prot_P-fluviatile_contig63.13027.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig63.13027.1
Unique Nameprot_P-fluviatile_contig63.13027.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length611
Homology
BLAST of mRNA_P-fluviatile_contig63.13027.1 vs. uniprot
Match: A0A6H5L6N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N1_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 7.460e-43
Identity = 273/572 (47.73%), Postives = 307/572 (53.67%), Query Frame = 0
Query:   40 SELHELRAAGYLILSVEALAVAWCWPRLFPLRRRWRSVDGGXXXXXXXSRLRQHRSGS----GGCSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAEWGGYSRSRRGSLISSSRRSEDSSECWGSEVSVGLGAGGGMGGRCSEAGRSSAPSSMRSFGGRSSNRAEWVSLSGGGCGGGGRDSDGVSRLEALTEQPKAPIDGKDMRAALLQKTRPAARRYARPLLLVLLTLSASYLSTCLLISLSSLGSPPXXXXXXXXXXXXXXXXSGGGGEAETRALAKLRKEEEATAAKAERKAXXXXXXXXXXXXXXXXXXXXXXEAEAERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLEQGDSLGSNRSLSNGSTVLRVMPNGDLVLTDDGNTVWAVEGSKKRRVHSVAGWIWRKIRRQQKVERPCAECRLTVAPSGRVELRERQKLLWSAGLDKRKEKRAKXXXXXXXXXXXXXXSPQQYRGQASSGGAGEAFRLVVTNSGNVVFERGGSEVVWKAL 607
            S+LH L AAGYLILSVEAL V + WPRL+P   R RS    XXXXXXX       SGS    GG +                                 P+    G    +  G    SSR S DSS  W S+        GG+ G  SEAGRSSAPSS+ S GGR                       G   LE   E+  A +DG D+R  L  K+R    RYARP+LLVLLTLSASYL+T LL+S+S L                         E E R   +  +EE A   + E KA       XXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXX           XXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +TLEQ  S+G   +L+NGST LRVMPNGDLVL D+G  VW   GSKKRR  S+ GWIWRKIRRQQ V RPC  CRLTVAP GRVELRE  KLLWS G   +++K+A+                    G   SG    AFRLV+T+ GN + ER GSEVVWKAL
Sbjct:   14 SDLHPLSAAGYLILSVEALVVTFWWPRLYPPAGRKRSESSXXXXXXXXXSRHLGSSGSTVFFGGAT---------------------------------PSPTINGQRFNTNGGKA--SSRWSGDSSGWWESD--------GGLEG-LSEAGRSSAPSSLVSIGGRXXXXXXXXXXXXXXX-----XFFGEEPLETFPEKRSA-VDG-DVRVPLPSKSR---MRYARPVLLVLLTLSASYLTTWLLLSIS-LARISTAVDEGAMSNTRDIEAMKKAAEVERRV--REEREEAANRMELEEKALQEAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERRAREEQKAXXXXXXXXXQAARLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMA---ATLEQRRSIGLEDALTNGSTELRVMPNGDLVLADNGRPVWTARGSKKRR--SLVGWIWRKIRRQQAV-RPCTACRLTVAPEGRVELREEGKLLWSGG---QRQKKARQQKRQTTQQRKRVPRANDREGADGSG----AFRLVITDDGNAILEREGSEVVWKAL 515          
BLAST of mRNA_P-fluviatile_contig63.13027.1 vs. uniprot
Match: D7G6H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H1_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.630e-39
Identity = 268/572 (46.85%), Postives = 299/572 (52.27%), Query Frame = 0
Query:   40 SELHELRAAGYLILSVEALAVAWCWPRLFPLRRRWRSVDGGXXXXXXXSRLRQHRSGS----GGCSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAEWGGYSRSRRGSLISSSRRSEDSSECWGSEVSVGLGAGGGMGGRCSEAGRSSAPSSMRSFGGRSSNRAEWVSLSGGGCGGGGRDSDGVSRLEALTEQPKAPIDGKDMRAALLQKTRPAARRYARPLLLVLLTLSASYLSTCLLISLSSLGSPPXXXXXXXXXXXXXXXXSGGGGEAETRALAKLRKEEEATAAKAERKAXXXXXXXXXXXXXXXXXXXXXXEAEAERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLEQGDSLGSNRSLSNGSTVLRVMPNGDLVLTDDGNTVWAVEGSKKRRVHSVAGWIWRKIRRQQKVERPCAECRLTVAPSGRVELRERQKLLWSAGLDKRKEKRAKXXXXXXXXXXXXXXSPQQYRGQASSGGAGEAFRLVVTNSGNVVFERGGSEVVWKAL 607
