
            MA    A +E  N++  D+P +K+ V+ +  ++LDIRVGRI  A+ +PDP+H  KPSRKYL L+V++G EKR +V+A R I DVE++IG++VL+A NV+++TVLG+ S G++LSASN ++ P+PRTLRTVL  GGG+PPGS VS
Sbjct:   61 MAFVKGAVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 104 bits (259), Expect = 1.180e-23
Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 0
Query:  105 SHAAAEEISNMED---VPELKEPVAVSDFEALDIRVGRIVLAEPVPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSG 244
            +H    E+    D    P +K  V  S FE++D+RVG I  A+PV D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    V G+ S G +L+  N+   PMPR+ + +L G G +PPGS V G
Sbjct:   72 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 101 bits (251), Expect = 1.640e-22
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 0
Query:  105 SHAAAEEISNMED---VPELKEPVAVSDFEALDIRVGRIVLAEPVPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSKEPMPRTLRTVLLGGGGVPPGS 240
            +H    E+    D    P +K  V  S FE++D+RVG I  A+PV D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    V G+ S G +L+  N+   PMPR+ + +L G G +PPGS
Sbjct:   44 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 79.7 bits (195), Expect = 2.110e-13
Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 0
Query:  123 EPVAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSKEPMPRTL 226
            E +++ DF  +DIR+G+I+ AEP+P        S+K L L+VDLG EKR++VS I      ED +G+ V + AN+   T+ G+ SRG IL+A + +   +P T+
Sbjct:  559 EEISIEDFCRMDIRIGKILKAEPIPK-------SKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A0A3R7YHA2_9EURY (Methionine--tRNA ligase n=1 Tax=Methanocalculus sp. MSAO_Arc2 TaxID=2293855 RepID=A0A3R7YHA2_9EURY)

HSP 1 Score: 79.3 bits (194), Expect = 2.880e-13
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 0
Query:  125 VAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASN 216
            +++ DF  +D+R+GRI++AEPV       K S K L + VD+G+EKR+VV+ I P    E+ +GK V+M  N++  T+ G+ SRG IL+A +
Sbjct:  578 LSIDDFSRMDLRIGRILVAEPV-------KGSNKLLKIQVDIGSEKRQVVAGIGPFYTPEELVGKPVVMVVNLEPATIFGVESRGMILAAGD 662          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A1RWD3_THEPD (Methionyl-tRNA synthetase, beta subunit n=2 Tax=Thermofilum pendens TaxID=2269 RepID=A1RWD3_THEPD)

HSP 1 Score: 73.9 bits (180), Expect = 2.970e-13
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 0
Query:  125 VAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSK 219
            + +S+F+ LDIR+GRI+ AEP+       K S K L L VDLG E+R++V+ + P    E+ +GK V + AN+  +T++G  S+G +L+A    K
Sbjct:   11 ITISEFQRLDIRIGRILSAEPI-------KRSDKLLLLKVDLGTEQRQIVAGLAPYYKPEELVGKEVAVLANLQPKTIMGFVSQGMLLAAVEDGK 98          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A0A8A3S4I1_9EURY (Methionine--tRNA ligase n=3 Tax=Methanofollis TaxID=81416 RepID=A0A8A3S4I1_9EURY)

HSP 1 Score: 79.0 bits (193), Expect = 3.860e-13
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 0
Query:  104 VSHAAAEEISNMEDVPELKEPVAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSA 214
            V+ A  +E+  M +  +    +++ DF  +D+RV R++ AEPV       K S+K L + VDLG E+R+VVS I P  D ED +GK V+M AN+    + G+ S G IL+A
Sbjct:  547 VAEAKKKELKTMTEANQ----ISIDDFATMDLRVARVLAAEPV-------KGSKKLLKIQVDLGEEQRQVVSGIAPFYDPEDLVGKNVVMIANLKPAKIFGIESNGMILAA 646          
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Match: A0A2J4G932_9CREN (Methionine--tRNA ligase subunit beta n=1 Tax=Thermofilum sp. NZ13 TaxID=1980981 RepID=A0A2J4G932_9CREN)

HSP 1 Score: 73.2 bits (178), Expect = 4.830e-13
Identity = 37/95 (38.95%), Postives = 62/95 (65.26%), Query Frame = 0
Query:  125 VAVSDFEALDIRVGRIVLAEPVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEETVLGLPSRGKILSASNFSK 219
            V + DF+ LDIRVG+++ AEP+       + S K L L VD+G E R++V+ +RP    E+ +GK V++ AN++ +T++G  S+G +L+A +  K
Sbjct:    4 VKIEDFQKLDIRVGKVLHAEPI-------QKSEKLLLLKVDIGGETRQLVAGLRPHYKAEELVGKLVIVLANLEPKTLMGYVSQGMLLAAVDDEK 91          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig65.13127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI1.120e-8591.72tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA3.170e-5968.06tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP5.410e-4254.17Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA1.180e-2342.57tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA1.640e-2242.36Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
UPI001AE5ECDA2.110e-1340.38methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
A0A3R7YHA2_9EURY2.880e-1342.39Methionine--tRNA ligase n=1 Tax=Methanocalculus sp... [more]
A1RWD3_THEPD2.970e-1340.00Methionyl-tRNA synthetase, beta subunit n=2 Tax=Th... [more]
A0A8A3S4I1_9EURY3.860e-1339.64Methionine--tRNA ligase n=3 Tax=Methanofollis TaxI... [more]
A0A2J4G932_9CREN4.830e-1338.95Methionine--tRNA ligase subunit beta n=1 Tax=Therm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 119..241
e-value: 6.5E-21
score: 76.3
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 119..242
NoneNo IPR availablePANTHERPTHR11586:SF35coord: 119..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..37
score: 0.727
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 135..218
e-value: 5.0E-8
score: 32.9
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 129..243
score: 18.564
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 125..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig65contigP-fluviatile_contig65:249392..253571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig65.13127.1mRNA_P-fluviatile_contig65.13127.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig65 248006..253721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig65.13127.1 ID=prot_P-fluviatile_contig65.13127.1|Name=mRNA_P-fluviatile_contig65.13127.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=246bp
MHVHVQRNHISPSSPSLLLSAAFLLIVAAITSPACEAFLVSFRCPSAAAA
AAGTTTASTPTGAGAGGGAALSRVAPERPQWQQEQRRLRAAGGRRRGASA
MMAVSHAAAEEISNMEDVPELKEPVAVSDFEALDIRVGRIVLAEPVPDPD
HGNKPSRKYLSLVVDLGNEKRRVVSAIRPIVDVEDAIGKAVLMAANVDEE
TVLGLPSRGKILSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold