prot_P-fluviatile_contig65.13116.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig65.13116.1
Unique Nameprot_P-fluviatile_contig65.13116.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length364
Homology
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BLAST of mRNA_P-fluviatile_contig65.13116.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 8.060e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = 0 
Query:   36 VINMMNAMLTALDCACSALM-LAAAGYSG-AATSTFNDVAFILQLVALIALIIPVYIDTGVSLTIVITEKMRRMCAARDDDGAGALALTVEAQRAADDERQERRYVGRFARQNWPHFWCSMVRYNVVAAVSDIREGLRAPG 174
            VIN M A L  +D  C AL+ ++A+ + G AA    + V  +LQL AL ALIIP+YIDT + L   I  ++++               T       + E++E  +V  F R++WP  WC+M+  N+ A  SD REG+R PG
Sbjct: 1236 VINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKS------------TTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPPG 1364
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BLAST of mRNA_P-fluviatile_contig65.13116.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 6.120e-8
Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:   36 VINMMNAMLTALDCACSALMLAAAGYSGAATST---FNDVAFILQLVALIALIIPVYIDTGVSLTIVITEKMRRMCAARD-DDGAGALALTVEAQRAADDERQERRYVGRFARQNWPHFWCSMVRYNVVAAVSDIREGLR 171
            +IN M A LT +D A S  MLA   +    TS     +    +LQLVAL+ALIIP+YID    +   I EK+R +  +   DDG           R  ++ ++ER+++  +  + W   WC M+  NV+A V+D   G R
Sbjct:  455 IINTMGACLTLIDAA-SMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDG-----------RTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTR 582
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig65.13116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN93_ECTSI8.060e-1336.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1L9_ECTSI6.120e-835.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..364
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..73
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig65contigP-fluviatile_contig65:66542..68532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig65.13116.1mRNA_P-fluviatile_contig65.13116.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig65 66540..68532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig65.13116.1 ID=prot_P-fluviatile_contig65.13116.1|Name=mRNA_P-fluviatile_contig65.13116.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=364bp
MMTASEEFFSNGIPFTTVPCYLPFFRTFLCCRGRRVINMMNAMLTALDCA
CSALMLAAAGYSGAATSTFNDVAFILQLVALIALIIPVYIDTGVSLTIVI
TEKMRRMCAARDDDGAGALALTVEAQRAADDERQERRYVGRFARQNWPHF
WCSMVRYNVVAAVSDIREGLRAPGGGGSALRRRRTSCSRSKASPRTLNGG
SAGGSWCCSRQLQCCGVSAAPTVPVPTWLPSTCVGVEWDRSKSDALHDGG
VGRGGGGGRGGKLSQRQRARQGQLQEMQQHRRDWTLTPKLRAVGRGARSW
GGETMLMSTRGSDAQRLPCPAGTPHRRGGGGGGGGSEVPKMVGKMDSFCE
RGMNGANKGMDSGS
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