prot_P-fluviatile_contig65.13122.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig65.13122.1
Unique Nameprot_P-fluviatile_contig65.13122.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length93
Homology
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: A0A6H5KSG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG9_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.300e-26
Identity = 56/66 (84.85%), Postives = 60/66 (90.91%), Query Frame = 0
Query:   11 MGRAMASMELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREISAATGA 76
            MG AMA  ELSSLP+APS RDRLLRAGFRTL DVEGV+PLDLSRELKVSS EALAILR+I+AATGA
Sbjct:    6 MGPAMARTELSSLPIAPSNRDRLLRAGFRTLRDVEGVQPLDLSRELKVSSQEALAILRDIAAATGA 71          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: L8GZY9_ACACA (RAD51, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZY9_ACACA)

HSP 1 Score: 58.2 bits (139), Expect = 7.400e-8
Identity = 26/61 (42.62%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   19 ELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREISAATGASTA 79
            ++++LPL P+ ++++++AGFR + D +G +P++L++EL+V+  EAL+ILR I   T A+TA
Sbjct:    8 DITTLPLPPTLKNKIVQAGFRDVRDFDGYRPVELAKELRVTQEEALSILRTIKENTSATTA 68          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: A0A1U8ANS0_NELNU (DNA repair protein RAD51 homolog 3 isoform X1 n=4 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8ANS0_NELNU)

HSP 1 Score: 56.6 bits (135), Expect = 2.580e-7
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   18 MELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILR 68
            ME+SSLPL+PS+R +L+ AG+ TL  +  V   DL+R+L +S HEA+ IL+
Sbjct:    1 MEVSSLPLSPSQRGKLIAAGYTTLSSLSSVSAPDLARDLNISEHEAIEILK 51          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: D5A8N2_PICSI (RECA_2 domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5A8N2_PICSI)

HSP 1 Score: 55.8 bits (133), Expect = 4.860e-7
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   18 MELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILR 68
            ME   LPLAPS R RL+ AG+RTL     + PLDL+R++ VSS EAL IL+
Sbjct:    1 METICLPLAPSHRARLVSAGYRTLDSFNNLSPLDLARDIGVSSEEALDILK 51          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: A0A1S3HA83_LINUN (DNA repair protein RAD51 homolog 3-like n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HA83_LINUN)

HSP 1 Score: 55.5 bits (132), Expect = 6.810e-7
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   19 ELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREI 70
            ELSS PL P  R +L+ AGF T+GD++ V+P++LS+EL +S   AL IL+ I
Sbjct:    7 ELSSFPLPPIYRSKLVAAGFITVGDIKDVRPVELSKELSISKEAALDILQTI 58          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: UPI0014029AC0 (LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 3 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014029AC0)

HSP 1 Score: 55.1 bits (131), Expect = 9.700e-7
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   22 SLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREI 70
            S PL P  ++RL  AGF T GD+ GVKP +LSREL VS  EAL IL+ +
Sbjct:    7 SFPLPPRHKERLTAAGFETAGDLVGVKPSELSRELGVSKEEALDILQTV 55          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: A0A3S3QPA1_9MAGN (DNA repair protein RAD51 3 isoform X1 n=2 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QPA1_9MAGN)

HSP 1 Score: 53.9 bits (128), Expect = 2.340e-6
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   18 MELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREI 70
            ME+SSLPL+PS R +LL AG+  L  +  + P +L+R L +S+HEA  IL+ +
Sbjct:    1 MEISSLPLSPSLRSKLLSAGYTNLCSLSSISPPELARALNISNHEAAGILKVV 53          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: A0A6P4XU31_BRABE (DNA repair protein RAD51 homolog 3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XU31_BRABE)

HSP 1 Score: 53.1 bits (126), Expect = 4.440e-6
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   17 SMELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREI 70
            S  + S PL P  + +LL  GF T+ D+E +KP++LS+ELK+S  EAL ILR +
Sbjct:    2 SRHVGSYPLPPYLKTKLLAGGFSTVEDLEDLKPVELSKELKISPEEALEILRVV 55          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: A0A200R9Z2_9MAGN (DNA recombination and repair protein Rad51 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R9Z2_9MAGN)

HSP 1 Score: 52.4 bits (124), Expect = 5.820e-6
Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   18 MELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILR 68
            ME+SSLPL+P++R +L+ AG+ TL  +  + P DL+R+L VS  EA  IL+
Sbjct:    1 MEVSSLPLSPTQRAKLISAGYTTLSSLSSLSPPDLARDLNVSHQEAQEILK 51          
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Match: UPI0016036942 (DNA repair protein RAD51 homolog 3-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016036942)

HSP 1 Score: 52.4 bits (124), Expect = 8.290e-6
Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   17 SMELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPLDLSRELKVSSHEALAILREI 70
            S  + S P+ P  +++L+ AGF T  D+E VKP++LS+ELK++  EAL +LR +
Sbjct:    2 SRHIGSYPIPPYLKNKLITAGFSTAEDLEDVKPVELSKELKITPAEALEVLRVV 55          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig65.13122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KSG9_9PHAE2.300e-2684.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L8GZY9_ACACA7.400e-842.62RAD51, putative n=1 Tax=Acanthamoeba castellanii s... [more]
A0A1U8ANS0_NELNU2.580e-750.98DNA repair protein RAD51 homolog 3 isoform X1 n=4 ... [more]
D5A8N2_PICSI4.860e-756.86RECA_2 domain-containing protein n=1 Tax=Picea sit... [more]
A0A1S3HA83_LINUN6.810e-751.92DNA repair protein RAD51 homolog 3-like n=2 Tax=Li... [more]
UPI0014029AC09.700e-757.14LOW QUALITY PROTEIN: DNA repair protein RAD51 homo... [more]
A0A3S3QPA1_9MAGN2.340e-647.17DNA repair protein RAD51 3 isoform X1 n=2 Tax=Cinn... [more]
A0A6P4XU31_BRABE4.440e-648.15DNA repair protein RAD51 homolog 3-like n=3 Tax=Br... [more]
A0A200R9Z2_9MAGN5.820e-649.02DNA recombination and repair protein Rad51 n=1 Tax... [more]
UPI00160369428.290e-644.44DNA repair protein RAD51 homolog 3-like isoform X1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig65contigP-fluviatile_contig65:164973..165616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig65.13122.1mRNA_P-fluviatile_contig65.13122.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig65 162990..165616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig65.13122.1 ID=prot_P-fluviatile_contig65.13122.1|Name=mRNA_P-fluviatile_contig65.13122.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=93bp
MNKSAPPPAAMGRAMASMELSSLPLAPSKRDRLLRAGFRTLGDVEGVKPL
DLSRELKVSSHEALAILREISAATGASTAGAAAGGSAGAAGPG
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