prot_P-fluviatile_contig62.12951.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig62.12951.1
Unique Nameprot_P-fluviatile_contig62.12951.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length231
Homology
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BLAST of mRNA_P-fluviatile_contig62.12951.1 vs. uniprot
Match: D7G7I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I1_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 2.970e-59
Identity = 112/138 (81.16%), Postives = 121/138 (87.68%), Query Frame = 0 
Query:    1 MATAAARSGGGDAPST-GVNQRAVDFRRQLDEHTRTLVESFGRLLRSAKITNPQSVTREEFQVNVATASLATAGEGLLRQIREVKLAVMLQDEAAMDREVDQALARIAGERAELEKELEALSNELKAAYAVAATAGRG 137
            M+TAA+R+GG  + +T  VNQRAVDFRRQLD HTRTLVESFG L+R AKITNPQS  REEFQVNVATASLATAGEGLLRQIRE+KLAVMLQDEAAMD EVDQALA+IA ER ELEKELEALSN+LK AYA AA AG G
Sbjct:    1 MSTAASRAGGSSSGATPAVNQRAVDFRRQLDAHTRTLVESFGGLVRLAKITNPQSTEREEFQVNVATASLATAGEGLLRQIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAGGG 138
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BLAST of mRNA_P-fluviatile_contig62.12951.1 vs. uniprot
Match: A0A6H5JD54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD54_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 3.170e-47
Identity = 94/110 (85.45%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   28 QLDEHTRTLVESFGRLLRSAKITNPQSVTREEFQVNVATASLATAGEGLLRQIREVKLAVMLQDEAAMDREVDQALARIAGERAELEKELEALSNELKAAYAVAATAGRG 137
            +LD HTRTLVESFG L+R AKITNPQS  REEFQVNVATASLATAGEGLLRQIRE+KLAVMLQDEAAMD EVDQALA+IA ER ELEKELEALSNELK AYA AA AG G
Sbjct:   83 RLDAHTRTLVESFGGLVRLAKITNPQSTEREEFQVNVATASLATAGEGLLRQIRELKLAVMLQDEAAMDLEVDQALAKIATERKELEKELEALSNELKGAYAKAAMAGGG 192
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BLAST of mRNA_P-fluviatile_contig62.12951.1 vs. uniprot
Match: A0A7S2UVX4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.040e-9
Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 0 
Query:   23 VDFRRQLDEHTRTLVESFGRLLRSAKITNPQSVTREEFQVNVATASLATAGEGLLRQIREVKLAVMLQDEAAMDREVDQALARIAGERAELEKELEALSNELKAAY 128
            ++F RQLD +   LVE++G +++SAK+ +   +  +  Q+   T S+  A E L+ Q+RE+KLA+ LQD  A++ +   A A +       +  +E L  +LKAAY
Sbjct:    6 LNFHRQLDANIARLVEAYGGMIQSAKVGDKTRLHLDALQLTSHTISIEQAAESLIGQVRELKLALALQDAEALEADAQHARATLEERYNGSKNHVEELREQLKAAY 111
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig62.12951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7I1_ECTSI2.970e-5981.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD54_9PHAE3.170e-4785.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UVX4_9STRA2.040e-934.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..130
IPR009332Mediator of RNA polymerase II transcription subunit 22PFAMPF06179Med22coord: 28..125
e-value: 2.8E-12
score: 46.8
IPR009332Mediator of RNA polymerase II transcription subunit 22PANTHERPTHR12434FAMILY NOT NAMEDcoord: 19..126
IPR038427MED22 superfamilyGENE3D1.20.58.1600coord: 12..134
e-value: 1.4E-14
score: 56.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig62contigP-fluviatile_contig62:674954..678739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig62.12951.1mRNA_P-fluviatile_contig62.12951.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig62 674773..680343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig62.12951.1 ID=prot_P-fluviatile_contig62.12951.1|Name=mRNA_P-fluviatile_contig62.12951.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=231bp
MATAAARSGGGDAPSTGVNQRAVDFRRQLDEHTRTLVESFGRLLRSAKIT
NPQSVTREEFQVNVATASLATAGEGLLRQIREVKLAVMLQDEAAMDREVD
QALARIAGERAELEKELEALSNELKAAYAVAATAGRGGAVASAERRSEVA
PAASGGAGTAPSAAAPSAAAPAAPAAPAAAPSAIPPAAGRNEQAAGQNPV
GGSLGDSEVNAAAQEGGSTMAAATGGQDSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009332Med22
IPR038427MED22_sf