            S+LH LRAAGYLILSVEAL V + WPRL+P   R RS                 RSGS    GG +                                 P+    G  S +  G    SSR S DSS  W SE        GG+ G  SEAGRSSAPSS+ S GGR   R     L  G  GGGG    G   LE   E+  A +DG DMR  L  K+R    RYARP+L+VLLTLSASYL+T LL+S+SS                       G   AE     +  +EE A   + E KA          XXXXXXXXXXXX                   XXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +TLEQ  S+G   +LSNGST LRVMPNGDLVL D+G  VW   GSKKRR  S+ GWIWRKIRRQQ                   ELRE  KLLWS G   +++K   XXXXXXXXX     S     G   S    + FRL+VT+ GN + ER GSEVVWKAL
Sbjct:   14 SDLHPLRAAGYLILSVEALTVTFWWPRLYPPAGRKRSESSARHRRQHRRSRHLSRSGSADLFGGAT---------------------------------PSPTINGQRSNTNGGKA--SSRWSGDSSGWWESE--------GGLEG-LSEAGRSSAPSSLVSIGGR---RRRAARLQSGQSGGGGFL--GEEPLETFPEKRSA-VDG-DMRVPLPPKSR---MRYARPVLIVLLTLSASYLTTWLLLSISSARVSTAVDEDAMSSTRDIVAMKKG---AEMERRTREEREEGARRMELEEKALREAVAAKEAXXXXXXXXXXXXXXXXXXXDAEEKRLEEARAXXXXXXXXXXXXXXXXXXXXXXXXXXQAARLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKMAATLEQTRSIGLEDALSNGSTELRVMPNGDLVLADNGRPVWTARGSKKRR--SLVGWIWRKIRRQQ------------------AELREEGKLLWSGG---QRQKXXXXXXXXXXXXRKRVPSANDREGADGS----DMFRLIVTDDGNAILEREGSEVVWKAL 501          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig63.13027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6N1_9PHAE7.460e-4347.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6H1_ECTSI1.630e-3946.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 323..431
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 285..610
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..65
NoneNo IPR availableTMHMMTMhelixcoord: 264..286
IPR036426Bulb-type lectin domain superfamilySUPERFAMILY51110alpha-D-mannose-specific plant lectinscoord: 443..486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig63contigP-fluviatile_contig63:873102..879559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig63.13027.1mRNA_P-fluviatile_contig63.13027.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig63 873102..879559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig63.13027.1 ID=prot_P-fluviatile_contig63.13027.1|Name=mRNA_P-fluviatile_contig63.13027.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=611bp
HNNKGRGREVLLSLRGDFPLTKHSMVAVGVAFEAARAELSELHELRAAGY
LILSVEALAVAWCWPRLFPLRRRWRSVDGGGGGGGGGSRLRQHRSGSGGC
SSGSGHRRSSGSNQRGLAASAKAVAAAAKAPAAAPAAAEWGGYSRSRRGS
LISSSRRSEDSSECWGSEVSVGLGAGGGMGGRCSEAGRSSAPSSMRSFGG
RSSNRAEWVSLSGGGCGGGGRDSDGVSRLEALTEQPKAPIDGKDMRAALL
QKTRPAARRYARPLLLVLLTLSASYLSTCLLISLSSLGSPPSSPLGSSTG
SRGRRGPSGGGGEAETRALAKLRKEEEATAAKAERKAVAAERRAAEAERR
AAEAERRAAEAEAERKRAKAREEEAENELRRRREQQQQQQEKEQRVWAEE
EAKARAQAEAKEEEERRRREGREARVRAEAKKWAFSSASASASASTLEQG
DSLGSNRSLSNGSTVLRVMPNGDLVLTDDGNTVWAVEGSKKRRVHSVAGW
IWRKIRRQQKVERPCAECRLTVAPSGRVELRERQKLLWSAGLDKRKEKRA
KKGAAKRAAAGGAGGSPQQYRGQASSGGAGEAFRLVVTNSGNVVFERGGS
EVVWKALLDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036426Bulb-type_lectin_dom_sf