prot_P-fluviatile_contig62.12936.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig62.12936.1
Unique Nameprot_P-fluviatile_contig62.12936.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length371
Homology
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BLAST of mRNA_P-fluviatile_contig62.12936.1 vs. uniprot
Match: A0A6H5KE00_9PHAE (YTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE00_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.690e-22
Identity = 106/220 (48.18%), Postives = 116/220 (52.73%), Query Frame = 0 
Query:   15 GGWI-----ERAGGGFSALSAEANGFVPSNFTPAGGVTGVGEVVGGGGGEMSTGPANNASSQGAGAASDASPXXXXXXAMAAGGDMPALPSASSGTAGAGQPNGAQQ------------------------QKRTTSWADIVRPEGFRSSDHKTPPRPATKASGTQSXXXXXXXXXXXXXSNDIAVMLNAPGAFPAAVPSSYSSGRVGYSGLSVGPFAAS 205
            GGWI     ER GGGFS LSAEANGFVPSNFTPA GV G GEV                             XXXXXX      DMPALP+A S TA A                                QKRTTSWADIVRPEGFRSSD K     +  A+ + + XXXXXXXX    SN+++ MLN P AFPA  P ++S G VGYSGLS GPFAAS
Sbjct:   73 GGWIDGGLRERGGGGFSGLSAEANGFVPSNFTPASGVAGGGEVX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMPALPTAPSSTATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQKRTTSWADIVRPEGFRSSDQKA----SAAAAPSSTKXXXXXXXXAAATSNEVSAMLNTPEAFPA--PGAFSGGGVGYSGLSAGPFAAS 281
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BLAST of mRNA_P-fluviatile_contig62.12936.1 vs. uniprot
Match: D7G0F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F2_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.440e-17
Identity = 62/89 (69.66%), Postives = 68/89 (76.40%), Query Frame = 0 
Query:  117 QKRTTSWADIVRPEGFRSSDHKTPPRPATKASGTQSXXXXXXXXXXXXXSNDIAVMLNAPGAFPAAVPSSYSSGRVGYSGLSVGPFAAS 205
            QKRTTSWADIVRPEGFRSSD K     A  A+   + XXXXXXXXXXX SN+++ MLN PGAFPA  P +YS G VGYSGLS GPFAAS
Sbjct:    7 QKRTTSWADIVRPEGFRSSDQKA--AAAAGAAPRSTKXXXXXXXXXXXTSNEVSAMLNTPGAFPA--PGAYSGGGVGYSGLSAGPFAAS 91
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig62.12936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KE00_9PHAE1.690e-2248.18YTH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0F2_ECTSI1.440e-1769.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig62contigP-fluviatile_contig62:496054..500118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig62.12936.1mRNA_P-fluviatile_contig62.12936.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig62 496054..500140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig62.12936.1 ID=prot_P-fluviatile_contig62.12936.1|Name=mRNA_P-fluviatile_contig62.12936.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=371bp
MQGEMQQSQQPSSGGGWIERAGGGFSALSAEANGFVPSNFTPAGGVTGVG
EVVGGGGGEMSTGPANNASSQGAGAASDASPTPAGAAAMAAGGDMPALPS
ASSGTAGAGQPNGAQQQKRTTSWADIVRPEGFRSSDHKTPPRPATKASGT
QSSSSTSSSSAAAAASNDIAVMLNAPGAFPAAVPSSYSSGRVGYSGLSVG
PFAASSPLPLGGSGDGGGVSEGLESGGNGDTSRGLPAAESEGDGGSDKAP
VGTTSDQAAVSGDGYGGFAGALNGGYGNSGGNDYLPYHQPHQQQYSQQQA
AGVHPGGVGGGGMMDGMGGNNGIYPAAGVAGAGAAGGALSQLPYGSSHAG
AQGGGGGGGGEAAHAGAAVVS
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